RNA–Protein interactions for RNA: ENST00000550557.1

NR4A1-215, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 4,837 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-215ENST00000550557 LONP2Q86WA8 852 aa12.41□□□□□ -0.42
NR4A1-215ENST00000550557 LRRC49Q8IUZ0 686 aa12.41□□□□□ -0.42
NR4A1-215ENST00000550557 CFAP52Q8N1V2 620 aa12.41□□□□□ -0.42
NR4A1-215ENST00000550557 RIBC1Q8N443 379 aaPredicted RBP12.41□□□□□ -0.42
NR4A1-215ENST00000550557 HES6Q96HZ4 224 aa12.41□□□□□ -0.42
NR4A1-215ENST00000550557 RUBCNLQ9H714 662 aa12.41□□□□□ -0.42
NR4A1-215ENST00000550557 PRDM16Q9HAZ2 1276 aa12.41□□□□□ -0.42
NR4A1-215ENST00000550557 TAS2R14Q9NYV8 317 aa12.41□□□□□ -0.42
NR4A1-215ENST00000550557 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.41□□□□□ -0.42
NR4A1-215ENST00000550557 ZNHIT2Q9UHR6 403 aa12.41□□□□□ -0.42
NR4A1-215ENST00000550557 PCDHA3Q9Y5H8 950 aa12.41□□□□□ -0.42
NR4A1-215ENST00000550557 MAGEB16A2A368 324 aa12.4□□□□□ -0.42
NR4A1-215ENST00000550557 DAB1O75553 588 aa12.4□□□□□ -0.42
NR4A1-215ENST00000550557 SEC13P55735 322 aa12.4□□□□□ -0.42
NR4A1-215ENST00000550557 IRF5Q13568 498 aa12.4□□□□□ -0.42
NR4A1-215ENST00000550557 MAPRE2Q15555 327 aa12.4□□□□□ -0.42
NR4A1-215ENST00000550557 GRAMD1BQ3KR37 738 aa12.4□□□□□ -0.42
NR4A1-215ENST00000550557 SPDYCQ5MJ68 293 aa12.4□□□□□ -0.42
NR4A1-215ENST00000550557 FAM71AQ8IYT1 594 aa12.4□□□□□ -0.42
NR4A1-215ENST00000550557 JADE3Q92613 823 aa12.4□□□□□ -0.42
NR4A1-215ENST00000550557 PPP1R36Q96LQ0 422 aa12.4□□□□□ -0.42
NR4A1-215ENST00000550557 SH3GL2Q99962 352 aa12.4□□□□□ -0.42
NR4A1-215ENST00000550557 SAGE1Q9NXZ1 904 aa12.4□□□□□ -0.42
NR4A1-215ENST00000550557 LRRC72A6NJI9 287 aa12.4□□□□□ -0.42
NR4A1-215ENST00000550557 EIF4E1BA6NMX2 242 aaKnown RBP12.4□□□□□ -0.42
NR4A1-215ENST00000550557 SOAT1P35610 550 aa12.4□□□□□ -0.42
NR4A1-215ENST00000550557 TEAD4Q15561 434 aa12.4□□□□□ -0.42
NR4A1-215ENST00000550557 CCNG2Q16589 344 aa12.4□□□□□ -0.42
NR4A1-215ENST00000550557 C12orf50Q8NA57 414 aaPredicted RBP12.4□□□□□ -0.42
NR4A1-215ENST00000550557 RFWD2Q8NHY2 731 aa12.4□□□□□ -0.42
NR4A1-215ENST00000550557 MCOLN3Q8TDD5 553 aa12.4□□□□□ -0.42
NR4A1-215ENST00000550557 EXOC2Q96KP1 924 aa12.4□□□□□ -0.42
NR4A1-215ENST00000550557 MCOLN1Q9GZU1 580 aa12.4□□□□□ -0.42
NR4A1-215ENST00000550557 GGA2Q9UJY4 613 aa12.4□□□□□ -0.42
NR4A1-215ENST00000550557 A0A1W2PRU2 124 aa12.4□□□□□ -0.42
NR4A1-215ENST00000550557 MSI1O43347 362 aaKnown RBP12.4□□□□□ -0.42
NR4A1-215ENST00000550557 SUPT7LO94864 414 aa12.4□□□□□ -0.42
NR4A1-215ENST00000550557 ATP6V1G2O95670 118 aa12.4□□□□□ -0.42
NR4A1-215ENST00000550557 C1RP00736 705 aa12.4□□□□□ -0.42
NR4A1-215ENST00000550557 DYNC1I2Q13409 638 aaKnown RBP12.4□□□□□ -0.42
NR4A1-215ENST00000550557 TTC39BQ5VTQ0 682 aaPredicted RBP12.4□□□□□ -0.42
NR4A1-215ENST00000550557 ANKS6Q68DC2 871 aa12.4□□□□□ -0.42
NR4A1-215ENST00000550557 MFSD7Q6UXD7 560 aa12.4□□□□□ -0.42
NR4A1-215ENST00000550557 TRIML2Q8N7C3 387 aa12.4□□□□□ -0.42
NR4A1-215ENST00000550557 OR14C36Q8NHC7 312 aa12.4□□□□□ -0.42
NR4A1-215ENST00000550557 SHC3Q92529 594 aa12.4□□□□□ -0.42
NR4A1-215ENST00000550557 B3GALT6Q96L58 329 aa12.4□□□□□ -0.42
NR4A1-215ENST00000550557 GPAMQ9HCL2 828 aa12.4□□□□□ -0.42
NR4A1-215ENST00000550557 GULP1Q9UBP9 304 aa12.4□□□□□ -0.42
NR4A1-215ENST00000550557 NAALADL1Q9UQQ1 740 aa12.4□□□□□ -0.42
NR4A1-215ENST00000550557 DNAJC16Q9Y2G8 782 aa12.4□□□□□ -0.42
NR4A1-215ENST00000550557 NR2E1Q9Y466 385 aa12.4□□□□□ -0.42
NR4A1-215ENST00000550557 MYH13Q9UKX3 1938 aa12.4□□□□□ -0.42
NR4A1-215ENST00000550557 CLUHO75153 1309 aa12.4□□□□□ -0.43
NR4A1-215ENST00000550557 ANGPT2O15123 496 aa12.4□□□□□ -0.43
NR4A1-215ENST00000550557 GPC1P35052 558 aa12.4□□□□□ -0.43
NR4A1-215ENST00000550557 MTHFRP42898 656 aa12.4□□□□□ -0.43
NR4A1-215ENST00000550557 INPP1P49441 399 aa12.4□□□□□ -0.43
NR4A1-215ENST00000550557 SLC10A6Q3KNW5 377 aa12.4□□□□□ -0.43
NR4A1-215ENST00000550557 C4orf33Q8N1A6 199 aa12.4□□□□□ -0.43
NR4A1-215ENST00000550557 LRRC15Q8TF66 581 aa12.4□□□□□ -0.43
NR4A1-215ENST00000550557 TIFAQ96CG3 184 aa12.4□□□□□ -0.43
NR4A1-215ENST00000550557 KLF6Q99612 283 aaPredicted RBP12.4□□□□□ -0.43
NR4A1-215ENST00000550557 STARD13Q9Y3M8 1113 aa12.4□□□□□ -0.43
NR4A1-215ENST00000550557 SYCE1LA8MT33 242 aa12.39□□□□□ -0.43
NR4A1-215ENST00000550557 RASSF9O75901 435 aa12.39□□□□□ -0.43
NR4A1-215ENST00000550557 RARAP10276 462 aa12.39□□□□□ -0.43
NR4A1-215ENST00000550557 PYGMP11217 842 aa12.39□□□□□ -0.43
NR4A1-215ENST00000550557 KCNA5P22460 613 aa12.39□□□□□ -0.43
NR4A1-215ENST00000550557 STX3Q13277 289 aa12.39□□□□□ -0.43
NR4A1-215ENST00000550557 TMCO4Q5TGY1 634 aa12.39□□□□□ -0.43
NR4A1-215ENST00000550557 TSTD1Q8NFU3 115 aa12.39□□□□□ -0.43
NR4A1-215ENST00000550557 GLMNQ92990 594 aa12.39□□□□□ -0.43
NR4A1-215ENST00000550557 SEMA3CQ99985 751 aa12.39□□□□□ -0.43
NR4A1-215ENST00000550557 CDC42EP4Q9H3Q1 356 aaKnown RBP12.39□□□□□ -0.43
NR4A1-215ENST00000550557 DNPEPQ9ULA0 475 aa12.39□□□□□ -0.43
NR4A1-215ENST00000550557 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.39□□□□□ -0.43
NR4A1-215ENST00000550557 CCDC22O60826 627 aa12.39□□□□□ -0.43
NR4A1-215ENST00000550557 SERPINB4P48594 390 aa12.39□□□□□ -0.43
NR4A1-215ENST00000550557 DGKGP49619 791 aa12.39□□□□□ -0.43
NR4A1-215ENST00000550557 DGKEP52429 567 aa12.39□□□□□ -0.43
NR4A1-215ENST00000550557 CYP4F8P98187 520 aa12.39□□□□□ -0.43
NR4A1-215ENST00000550557 MLLT1Q03111 559 aaPredicted RBP12.39□□□□□ -0.43
NR4A1-215ENST00000550557 MPP3Q13368 585 aa12.39□□□□□ -0.43
NR4A1-215ENST00000550557 ARMC2Q8NEN0 867 aa12.39□□□□□ -0.43
NR4A1-215ENST00000550557 MED8Q96G25 268 aa12.39□□□□□ -0.43
NR4A1-215ENST00000550557 FUBP3Q96I24 572 aaKnown RBP eCLIP12.39□□□□□ -0.43
NR4A1-215ENST00000550557 SEMA4AQ9H3S1 761 aa12.39□□□□□ -0.43
NR4A1-215ENST00000550557 AGO1Q9UL18 857 aaKnown RBP12.39□□□□□ -0.43
NR4A1-215ENST00000550557 TUBGCP6Q96RT7 1819 aa12.39□□□□□ -0.43
NR4A1-215ENST00000550557 SLC38A8A6NNN8 435 aa12.39□□□□□ -0.43
NR4A1-215ENST00000550557 ZNF839A8K0R7 811 aa12.39□□□□□ -0.43
NR4A1-215ENST00000550557 TRIM49D1C9J1S8 452 aa12.39□□□□□ -0.43
NR4A1-215ENST00000550557 ELFN1P0C7U0 828 aa12.39□□□□□ -0.43
NR4A1-215ENST00000550557 PSMD8P48556 350 aa12.39□□□□□ -0.43
NR4A1-215ENST00000550557 DNAJB7Q7Z6W7 309 aaPredicted RBP12.39□□□□□ -0.43
NR4A1-215ENST00000550557 MAGEC3Q8TD91 643 aa12.39□□□□□ -0.43
NR4A1-215ENST00000550557 PCED1BQ96HM7 432 aa12.39□□□□□ -0.43
NR4A1-215ENST00000550557 FEM1CQ96JP0 617 aa12.39□□□□□ -0.43
NR4A1-215ENST00000550557 MAGEB18Q96M61 343 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms