RNA–Protein interactions for RNA: ENST00000549759.1

PFDN5-207, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 559 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-207ENST00000549759 HS3ST2Q9Y278 367 aa13.11□□□□□ -0.31
PFDN5-207ENST00000549759 FARP1Q9Y4F1 1045 aaPredicted RBP13.11□□□□□ -0.31
PFDN5-207ENST00000549759 PCDHGA2Q9Y5H1 932 aa13.11□□□□□ -0.31
PFDN5-207ENST00000549759 COL4A3Q01955 1670 aa13.11□□□□□ -0.31
PFDN5-207ENST00000549759 EDDM13A0A1B0GTR0 161 aa13.1□□□□□ -0.31
PFDN5-207ENST00000549759 MACROD2A1Z1Q3 448 aa13.1□□□□□ -0.31
PFDN5-207ENST00000549759 LRRD1A4D1F6 860 aa13.1□□□□□ -0.31
PFDN5-207ENST00000549759 RASA4BC9J798 803 aa13.1□□□□□ -0.31
PFDN5-207ENST00000549759 AXIN1O15169 862 aa13.1□□□□□ -0.31
PFDN5-207ENST00000549759 RASA4O43374 803 aa13.1□□□□□ -0.31
PFDN5-207ENST00000549759 ZRANB2O95218 330 aaKnown RBP eCLIP13.1□□□□□ -0.31
PFDN5-207ENST00000549759 TNNT1P13805 278 aa13.1□□□□□ -0.31
PFDN5-207ENST00000549759 COL9A1P20849 921 aa13.1□□□□□ -0.31
PFDN5-207ENST00000549759 AMPD1P23109 780 aa13.1□□□□□ -0.31
PFDN5-207ENST00000549759 KDELR1P24390 212 aa13.1□□□□□ -0.31
PFDN5-207ENST00000549759 PRKCHP24723 683 aa13.1□□□□□ -0.31
PFDN5-207ENST00000549759 ACVRL1P37023 503 aa13.1□□□□□ -0.31
PFDN5-207ENST00000549759 CCZ1BP86790 482 aa13.1□□□□□ -0.31
PFDN5-207ENST00000549759 CCZ1P86791 482 aaPredicted RBP13.1□□□□□ -0.31
PFDN5-207ENST00000549759 TCF15Q12870 199 aa13.1□□□□□ -0.31
PFDN5-207ENST00000549759 SFSWAPQ12872 951 aaKnown RBP13.1□□□□□ -0.31
PFDN5-207ENST00000549759 CAMK2GQ13555 558 aaPredicted RBP13.1□□□□□ -0.31
PFDN5-207ENST00000549759 DPYSL3Q14195 570 aa13.1□□□□□ -0.31
PFDN5-207ENST00000549759 ATP13A4Q4VNC1 1196 aa13.1□□□□□ -0.31
PFDN5-207ENST00000549759 USP39Q53GS9 565 aaKnown RBP13.1□□□□□ -0.31
PFDN5-207ENST00000549759 HEATR6Q6AI08 1181 aaKnown RBP13.1□□□□□ -0.31
PFDN5-207ENST00000549759 VSIG1Q86XK7 387 aa13.1□□□□□ -0.31
PFDN5-207ENST00000549759 RCOR2Q8IZ40 523 aa13.1□□□□□ -0.31
PFDN5-207ENST00000549759 PRSS33Q8NF86 280 aa13.1□□□□□ -0.31
PFDN5-207ENST00000549759 HMGB4Q8WW32 186 aa13.1□□□□□ -0.31
PFDN5-207ENST00000549759 CASKIN2Q8WXE0 1202 aa13.1□□□□□ -0.31
PFDN5-207ENST00000549759 PDLIM2Q96JY6 352 aa13.1□□□□□ -0.31
PFDN5-207ENST00000549759 PSMB7Q99436 277 aa13.1□□□□□ -0.31
PFDN5-207ENST00000549759 POLR3BQ9NW08 1133 aaPredicted RBP13.1□□□□□ -0.31
PFDN5-207ENST00000549759 SALL4Q9UJQ4 1053 aa13.1□□□□□ -0.31
PFDN5-207ENST00000549759 RAD54BQ9Y620 910 aa13.1□□□□□ -0.31
PFDN5-207ENST00000549759 ZDBF2Q9HCK1 2354 aa13.09□□□□□ -0.31
PFDN5-207ENST00000549759 CCDC66A2RUB6 948 aa13.09□□□□□ -0.31
PFDN5-207ENST00000549759 TTC34A8MYJ7 566 aa13.09□□□□□ -0.31
PFDN5-207ENST00000549759 ZNF487B1APH4 448 aa13.09□□□□□ -0.31
PFDN5-207ENST00000549759 ATP9BO43861 1147 aa13.09□□□□□ -0.31
PFDN5-207ENST00000549759 SNAP91O60641 907 aa13.09□□□□□ -0.31
PFDN5-207ENST00000549759 ZNF217O75362 1048 aa13.09□□□□□ -0.31
PFDN5-207ENST00000549759 ACADMP11310 421 aa13.09□□□□□ -0.31
PFDN5-207ENST00000549759 HLA-EP13747 358 aa13.09□□□□□ -0.31
PFDN5-207ENST00000549759 ZFXP17010 805 aaPredicted RBP13.09□□□□□ -0.31
PFDN5-207ENST00000549759 IL4RP24394 825 aa13.09□□□□□ -0.31
PFDN5-207ENST00000549759 CETN2P41208 172 aa13.09□□□□□ -0.31
PFDN5-207ENST00000549759 RECQLP46063 649 aaPredicted RBP13.09□□□□□ -0.31
PFDN5-207ENST00000549759 NUMBP49757 651 aa13.09□□□□□ -0.31
PFDN5-207ENST00000549759 ARSEP51690 589 aa13.09□□□□□ -0.31
PFDN5-207ENST00000549759 SERINC3Q13530 473 aa13.09□□□□□ -0.31
PFDN5-207ENST00000549759 DLG2Q15700 870 aa13.09□□□□□ -0.31
PFDN5-207ENST00000549759 INO80DQ53TQ3 878 aaPredicted RBP13.09□□□□□ -0.31
PFDN5-207ENST00000549759 ANKRD20A8PQ5CZ79 823 aa13.09□□□□□ -0.31
PFDN5-207ENST00000549759 KIAA1211LQ6NV74 962 aa13.09□□□□□ -0.31
PFDN5-207ENST00000549759 ZNF662Q6ZS27 426 aa13.09□□□□□ -0.31
PFDN5-207ENST00000549759 DSG4Q86SJ6 1040 aa13.09□□□□□ -0.31
PFDN5-207ENST00000549759 C11orf74Q86VG3 221 aa13.09□□□□□ -0.31
PFDN5-207ENST00000549759 WDR5BQ86VZ2 330 aa13.09□□□□□ -0.31
PFDN5-207ENST00000549759 RASSF3Q86WH2 238 aa13.09□□□□□ -0.31
PFDN5-207ENST00000549759 CPNE8Q86YQ8 564 aa13.09□□□□□ -0.31
PFDN5-207ENST00000549759 TMPRSS6Q8IU80 811 aa13.09□□□□□ -0.31
PFDN5-207ENST00000549759 LRRC49Q8IUZ0 686 aa13.09□□□□□ -0.31
PFDN5-207ENST00000549759 SH2D3CQ8N5H7 860 aa13.09□□□□□ -0.31
PFDN5-207ENST00000549759 OR2T3Q8NH03 318 aa13.09□□□□□ -0.31
PFDN5-207ENST00000549759 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.09□□□□□ -0.31
PFDN5-207ENST00000549759 RAPGEF5Q92565 580 aa13.09□□□□□ -0.31
PFDN5-207ENST00000549759 TSC1Q92574 1164 aa13.09□□□□□ -0.31
PFDN5-207ENST00000549759 PRCCQ92733 491 aaPredicted RBP13.09□□□□□ -0.31
PFDN5-207ENST00000549759 NELL1Q92832 810 aa13.09□□□□□ -0.31
PFDN5-207ENST00000549759 CEP44Q9C0F1 390 aa13.09□□□□□ -0.31
PFDN5-207ENST00000549759 LRRC19Q9H756 370 aa13.09□□□□□ -0.31
PFDN5-207ENST00000549759 PRSS16Q9NQE7 514 aa13.09□□□□□ -0.31
PFDN5-207ENST00000549759 AMFRQ9UKV5 643 aa13.09□□□□□ -0.31
PFDN5-207ENST00000549759 HYOU1Q9Y4L1 999 aa13.09□□□□□ -0.31
PFDN5-207ENST00000549759 DFFAO00273 331 aa13.08□□□□□ -0.32
PFDN5-207ENST00000549759 DCLK1O15075 740 aa13.08□□□□□ -0.32
PFDN5-207ENST00000549759 ZSCAN12O43309 604 aa13.08□□□□□ -0.32
PFDN5-207ENST00000549759 ZMPSTE24O75844 475 aa13.08□□□□□ -0.32
PFDN5-207ENST00000549759 KRT1P04264 644 aa13.08□□□□□ -0.32
PFDN5-207ENST00000549759 CD48P09326 243 aa13.08□□□□□ -0.32
PFDN5-207ENST00000549759 TDGF1P13385 188 aa13.08□□□□□ -0.32
PFDN5-207ENST00000549759 PXNP49023 591 aaPredicted RBP13.08□□□□□ -0.32
PFDN5-207ENST00000549759 FNTBP49356 437 aa13.08□□□□□ -0.32
PFDN5-207ENST00000549759 STK19P49842 368 aaPredicted RBP13.08□□□□□ -0.32
PFDN5-207ENST00000549759 SERPINH1P50454 418 aaKnown RBP13.08□□□□□ -0.32
PFDN5-207ENST00000549759 PAPOLAP51003 745 aaKnown RBP13.08□□□□□ -0.32
PFDN5-207ENST00000549759 ZBTB16Q05516 673 aa13.08□□□□□ -0.32
PFDN5-207ENST00000549759 CCDC173Q0VFZ6 552 aa13.08□□□□□ -0.32
PFDN5-207ENST00000549759 ELAVL3Q14576 367 aaKnown RBP13.08□□□□□ -0.32
PFDN5-207ENST00000549759 C9orf64Q5T6V5 341 aa13.08□□□□□ -0.32
PFDN5-207ENST00000549759 LINGO4Q6UY18 593 aa13.08□□□□□ -0.32
PFDN5-207ENST00000549759 PEX26Q7Z412 305 aa13.08□□□□□ -0.32
PFDN5-207ENST00000549759 KATNAL2Q8IYT4 538 aa13.08□□□□□ -0.32
PFDN5-207ENST00000549759 UBL4BQ8N7F7 174 aa13.08□□□□□ -0.32
PFDN5-207ENST00000549759 ZBTB44Q8NCP5 570 aa13.08□□□□□ -0.32
PFDN5-207ENST00000549759 MDGA1Q8NFP4 955 aa13.08□□□□□ -0.32
PFDN5-207ENST00000549759 ISG20Q96AZ6 181 aaKnown RBP13.08□□□□□ -0.32
PFDN5-207ENST00000549759 SIPA1Q96FS4 1042 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms