RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 SFSWAPQ12872 951 aaKnown RBP12.58□□□□□ -0.4
DDX54-206ENST00000549271 CLN3Q13286 438 aa12.58□□□□□ -0.4
DDX54-206ENST00000549271 NNTQ13423 1086 aa12.58□□□□□ -0.4
DDX54-206ENST00000549271 CST6Q15828 149 aa12.58□□□□□ -0.4
DDX54-206ENST00000549271 ISXQ2M1V0 245 aa12.58□□□□□ -0.4
DDX54-206ENST00000549271 BEND5Q7L4P6 421 aa12.58□□□□□ -0.4
DDX54-206ENST00000549271 CREBRFQ8IUR6 639 aa12.58□□□□□ -0.4
DDX54-206ENST00000549271 DDX50Q9BQ39 737 aaKnown RBP12.58□□□□□ -0.4
DDX54-206ENST00000549271 THAP9Q9H5L6 903 aa12.58□□□□□ -0.4
DDX54-206ENST00000549271 UBE2TQ9NPD8 197 aaPredicted RBP12.58□□□□□ -0.4
DDX54-206ENST00000549271 SATB2Q9UPW6 733 aa12.58□□□□□ -0.4
DDX54-206ENST00000549271 CLEC18AA5D8T8 446 aa12.57□□□□□ -0.4
DDX54-206ENST00000549271 MAGEC1O60732 1142 aa12.57□□□□□ -0.4
DDX54-206ENST00000549271 TBL1XO60907 577 aa12.57□□□□□ -0.4
DDX54-206ENST00000549271 RNASEH1O60930 286 aaKnown RBP12.57□□□□□ -0.4
DDX54-206ENST00000549271 SIN3BO75182 1162 aa12.57□□□□□ -0.4
DDX54-206ENST00000549271 RNASEH2AO75792 299 aaKnown RBP12.57□□□□□ -0.4
DDX54-206ENST00000549271 ASLP04424 464 aa12.57□□□□□ -0.4
DDX54-206ENST00000549271 FYNP06241 537 aa12.57□□□□□ -0.4
DDX54-206ENST00000549271 GIMD1P0DJR0 217 aa12.57□□□□□ -0.4
DDX54-206ENST00000549271 RBMS1P29558 406 aaKnown RBP12.57□□□□□ -0.4
DDX54-206ENST00000549271 SLC6A4P31645 630 aa12.57□□□□□ -0.4
DDX54-206ENST00000549271 ADPRHP54922 357 aa12.57□□□□□ -0.4
DDX54-206ENST00000549271 TBX4P57082 545 aa12.57□□□□□ -0.4
DDX54-206ENST00000549271 PPP2CBP62714 309 aa12.57□□□□□ -0.4
DDX54-206ENST00000549271 PPP2CAP67775 309 aa12.57□□□□□ -0.4
DDX54-206ENST00000549271 OVGP1Q12889 678 aa12.57□□□□□ -0.4
DDX54-206ENST00000549271 MEA1Q16626 185 aa12.57□□□□□ -0.4
DDX54-206ENST00000549271 C3orf38Q5JPI3 329 aa12.57□□□□□ -0.4
DDX54-206ENST00000549271 RFWD3Q6PCD5 774 aa12.57□□□□□ -0.4
DDX54-206ENST00000549271 GJB7Q6PEY0 223 aa12.57□□□□□ -0.4
DDX54-206ENST00000549271 CLEC18BQ6UXF7 455 aa12.57□□□□□ -0.4
DDX54-206ENST00000549271 AADATQ8N5Z0 425 aa12.57□□□□□ -0.4
DDX54-206ENST00000549271 HJURPQ8NCD3 748 aaPredicted RBP12.57□□□□□ -0.4
DDX54-206ENST00000549271 CLEC18CQ8NCF0 446 aa12.57□□□□□ -0.4
DDX54-206ENST00000549271 WFDC5Q8TCV5 224 aa12.57□□□□□ -0.4
DDX54-206ENST00000549271 SLC39A13Q96H72 371 aa12.57□□□□□ -0.4
DDX54-206ENST00000549271 FCRL2Q96LA5 508 aaPredicted RBP12.57□□□□□ -0.4
DDX54-206ENST00000549271 OMDQ99983 421 aa12.57□□□□□ -0.4
DDX54-206ENST00000549271 SEMA3CQ99985 751 aa12.57□□□□□ -0.4
DDX54-206ENST00000549271 ARHGAP20Q9P2F6 1191 aa12.57□□□□□ -0.4
DDX54-206ENST00000549271 TLR6Q9Y2C9 796 aa12.57□□□□□ -0.4
DDX54-206ENST00000549271 PCDHGA8Q9Y5G5 932 aa12.57□□□□□ -0.4
DDX54-206ENST00000549271 LY6G6EA0A0G2JKS1 128 aa12.56□□□□□ -0.4
DDX54-206ENST00000549271 GOLGA6L7A0A1B0GV03 622 aa12.56□□□□□ -0.4
DDX54-206ENST00000549271 GTPBP10A4D1E9 387 aaKnown RBP12.56□□□□□ -0.4
DDX54-206ENST00000549271 M0QYV0 167 aa12.56□□□□□ -0.4
DDX54-206ENST00000549271 SART1O43290 800 aaKnown RBP12.56□□□□□ -0.4
DDX54-206ENST00000549271 MYF5P13349 255 aa12.56□□□□□ -0.4
DDX54-206ENST00000549271 GOT1P17174 413 aa12.56□□□□□ -0.4
DDX54-206ENST00000549271 CR2P20023 1033 aa12.56□□□□□ -0.4
DDX54-206ENST00000549271 DGKAP23743 735 aa12.56□□□□□ -0.4
DDX54-206ENST00000549271 PON1P27169 355 aa12.56□□□□□ -0.4
DDX54-206ENST00000549271 SLC8A1P32418 973 aa12.56□□□□□ -0.4
DDX54-206ENST00000549271 MTIF2P46199 727 aaKnown RBP12.56□□□□□ -0.4
DDX54-206ENST00000549271 RGS7P49802 495 aa12.56□□□□□ -0.4
DDX54-206ENST00000549271 SERINC3Q13530 473 aa12.56□□□□□ -0.4
DDX54-206ENST00000549271 TPD52L1Q16890 204 aaPredicted RBP12.56□□□□□ -0.4
DDX54-206ENST00000549271 HNRNPA1L2Q32P51 320 aaKnown RBP12.56□□□□□ -0.4
DDX54-206ENST00000549271 MIIPQ5JXC2 388 aa12.56□□□□□ -0.4
DDX54-206ENST00000549271 C9orf64Q5T6V5 341 aa12.56□□□□□ -0.4
DDX54-206ENST00000549271 NADSYN1Q6IA69 706 aa12.56□□□□□ -0.4
DDX54-206ENST00000549271 DPY19L2P1Q6NXN4 242 aa12.56□□□□□ -0.4
DDX54-206ENST00000549271 TRIM65Q6PJ69 517 aa12.56□□□□□ -0.4
DDX54-206ENST00000549271 GBP6Q6ZN66 633 aa12.56□□□□□ -0.4
DDX54-206ENST00000549271 RBM43Q6ZSC3 357 aaKnown RBP12.56□□□□□ -0.4
DDX54-206ENST00000549271 SND1Q7KZF4 910 aaKnown RBP eCLIP12.56□□□□□ -0.4
DDX54-206ENST00000549271 TMC6Q7Z403 805 aa12.56□□□□□ -0.4
DDX54-206ENST00000549271 CLEC14AQ86T13 490 aa12.56□□□□□ -0.4
DDX54-206ENST00000549271 MMAAQ8IVH4 418 aaKnown RBP12.56□□□□□ -0.4
DDX54-206ENST00000549271 MFN1Q8IWA4 741 aa12.56□□□□□ -0.4
DDX54-206ENST00000549271 STK32AQ8WU08 396 aa12.56□□□□□ -0.4
DDX54-206ENST00000549271 MRGPRX3Q96LB0 322 aa12.56□□□□□ -0.4
DDX54-206ENST00000549271 PRICKLE1Q96MT3 831 aaPredicted RBP12.56□□□□□ -0.4
DDX54-206ENST00000549271 SERPINB11Q96P15 392 aa12.56□□□□□ -0.4
DDX54-206ENST00000549271 GBP4Q96PP9 640 aa12.56□□□□□ -0.4
DDX54-206ENST00000549271 CCNL2Q96S94 520 aaPredicted RBP12.56□□□□□ -0.4
DDX54-206ENST00000549271 SIX2Q9NPC8 291 aa12.56□□□□□ -0.4
DDX54-206ENST00000549271 UCKL1Q9NWZ5 548 aa12.56□□□□□ -0.4
DDX54-206ENST00000549271 INTS6Q9UL03 887 aaKnown RBP12.56□□□□□ -0.4
DDX54-206ENST00000549271 U3KQA8 63 aa12.56□□□□□ -0.4
DDX54-206ENST00000549271 ANKRD17O75179 2603 aaKnown RBP12.56□□□□□ -0.4
DDX54-206ENST00000549271 NBASA2RRP1 2371 aa12.55□□□□□ -0.4
DDX54-206ENST00000549271 TARSL2A2RTX5 802 aaKnown RBP12.55□□□□□ -0.4
DDX54-206ENST00000549271 TYW5A2RUC4 315 aaKnown RBP12.55□□□□□ -0.4
DDX54-206ENST00000549271 BECN2A8MW95 431 aa12.55□□□□□ -0.4
DDX54-206ENST00000549271 ITGB2P05107 769 aa12.55□□□□□ -0.4
DDX54-206ENST00000549271 SRPRAP08240 638 aaKnown RBP12.55□□□□□ -0.4
DDX54-206ENST00000549271 KRT5P13647 590 aa12.55□□□□□ -0.4
DDX54-206ENST00000549271 CSKP41240 450 aa12.55□□□□□ -0.4
DDX54-206ENST00000549271 GPD2P43304 727 aa12.55□□□□□ -0.4
DDX54-206ENST00000549271 ST8SIA6P61647 398 aa12.55□□□□□ -0.4
DDX54-206ENST00000549271 TLE1Q04724 770 aa12.55□□□□□ -0.4
DDX54-206ENST00000549271 MAN2A1Q16706 1144 aa12.55□□□□□ -0.4
DDX54-206ENST00000549271 EXOC3L4Q17RC7 722 aa12.55□□□□□ -0.4
DDX54-206ENST00000549271 ZSCAN23Q3MJ62 389 aa12.55□□□□□ -0.4
DDX54-206ENST00000549271 HS1BP3Q53T59 392 aa12.55□□□□□ -0.4
DDX54-206ENST00000549271 HSP90AA4PQ58FG1 418 aa12.55□□□□□ -0.4
DDX54-206ENST00000549271 MS4A13Q5J8X5 152 aa12.55□□□□□ -0.4
DDX54-206ENST00000549271 CT47A1Q5JQC4 288 aaPredicted RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms