RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 CERCAMQ5T4B2 595 aa11.74□□□□□ -0.53
RAB5C-208ENST00000551338 C1orf53Q5VUE5 145 aa11.74□□□□□ -0.53
RAB5C-208ENST00000551338 RAP1GAP2Q684P5 730 aa11.74□□□□□ -0.53
RAB5C-208ENST00000551338 NADSYN1Q6IA69 706 aa11.74□□□□□ -0.53
RAB5C-208ENST00000551338 NAPEPLDQ6IQ20 393 aa11.74□□□□□ -0.53
RAB5C-208ENST00000551338 FBXL22Q6P050 247 aa11.74□□□□□ -0.53
RAB5C-208ENST00000551338 ZNF449Q6P9G9 518 aa11.74□□□□□ -0.53
RAB5C-208ENST00000551338 TMEM135Q86UB9 458 aa11.74□□□□□ -0.53
RAB5C-208ENST00000551338 UMODL1-AS1Q8N2C9 162 aa11.74□□□□□ -0.53
RAB5C-208ENST00000551338 SPATA22Q8NHS9 363 aa11.74□□□□□ -0.53
RAB5C-208ENST00000551338 CDKL2Q92772 493 aa11.74□□□□□ -0.53
RAB5C-208ENST00000551338 IGSF8Q969P0 613 aa11.74□□□□□ -0.53
RAB5C-208ENST00000551338 IGSF21Q96ID5 467 aa11.74□□□□□ -0.53
RAB5C-208ENST00000551338 BTN2A3PQ96KV6 586 aa11.74□□□□□ -0.53
RAB5C-208ENST00000551338 FAM111AQ96PZ2 611 aa11.74□□□□□ -0.53
RAB5C-208ENST00000551338 SRPK1Q96SB4 655 aaKnown RBP11.74□□□□□ -0.53
RAB5C-208ENST00000551338 TBL1YQ9BQ87 522 aa11.74□□□□□ -0.53
RAB5C-208ENST00000551338 HERC2P3Q9BVR0 1158 aa11.74□□□□□ -0.53
RAB5C-208ENST00000551338 UBE2OQ9C0C9 1292 aaKnown RBP11.74□□□□□ -0.53
RAB5C-208ENST00000551338 ZYG11BQ9C0D3 744 aa11.74□□□□□ -0.53
RAB5C-208ENST00000551338 VPS11Q9H270 941 aa11.74□□□□□ -0.53
RAB5C-208ENST00000551338 KDM4CQ9H3R0 1056 aa11.74□□□□□ -0.53
RAB5C-208ENST00000551338 CCSER2Q9H7U1 834 aa11.74□□□□□ -0.53
RAB5C-208ENST00000551338 ABCF3Q9NUQ8 709 aa11.74□□□□□ -0.53
RAB5C-208ENST00000551338 PCMTD2Q9NV79 361 aa11.74□□□□□ -0.53
RAB5C-208ENST00000551338 PHTF1Q9UMS5 762 aa11.74□□□□□ -0.53
RAB5C-208ENST00000551338 SOX13Q9UN79 622 aa11.74□□□□□ -0.53
RAB5C-208ENST00000551338 ARL2BPQ9Y2Y0 163 aa11.74□□□□□ -0.53
RAB5C-208ENST00000551338 STARD13Q9Y3M8 1113 aa11.74□□□□□ -0.53
RAB5C-208ENST00000551338 PSAT1Q9Y617 370 aa11.74□□□□□ -0.53
RAB5C-208ENST00000551338 FAM237BA0A1B0GVD1 139 aa11.73□□□□□ -0.53
RAB5C-208ENST00000551338 WDR91A4D1P6 747 aa11.73□□□□□ -0.53
RAB5C-208ENST00000551338 DRGXA6NNA5 263 aa11.73□□□□□ -0.53
RAB5C-208ENST00000551338 ATP9BO43861 1147 aa11.73□□□□□ -0.53
RAB5C-208ENST00000551338 SEC24AO95486 1093 aa11.73□□□□□ -0.53
RAB5C-208ENST00000551338 MT-CYBP00156 380 aaPredicted RBP11.73□□□□□ -0.53
RAB5C-208ENST00000551338 HMBSP08397 361 aa11.73□□□□□ -0.53
RAB5C-208ENST00000551338 ERVK-10P10266 1014 aa11.73□□□□□ -0.53
RAB5C-208ENST00000551338 DNAJB2P25686 324 aa11.73□□□□□ -0.53
RAB5C-208ENST00000551338 OR1D2P34982 312 aa11.73□□□□□ -0.53
RAB5C-208ENST00000551338 MAGEA9P43362 315 aa11.73□□□□□ -0.53
RAB5C-208ENST00000551338 SERPINB4P48594 390 aa11.73□□□□□ -0.53
RAB5C-208ENST00000551338 LIG3P49916 1009 aa11.73□□□□□ -0.53
RAB5C-208ENST00000551338 NDST2P52849 883 aa11.73□□□□□ -0.53
RAB5C-208ENST00000551338 GEMP55040 296 aa11.73□□□□□ -0.53
RAB5C-208ENST00000551338 CDH17Q12864 832 aa11.73□□□□□ -0.53
RAB5C-208ENST00000551338 SMAD1Q15797 465 aaKnown RBP11.73□□□□□ -0.53
RAB5C-208ENST00000551338 ANKRD20A4Q4UJ75 823 aa11.73□□□□□ -0.53
RAB5C-208ENST00000551338 RNF43Q68DV7 783 aa11.73□□□□□ -0.53
RAB5C-208ENST00000551338 OTOAQ7RTW8 1153 aa11.73□□□□□ -0.53
RAB5C-208ENST00000551338 TFAP2DQ7Z6R9 452 aa11.73□□□□□ -0.53
RAB5C-208ENST00000551338 LINC00523Q86TU6 105 aa11.73□□□□□ -0.53
RAB5C-208ENST00000551338 MIB1Q86YT6 1006 aa11.73□□□□□ -0.53
RAB5C-208ENST00000551338 C10orf67Q8IYJ2 551 aa11.73□□□□□ -0.53
RAB5C-208ENST00000551338 SLC39A11Q8N1S5 342 aa11.73□□□□□ -0.53
RAB5C-208ENST00000551338 DNAAF3Q8N9W5 541 aa11.73□□□□□ -0.53
RAB5C-208ENST00000551338 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.73□□□□□ -0.53
RAB5C-208ENST00000551338 GBF1Q92538 1859 aa11.73□□□□□ -0.53
RAB5C-208ENST00000551338 PTPRN2Q92932 1015 aa11.73□□□□□ -0.53
RAB5C-208ENST00000551338 FATE1Q969F0 183 aa11.73□□□□□ -0.53
RAB5C-208ENST00000551338 MYEOVQ96EZ4 313 aa11.73□□□□□ -0.53
RAB5C-208ENST00000551338 HMCESQ96FZ2 354 aa11.73□□□□□ -0.53
RAB5C-208ENST00000551338 CEP295NLQ96MC4 621 aa11.73□□□□□ -0.53
RAB5C-208ENST00000551338 FICDQ9BVA6 458 aa11.73□□□□□ -0.53
RAB5C-208ENST00000551338 PITPNM3Q9BZ71 974 aa11.73□□□□□ -0.53
RAB5C-208ENST00000551338 ACTR5Q9H9F9 607 aaPredicted RBP11.73□□□□□ -0.53
RAB5C-208ENST00000551338 RC3H2Q9HBD1 1191 aaKnown RBP11.73□□□□□ -0.53
RAB5C-208ENST00000551338 RBM22Q9NW64 420 aaKnown RBP eCLIP11.73□□□□□ -0.53
RAB5C-208ENST00000551338 IL1RAPL1Q9NZN1 696 aa11.73□□□□□ -0.53
RAB5C-208ENST00000551338 IPO11Q9UI26 975 aaKnown RBP11.73□□□□□ -0.53
RAB5C-208ENST00000551338 MAGED2Q9UNF1 606 aaPredicted RBP11.73□□□□□ -0.53
RAB5C-208ENST00000551338 HBS1LQ9Y450 684 aaKnown RBP11.73□□□□□ -0.53
RAB5C-208ENST00000551338 MTCL1Q9Y4B5 1905 aaKnown RBP11.72□□□□□ -0.53
RAB5C-208ENST00000551338 TLR5O60602 858 aa11.72□□□□□ -0.53
RAB5C-208ENST00000551338 ANXA9O76027 345 aa11.72□□□□□ -0.53
RAB5C-208ENST00000551338 TPH1P17752 444 aa11.72□□□□□ -0.53
RAB5C-208ENST00000551338 TACR2P21452 398 aa11.72□□□□□ -0.53
RAB5C-208ENST00000551338 NMBRP28336 390 aa11.72□□□□□ -0.53
RAB5C-208ENST00000551338 RFC2P35250 354 aa11.72□□□□□ -0.53
RAB5C-208ENST00000551338 ADRA1AP35348 466 aa11.72□□□□□ -0.53
RAB5C-208ENST00000551338 GP5P40197 560 aa11.72□□□□□ -0.53
RAB5C-208ENST00000551338 ALDH7A1P49419 539 aaKnown RBP11.72□□□□□ -0.53
RAB5C-208ENST00000551338 ACTN3Q08043 901 aaPredicted RBP11.72□□□□□ -0.53
RAB5C-208ENST00000551338 IKBKEQ14164 716 aa11.72□□□□□ -0.53
RAB5C-208ENST00000551338 ANO4Q32M45 955 aa11.72□□□□□ -0.53
RAB5C-208ENST00000551338 MROH9Q5TGP6 573 aa11.72□□□□□ -0.53
RAB5C-208ENST00000551338 DENND5AQ6IQ26 1287 aa11.72□□□□□ -0.53
RAB5C-208ENST00000551338 KDELC1Q6UW63 502 aa11.72□□□□□ -0.53
RAB5C-208ENST00000551338 TRPM8Q7Z2W7 1104 aa11.72□□□□□ -0.53
RAB5C-208ENST00000551338 CIR1Q86X95 450 aaPredicted RBP11.72□□□□□ -0.53
RAB5C-208ENST00000551338 LRRC49Q8IUZ0 686 aa11.72□□□□□ -0.53
RAB5C-208ENST00000551338 ANKLE1Q8NAG6 615 aa11.72□□□□□ -0.53
RAB5C-208ENST00000551338 IPMKQ8NFU5 416 aa11.72□□□□□ -0.53
RAB5C-208ENST00000551338 ACMSDQ8TDX5 336 aa11.72□□□□□ -0.53
RAB5C-208ENST00000551338 C10orf82Q8WW14 230 aa11.72□□□□□ -0.53
RAB5C-208ENST00000551338 ZNF689Q96CS4 500 aaPredicted RBP11.72□□□□□ -0.53
RAB5C-208ENST00000551338 MFSD3Q96ES6 412 aa11.72□□□□□ -0.53
RAB5C-208ENST00000551338 RMDN2Q96LZ7 410 aa11.72□□□□□ -0.53
RAB5C-208ENST00000551338 RBBP8Q99708 897 aa11.72□□□□□ -0.53
RAB5C-208ENST00000551338 CPNE1Q99829 537 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms