RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 LSMEM2Q8N112 164 aa10.14□□□□□ -0.79
TRAFD1-207ENST00000550051 CCAR2Q8N163 923 aaKnown RBP10.14□□□□□ -0.79
TRAFD1-207ENST00000550051 PPM1KQ8N3J5 372 aa10.14□□□□□ -0.79
TRAFD1-207ENST00000550051 ATP6V0D2Q8N8Y2 350 aa10.14□□□□□ -0.79
TRAFD1-207ENST00000550051 ZNF248Q8NDW4 579 aa10.14□□□□□ -0.79
TRAFD1-207ENST00000550051 OR4C6Q8NH72 309 aa10.14□□□□□ -0.79
TRAFD1-207ENST00000550051 OR8D1Q8WZ84 308 aa10.14□□□□□ -0.79
TRAFD1-207ENST00000550051 KAT5Q92993 513 aa10.14□□□□□ -0.79
TRAFD1-207ENST00000550051 FAM149B1Q96BN6 582 aa10.14□□□□□ -0.79
TRAFD1-207ENST00000550051 IFT43Q96FT9 208 aa10.14□□□□□ -0.79
TRAFD1-207ENST00000550051 HIC2Q96JB3 615 aa10.14□□□□□ -0.79
TRAFD1-207ENST00000550051 CEP63Q96MT8 703 aa10.14□□□□□ -0.79
TRAFD1-207ENST00000550051 ZNF578Q96N58 590 aaPredicted RBP10.14□□□□□ -0.79
TRAFD1-207ENST00000550051 MED15Q96RN5 788 aa10.14□□□□□ -0.79
TRAFD1-207ENST00000550051 FEM1AQ9BSK4 669 aa10.14□□□□□ -0.79
TRAFD1-207ENST00000550051 POPDC2Q9HBU9 364 aa10.14□□□□□ -0.79
TRAFD1-207ENST00000550051 PREBQ9HCU5 417 aa10.14□□□□□ -0.79
TRAFD1-207ENST00000550051 OR51B4Q9Y5P0 310 aa10.14□□□□□ -0.79
TRAFD1-207ENST00000550051 ASH1LQ9NR48 2969 aaKnown RBP10.14□□□□□ -0.79
TRAFD1-207ENST00000550051 FLNBO75369 2602 aaKnown RBP10.13□□□□□ -0.79
TRAFD1-207ENST00000550051 A0A1B0GVM2 712 aa10.13□□□□□ -0.79
TRAFD1-207ENST00000550051 TCAF2A6NFQ2 919 aa10.13□□□□□ -0.79
TRAFD1-207ENST00000550051 F5H5T6 163 aa10.13□□□□□ -0.79
TRAFD1-207ENST00000550051 ERVH48-1M5A8F1 160 aa10.13□□□□□ -0.79
TRAFD1-207ENST00000550051 MOCS2O96007 188 aaPredicted RBP10.13□□□□□ -0.79
TRAFD1-207ENST00000550051 CALCAP01258 141 aa10.13□□□□□ -0.79
TRAFD1-207ENST00000550051 CKMT1AP12532 417 aa10.13□□□□□ -0.79
TRAFD1-207ENST00000550051 PDGFRAP16234 1089 aa10.13□□□□□ -0.79
TRAFD1-207ENST00000550051 MAT2AP31153 395 aaKnown RBP10.13□□□□□ -0.79
TRAFD1-207ENST00000550051 LSSP48449 732 aa10.13□□□□□ -0.79
TRAFD1-207ENST00000550051 TAS2R38P59533 333 aa10.13□□□□□ -0.79
TRAFD1-207ENST00000550051 ERVPABLB-1P60509 514 aa10.13□□□□□ -0.79
TRAFD1-207ENST00000550051 CFHR1Q03591 330 aa10.13□□□□□ -0.79
TRAFD1-207ENST00000550051 CCDC15Q0P6D6 951 aa10.13□□□□□ -0.79
TRAFD1-207ENST00000550051 CCDC173Q0VFZ6 552 aa10.13□□□□□ -0.79
TRAFD1-207ENST00000550051 KCNMA1Q12791 1236 aa10.13□□□□□ -0.79
TRAFD1-207ENST00000550051 KCNH2Q12809 1159 aa10.13□□□□□ -0.79
TRAFD1-207ENST00000550051 CNTN1Q12860 1018 aa10.13□□□□□ -0.79
TRAFD1-207ENST00000550051 PNOCQ13519 176 aa10.13□□□□□ -0.79
TRAFD1-207ENST00000550051 DLG2Q15700 870 aa10.13□□□□□ -0.79
TRAFD1-207ENST00000550051 CXorf57Q6NSI4 855 aaKnown RBP10.13□□□□□ -0.79
TRAFD1-207ENST00000550051 CHSY1Q86X52 802 aa10.13□□□□□ -0.79
TRAFD1-207ENST00000550051 FMR1NBQ8N0W7 255 aaPredicted RBP10.13□□□□□ -0.79
TRAFD1-207ENST00000550051 TMEM145Q8NBT3 493 aa10.13□□□□□ -0.79
TRAFD1-207ENST00000550051 EHBP1Q8NDI1 1231 aa10.13□□□□□ -0.79
TRAFD1-207ENST00000550051 FAM174AQ8TBP5 190 aa10.13□□□□□ -0.79
TRAFD1-207ENST00000550051 SNRNP27Q8WVK2 155 aaKnown RBP10.13□□□□□ -0.79
TRAFD1-207ENST00000550051 DHTKD1Q96HY7 919 aaPredicted RBP10.13□□□□□ -0.79
TRAFD1-207ENST00000550051 ST7Q9NRC1 585 aa10.13□□□□□ -0.79
TRAFD1-207ENST00000550051 ATP6V1DQ9Y5K8 247 aa10.13□□□□□ -0.79
TRAFD1-207ENST00000550051 C1QTNF3-AMACRE9PGA6 284 aa10.12□□□□□ -0.79
TRAFD1-207ENST00000550051 GPR37O15354 613 aa10.12□□□□□ -0.79
TRAFD1-207ENST00000550051 MED7O43513 233 aa10.12□□□□□ -0.79
TRAFD1-207ENST00000550051 LZTS3O60299 673 aaPredicted RBP10.12□□□□□ -0.79
TRAFD1-207ENST00000550051 OPA1O60313 960 aa10.12□□□□□ -0.79
TRAFD1-207ENST00000550051 SDC3O75056 442 aa10.12□□□□□ -0.79
TRAFD1-207ENST00000550051 GP1BAP07359 652 aa10.12□□□□□ -0.79
TRAFD1-207ENST00000550051 GLI1P08151 1106 aa10.12□□□□□ -0.79
TRAFD1-207ENST00000550051 ZNF18P17022 549 aa10.12□□□□□ -0.79
TRAFD1-207ENST00000550051 CCR1P32246 355 aa10.12□□□□□ -0.79
TRAFD1-207ENST00000550051 UCNP55089 124 aa10.12□□□□□ -0.79
TRAFD1-207ENST00000550051 CXADRP78310 365 aa10.12□□□□□ -0.79
TRAFD1-207ENST00000550051 RHDQ02161 417 aa10.12□□□□□ -0.79
TRAFD1-207ENST00000550051 C5orf22Q49AR2 442 aa10.12□□□□□ -0.79
TRAFD1-207ENST00000550051 ACCSLQ4AC99 568 aa10.12□□□□□ -0.79
TRAFD1-207ENST00000550051 HS1BP3Q53T59 392 aa10.12□□□□□ -0.79
TRAFD1-207ENST00000550051 RABGAP1LQ5R372 815 aa10.12□□□□□ -0.79
TRAFD1-207ENST00000550051 PIP5KL1Q5T9C9 394 aa10.12□□□□□ -0.79
TRAFD1-207ENST00000550051 FBXL22Q6P050 247 aa10.12□□□□□ -0.79
TRAFD1-207ENST00000550051 DENND1BQ6P3S1 775 aa10.12□□□□□ -0.79
TRAFD1-207ENST00000550051 FOXR2Q6PJQ5 311 aa10.12□□□□□ -0.79
TRAFD1-207ENST00000550051 IGF2-ASQ6U949 168 aa10.12□□□□□ -0.79
TRAFD1-207ENST00000550051 KDM7AQ6ZMT4 941 aa10.12□□□□□ -0.79
TRAFD1-207ENST00000550051 RRAGAQ7L523 313 aa10.12□□□□□ -0.79
TRAFD1-207ENST00000550051 DCP2Q8IU60 420 aaKnown RBP10.12□□□□□ -0.79
TRAFD1-207ENST00000550051 SH2D3CQ8N5H7 860 aa10.12□□□□□ -0.79
TRAFD1-207ENST00000550051 FAM181AQ8N9Y4 354 aa10.12□□□□□ -0.79
TRAFD1-207ENST00000550051 ZNF606Q8WXB4 792 aa10.12□□□□□ -0.79
TRAFD1-207ENST00000550051 KREMEN1Q96MU8 473 aa10.12□□□□□ -0.79
TRAFD1-207ENST00000550051 DPH1Q9BZG8 443 aa10.12□□□□□ -0.79
TRAFD1-207ENST00000550051 USP29Q9HBJ7 922 aa10.12□□□□□ -0.79
TRAFD1-207ENST00000550051 SLC25A13Q9UJS0 675 aa10.12□□□□□ -0.79
TRAFD1-207ENST00000550051 HS3ST2Q9Y278 367 aa10.12□□□□□ -0.79
TRAFD1-207ENST00000550051 TBC1D30Q9Y2I9 924 aa10.12□□□□□ -0.79
TRAFD1-207ENST00000550051 MGAQ8IWI9 3026 aa10.12□□□□□ -0.79
TRAFD1-207ENST00000550051 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.11□□□□□ -0.79
TRAFD1-207ENST00000550051 TRIM49BA6NDI0 452 aa10.11□□□□□ -0.79
TRAFD1-207ENST00000550051 NEMP2A6NFY4 417 aa10.11□□□□□ -0.79
TRAFD1-207ENST00000550051 E5RJQ4 531 aa10.11□□□□□ -0.79
TRAFD1-207ENST00000550051 SCAMP1O15126 338 aa10.11□□□□□ -0.79
TRAFD1-207ENST00000550051 SLC31A1O15431 190 aa10.11□□□□□ -0.79
TRAFD1-207ENST00000550051 PIAS2O75928 621 aa10.11□□□□□ -0.79
TRAFD1-207ENST00000550051 SMC2O95347 1197 aa10.11□□□□□ -0.79
TRAFD1-207ENST00000550051 THEGLP0DJG4 465 aa10.11□□□□□ -0.79
TRAFD1-207ENST00000550051 PPP1R2P41236 205 aa10.11□□□□□ -0.79
TRAFD1-207ENST00000550051 PCBP4P57723 403 aaKnown RBP10.11□□□□□ -0.79
TRAFD1-207ENST00000550051 TMPRSS3P57727 454 aa10.11□□□□□ -0.79
TRAFD1-207ENST00000550051 PITX1P78337 314 aaPredicted RBP10.11□□□□□ -0.79
TRAFD1-207ENST00000550051 DAB2P98082 770 aa10.11□□□□□ -0.79
TRAFD1-207ENST00000550051 CDK17Q00537 523 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms