RNA–Protein interactions for RNA: ENST00000550168.5

CACNB3-214, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 677 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-214ENST00000550168 C9orf50Q5SZB4 431 aa12.86□□□□□ -0.35
CACNB3-214ENST00000550168 ANKRD22Q5VYY1 191 aa12.86□□□□□ -0.35
CACNB3-214ENST00000550168 LRRC8BQ6P9F7 803 aa12.86□□□□□ -0.35
CACNB3-214ENST00000550168 C14orf80Q86SX3 495 aa12.86□□□□□ -0.35
CACNB3-214ENST00000550168 SETD3Q86TU7 594 aaPredicted RBP12.86□□□□□ -0.35
CACNB3-214ENST00000550168 TDRPQ86YL5 185 aa12.86□□□□□ -0.35
CACNB3-214ENST00000550168 TMC8Q8IU68 726 aa12.86□□□□□ -0.35
CACNB3-214ENST00000550168 KLHDC8BQ8IXV7 354 aa12.86□□□□□ -0.35
CACNB3-214ENST00000550168 BBS5Q8N3I7 341 aa12.86□□□□□ -0.35
CACNB3-214ENST00000550168 KIAA1958Q8N8K9 716 aa12.86□□□□□ -0.35
CACNB3-214ENST00000550168 ZNF557Q8N988 423 aaPredicted RBP12.86□□□□□ -0.35
CACNB3-214ENST00000550168 FAM76AQ8TAV0 307 aa12.86□□□□□ -0.35
CACNB3-214ENST00000550168 IL12RB2Q99665 862 aa12.86□□□□□ -0.35
CACNB3-214ENST00000550168 SLC39A8Q9C0K1 460 aa12.86□□□□□ -0.35
CACNB3-214ENST00000550168 LRRC40Q9H9A6 602 aa12.86□□□□□ -0.35
CACNB3-214ENST00000550168 ALG13Q9NP73 1137 aaKnown RBP12.86□□□□□ -0.35
CACNB3-214ENST00000550168 SEPT10Q9P0V9 454 aa12.86□□□□□ -0.35
CACNB3-214ENST00000550168 RSPH14Q9UHP6 348 aa12.86□□□□□ -0.35
CACNB3-214ENST00000550168 IPO11Q9UI26 975 aaKnown RBP12.86□□□□□ -0.35
CACNB3-214ENST00000550168 NCOR2Q9Y618 2525 aa12.85□□□□□ -0.35
CACNB3-214ENST00000550168 CXorf51AA0A1B0GTR3 108 aa12.85□□□□□ -0.35
CACNB3-214ENST00000550168 A0A1B0GVM2 712 aa12.85□□□□□ -0.35
CACNB3-214ENST00000550168 TCAF2A6NFQ2 919 aa12.85□□□□□ -0.35
CACNB3-214ENST00000550168 SPDYE4A6NLX3 237 aa12.85□□□□□ -0.35
CACNB3-214ENST00000550168 RASA4BC9J798 803 aa12.85□□□□□ -0.35
CACNB3-214ENST00000550168 ZNF197O14709 1029 aa12.85□□□□□ -0.35
CACNB3-214ENST00000550168 RGS16O15492 202 aaPredicted RBP12.85□□□□□ -0.35
CACNB3-214ENST00000550168 RASA4O43374 803 aa12.85□□□□□ -0.35
CACNB3-214ENST00000550168 MAFKO60675 156 aa12.85□□□□□ -0.35
CACNB3-214ENST00000550168 CDH16O75309 829 aa12.85□□□□□ -0.35
CACNB3-214ENST00000550168 ACSL3O95573 720 aa12.85□□□□□ -0.35
CACNB3-214ENST00000550168 AP2A1O95782 977 aa12.85□□□□□ -0.35
CACNB3-214ENST00000550168 PTPN2P17706 415 aa12.85□□□□□ -0.35
CACNB3-214ENST00000550168 HDCP19113 662 aa12.85□□□□□ -0.35
CACNB3-214ENST00000550168 OR1E1P30953 314 aa12.85□□□□□ -0.35
CACNB3-214ENST00000550168 STX2P32856 288 aa12.85□□□□□ -0.35
CACNB3-214ENST00000550168 MAGEA3P43357 314 aa12.85□□□□□ -0.35
CACNB3-214ENST00000550168 MMP13P45452 471 aa12.85□□□□□ -0.35
CACNB3-214ENST00000550168 GEMP55040 296 aa12.85□□□□□ -0.35
CACNB3-214ENST00000550168 TFF2Q03403 129 aa12.85□□□□□ -0.35
CACNB3-214ENST00000550168 RFTN1Q14699 578 aaPredicted RBP12.85□□□□□ -0.35
CACNB3-214ENST00000550168 BBS9Q3SYG4 887 aa12.85□□□□□ -0.35
CACNB3-214ENST00000550168 FAM133BQ5BKY9 247 aaKnown RBP12.85□□□□□ -0.35
CACNB3-214ENST00000550168 ARTNQ5T4W7 220 aa12.85□□□□□ -0.35
CACNB3-214ENST00000550168 NAPEPLDQ6IQ20 393 aa12.85□□□□□ -0.35
CACNB3-214ENST00000550168 ZNF449Q6P9G9 518 aa12.85□□□□□ -0.35
CACNB3-214ENST00000550168 TAOK1Q7L7X3 1001 aa12.85□□□□□ -0.35
CACNB3-214ENST00000550168 TMEM150AQ86TG1 271 aa12.85□□□□□ -0.35
CACNB3-214ENST00000550168 FAM217AQ8IXS0 508 aa12.85□□□□□ -0.35
CACNB3-214ENST00000550168 PALM2Q8IXS6 379 aa12.85□□□□□ -0.35
CACNB3-214ENST00000550168 LGI2Q8N0V4 545 aa12.85□□□□□ -0.35
CACNB3-214ENST00000550168 CPXM2Q8N436 756 aa12.85□□□□□ -0.35
CACNB3-214ENST00000550168 PPP2R3CQ969Q6 453 aa12.85□□□□□ -0.35
CACNB3-214ENST00000550168 CELF6Q96J87 481 aaKnown RBP12.85□□□□□ -0.35
CACNB3-214ENST00000550168 C9orf72Q96LT7 481 aa12.85□□□□□ -0.35
CACNB3-214ENST00000550168 FCRL5Q96RD9 977 aa12.85□□□□□ -0.35
CACNB3-214ENST00000550168 CDCA3Q99618 268 aaPredicted RBP12.85□□□□□ -0.35
CACNB3-214ENST00000550168 C17orf80Q9BSJ5 609 aa12.85□□□□□ -0.35
CACNB3-214ENST00000550168 LRRC3Q9BY71 257 aa12.85□□□□□ -0.35
CACNB3-214ENST00000550168 SP110Q9HB58 689 aa12.85□□□□□ -0.35
CACNB3-214ENST00000550168 MPP6Q9NZW5 540 aa12.85□□□□□ -0.35
CACNB3-214ENST00000550168 SLC24A2Q9UI40 661 aa12.85□□□□□ -0.35
CACNB3-214ENST00000550168 ZNF638Q14966 1978 aaKnown RBP12.85□□□□□ -0.35
CACNB3-214ENST00000550168 ILVBLA1L0T0 632 aa12.84□□□□□ -0.35
CACNB3-214ENST00000550168 KCNK1O00180 336 aa12.84□□□□□ -0.35
CACNB3-214ENST00000550168 TRDMT1O14717 391 aaKnown RBP12.84□□□□□ -0.35
CACNB3-214ENST00000550168 PAPLNO95428 1278 aa12.84□□□□□ -0.35
CACNB3-214ENST00000550168 PAPOLAP51003 745 aaKnown RBP12.84□□□□□ -0.35
CACNB3-214ENST00000550168 GABPB1Q06547 395 aaPredicted RBP12.84□□□□□ -0.35
CACNB3-214ENST00000550168 GPM6BQ13491 265 aa12.84□□□□□ -0.35
CACNB3-214ENST00000550168 POLD3Q15054 466 aaPredicted RBP12.84□□□□□ -0.35
CACNB3-214ENST00000550168 SLC14A2Q15849 920 aa12.84□□□□□ -0.35
CACNB3-214ENST00000550168 MPP7Q5T2T1 576 aa12.84□□□□□ -0.35
CACNB3-214ENST00000550168 EMC10Q5UCC4 262 aa12.84□□□□□ -0.35
CACNB3-214ENST00000550168 NADSYN1Q6IA69 706 aa12.84□□□□□ -0.35
CACNB3-214ENST00000550168 CYS1Q717R9 158 aa12.84□□□□□ -0.35
CACNB3-214ENST00000550168 DENND1CQ8IV53 801 aa12.84□□□□□ -0.35
CACNB3-214ENST00000550168 CCDC117Q8IWD4 279 aaPredicted RBP12.84□□□□□ -0.35
CACNB3-214ENST00000550168 HJURPQ8NCD3 748 aaPredicted RBP12.84□□□□□ -0.35
CACNB3-214ENST00000550168 FBXO36Q8NEA4 188 aa12.84□□□□□ -0.35
CACNB3-214ENST00000550168 IGSF8Q969P0 613 aa12.84□□□□□ -0.35
CACNB3-214ENST00000550168 CNTNAP3BQ96NU0 1288 aa12.84□□□□□ -0.35
CACNB3-214ENST00000550168 CNTNAP3Q9BZ76 1288 aa12.84□□□□□ -0.35
CACNB3-214ENST00000550168 ATXN3LQ9H3M9 355 aa12.84□□□□□ -0.35
CACNB3-214ENST00000550168 ZNF576Q9H609 170 aa12.84□□□□□ -0.35
CACNB3-214ENST00000550168 VPS37BQ9H9H4 285 aa12.84□□□□□ -0.35
CACNB3-214ENST00000550168 TRPC7Q9HCX4 862 aa12.84□□□□□ -0.35
CACNB3-214ENST00000550168 ZNF334Q9HCZ1 680 aaPredicted RBP12.84□□□□□ -0.35
CACNB3-214ENST00000550168 MAN1C1Q9NR34 630 aa12.84□□□□□ -0.35
CACNB3-214ENST00000550168 VPS45Q9NRW7 570 aa12.84□□□□□ -0.35
CACNB3-214ENST00000550168 VPS18Q9P253 973 aa12.84□□□□□ -0.35
CACNB3-214ENST00000550168 ZNF212Q9UDV6 495 aa12.84□□□□□ -0.35
CACNB3-214ENST00000550168 MSRAQ9UJ68 235 aa12.84□□□□□ -0.35
CACNB3-214ENST00000550168 AGO1Q9UL18 857 aaKnown RBP12.84□□□□□ -0.35
CACNB3-214ENST00000550168 ARHGAP26Q9UNA1 814 aa12.84□□□□□ -0.35
CACNB3-214ENST00000550168 TEX264Q9Y6I9 313 aa12.84□□□□□ -0.35
CACNB3-214ENST00000550168 FLNBO75369 2602 aaKnown RBP12.84□□□□□ -0.35
CACNB3-214ENST00000550168 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.83□□□□□ -0.36
CACNB3-214ENST00000550168 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.83□□□□□ -0.36
CACNB3-214ENST00000550168 EXOC1LA0A1B0GW35 172 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms