RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 CASD1Q96PB1 797 aa5.38□□□□□ -1.55
SCAF11-214ENST00000550893 TGS1Q96RS0 853 aaKnown RBP5.38□□□□□ -1.55
SCAF11-214ENST00000550893 TEKT3Q9BXF9 490 aa5.38□□□□□ -1.55
SCAF11-214ENST00000550893 C22orf23Q9BZE7 217 aa5.38□□□□□ -1.55
SCAF11-214ENST00000550893 PCDH12Q9NPG4 1184 aa5.38□□□□□ -1.55
SCAF11-214ENST00000550893 RGS18Q9NS28 235 aa5.38□□□□□ -1.55
SCAF11-214ENST00000550893 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.38□□□□□ -1.55
SCAF11-214ENST00000550893 ZNHIT2Q9UHR6 403 aa5.38□□□□□ -1.55
SCAF11-214ENST00000550893 ST3GAL5Q9UNP4 418 aa5.38□□□□□ -1.55
SCAF11-214ENST00000550893 PCDHB1Q9Y5F3 818 aa5.38□□□□□ -1.55
SCAF11-214ENST00000550893 COL4A3BPQ9Y5P4 624 aa5.38□□□□□ -1.55
SCAF11-214ENST00000550893 DNAH14Q0VDD8 3507 aa5.37□□□□□ -1.55
SCAF11-214ENST00000550893 A0A087WZ62 844 aa5.37□□□□□ -1.55
SCAF11-214ENST00000550893 INPPL1O15357 1258 aa5.37□□□□□ -1.55
SCAF11-214ENST00000550893 CCNT1O60563 726 aaKnown RBP5.37□□□□□ -1.55
SCAF11-214ENST00000550893 ERN1O75460 977 aaKnown RBP5.37□□□□□ -1.55
SCAF11-214ENST00000550893 HAUS5O94927 633 aa5.37□□□□□ -1.55
SCAF11-214ENST00000550893 ESRRBO95718 433 aa5.37□□□□□ -1.55
SCAF11-214ENST00000550893 MTHFD1P11586 935 aaKnown RBP5.37□□□□□ -1.55
SCAF11-214ENST00000550893 GCFC2P16383 781 aaKnown RBP5.37□□□□□ -1.55
SCAF11-214ENST00000550893 TYRP1P17643 537 aa5.37□□□□□ -1.55
SCAF11-214ENST00000550893 FDXRP22570 491 aa5.37□□□□□ -1.55
SCAF11-214ENST00000550893 SFNP31947 248 aa5.37□□□□□ -1.55
SCAF11-214ENST00000550893 PLA2G5P39877 138 aa5.37□□□□□ -1.55
SCAF11-214ENST00000550893 RARRES1P49788 294 aa5.37□□□□□ -1.55
SCAF11-214ENST00000550893 CRYBB1P53674 252 aaPredicted RBP5.37□□□□□ -1.55
SCAF11-214ENST00000550893 CYP4A11Q02928 519 aa5.37□□□□□ -1.55
SCAF11-214ENST00000550893 CUL4AQ13619 759 aa5.37□□□□□ -1.55
SCAF11-214ENST00000550893 CAPSQ13938 189 aa5.37□□□□□ -1.55
SCAF11-214ENST00000550893 CTTNQ14247 550 aaKnown RBP5.37□□□□□ -1.55
SCAF11-214ENST00000550893 NAB2Q15742 525 aa5.37□□□□□ -1.55
SCAF11-214ENST00000550893 XKR3Q5GH77 459 aa5.37□□□□□ -1.55
SCAF11-214ENST00000550893 TCEAL5Q5H9L2 206 aa5.37□□□□□ -1.55
SCAF11-214ENST00000550893 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.37□□□□□ -1.55
SCAF11-214ENST00000550893 TRMT1LQ7Z2T5 733 aaKnown RBP5.37□□□□□ -1.55
SCAF11-214ENST00000550893 MIER3Q7Z3K6 550 aa5.37□□□□□ -1.55
SCAF11-214ENST00000550893 ECHDC2Q86YB7 292 aa5.37□□□□□ -1.55
SCAF11-214ENST00000550893 C4orf19Q8IY42 314 aa5.37□□□□□ -1.55
SCAF11-214ENST00000550893 RNF168Q8IYW5 571 aaPredicted RBP5.37□□□□□ -1.55
SCAF11-214ENST00000550893 SPPL3Q8TCT6 385 aa5.37□□□□□ -1.55
SCAF11-214ENST00000550893 CLPTM1LQ96KA5 538 aa5.37□□□□□ -1.55
SCAF11-214ENST00000550893 MSLNLQ96KJ4 702 aa5.37□□□□□ -1.55
SCAF11-214ENST00000550893 FAM20AQ96MK3 541 aa5.37□□□□□ -1.55
SCAF11-214ENST00000550893 ASB2Q96Q27 587 aa5.37□□□□□ -1.55
SCAF11-214ENST00000550893 DMRTA2Q96SC8 542 aa5.37□□□□□ -1.55
SCAF11-214ENST00000550893 EIF2AK1Q9BQI3 630 aaKnown RBP5.37□□□□□ -1.55
SCAF11-214ENST00000550893 ASPSCR1Q9BZE9 553 aa5.37□□□□□ -1.55
SCAF11-214ENST00000550893 SLC13A1Q9BZW2 595 aa5.37□□□□□ -1.55
SCAF11-214ENST00000550893 MTIF3Q9H2K0 278 aaKnown RBP5.37□□□□□ -1.55
SCAF11-214ENST00000550893 AZI2Q9H6S1 392 aa5.37□□□□□ -1.55
SCAF11-214ENST00000550893 UNKLQ9H9P5 680 aaKnown RBP5.37□□□□□ -1.55
SCAF11-214ENST00000550893 ALG13Q9NP73 1137 aaKnown RBP5.37□□□□□ -1.55
SCAF11-214ENST00000550893 MARCH5Q9NX47 278 aa5.37□□□□□ -1.55
SCAF11-214ENST00000550893 THEGQ9P2T0 379 aa5.37□□□□□ -1.55
SCAF11-214ENST00000550893 INSL6Q9Y581 213 aa5.37□□□□□ -1.55
SCAF11-214ENST00000550893 CACNA1HO95180 2353 aa5.37□□□□□ -1.55
SCAF11-214ENST00000550893 GREB1Q4ZG55 1949 aa5.36□□□□□ -1.55
SCAF11-214ENST00000550893 ZNF292O60281 2723 aa5.36□□□□□ -1.55
SCAF11-214ENST00000550893 ZAR1LA6NP61 321 aa5.36□□□□□ -1.55
SCAF11-214ENST00000550893 CPLX1O14810 134 aa5.36□□□□□ -1.55
SCAF11-214ENST00000550893 B4GALT5O43286 388 aa5.36□□□□□ -1.55
SCAF11-214ENST00000550893 TSPAN1O60635 241 aa5.36□□□□□ -1.55
SCAF11-214ENST00000550893 PPFIA2O75334 1257 aa5.36□□□□□ -1.55
SCAF11-214ENST00000550893 AGFG2O95081 481 aa5.36□□□□□ -1.55
SCAF11-214ENST00000550893 IL9P15248 144 aa5.36□□□□□ -1.55
SCAF11-214ENST00000550893 GLRA2P23416 452 aa5.36□□□□□ -1.55
SCAF11-214ENST00000550893 ARL2P36404 184 aa5.36□□□□□ -1.55
SCAF11-214ENST00000550893 QARSP47897 775 aaKnown RBP5.36□□□□□ -1.55
SCAF11-214ENST00000550893 CLK3P49761 638 aaKnown RBP5.36□□□□□ -1.55
SCAF11-214ENST00000550893 VAV2P52735 878 aa5.36□□□□□ -1.55
SCAF11-214ENST00000550893 PSMC5P62195 406 aa5.36□□□□□ -1.55
SCAF11-214ENST00000550893 TLE1Q04724 770 aa5.36□□□□□ -1.55
SCAF11-214ENST00000550893 MBTD1Q05BQ5 628 aa5.36□□□□□ -1.55
SCAF11-214ENST00000550893 MPP3Q13368 585 aa5.36□□□□□ -1.55
SCAF11-214ENST00000550893 RAB39AQ14964 217 aa5.36□□□□□ -1.55
SCAF11-214ENST00000550893 EMC2Q15006 297 aa5.36□□□□□ -1.55
SCAF11-214ENST00000550893 ANKRD1Q15327 319 aa5.36□□□□□ -1.55
SCAF11-214ENST00000550893 UAP1L1Q3KQV9 507 aa5.36□□□□□ -1.55
SCAF11-214ENST00000550893 FLYWCH1Q4VC44 716 aa5.36□□□□□ -1.55
SCAF11-214ENST00000550893 FAM160B1Q5W0V3 765 aa5.36□□□□□ -1.55
SCAF11-214ENST00000550893 CATSPER3Q86XQ3 398 aa5.36□□□□□ -1.55
SCAF11-214ENST00000550893 NME8Q8N427 588 aa5.36□□□□□ -1.55
SCAF11-214ENST00000550893 Q8NA96 180 aa5.36□□□□□ -1.55
SCAF11-214ENST00000550893 IL17RDQ8NFM7 739 aa5.36□□□□□ -1.55
SCAF11-214ENST00000550893 PIGOQ8TEQ8 1089 aa5.36□□□□□ -1.55
SCAF11-214ENST00000550893 PPM1EQ8WY54 764 aa5.36□□□□□ -1.55
SCAF11-214ENST00000550893 TMEM143Q96AN5 459 aa5.36□□□□□ -1.55
SCAF11-214ENST00000550893 MRPL38Q96DV4 380 aaKnown RBP5.36□□□□□ -1.55
SCAF11-214ENST00000550893 FAM167AQ96KS9 214 aa5.36□□□□□ -1.55
SCAF11-214ENST00000550893 MED15Q96RN5 788 aa5.36□□□□□ -1.55
SCAF11-214ENST00000550893 SMAD5Q99717 465 aaKnown RBP5.36□□□□□ -1.55
SCAF11-214ENST00000550893 LLPHQ9BRT6 129 aaKnown RBP5.36□□□□□ -1.55
SCAF11-214ENST00000550893 TLR10Q9BXR5 811 aa5.36□□□□□ -1.55
SCAF11-214ENST00000550893 EIF2AQ9BY44 585 aaKnown RBP5.36□□□□□ -1.55
SCAF11-214ENST00000550893 UBE2ZQ9H832 354 aaPredicted RBP5.36□□□□□ -1.55
SCAF11-214ENST00000550893 CASS4Q9NQ75 786 aa5.36□□□□□ -1.55
SCAF11-214ENST00000550893 AGPAT5Q9NUQ2 364 aa5.36□□□□□ -1.55
SCAF11-214ENST00000550893 TBCCD1Q9NVR7 557 aa5.36□□□□□ -1.55
SCAF11-214ENST00000550893 VSX1Q9NZR4 365 aaPredicted RBP5.36□□□□□ -1.55
SCAF11-214ENST00000550893 CACNG4Q9UBN1 327 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms