RNA–Protein interactions for RNA: ENST00000548771.1

CCDC38-206, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 470 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-206ENST00000548771 KSR2Q6VAB6 950 aa4.36□□□□□ -1.71
CCDC38-206ENST00000548771 ARMC9Q7Z3E5 817 aa4.36□□□□□ -1.71
CCDC38-206ENST00000548771 CCDC25Q86WR0 208 aa4.36□□□□□ -1.71
CCDC38-206ENST00000548771 GATAD2AQ86YP4 633 aa4.36□□□□□ -1.71
CCDC38-206ENST00000548771 SYTL1Q8IYJ3 562 aa4.36□□□□□ -1.71
CCDC38-206ENST00000548771 NEXN-AS1Q8NBZ9 246 aa4.36□□□□□ -1.71
CCDC38-206ENST00000548771 SLC2A12Q8TD20 617 aa4.36□□□□□ -1.71
CCDC38-206ENST00000548771 WFIKKN2Q8TEU8 576 aa4.36□□□□□ -1.71
CCDC38-206ENST00000548771 MUL1Q969V5 352 aa4.36□□□□□ -1.71
CCDC38-206ENST00000548771 SLITRK1Q96PX8 696 aa4.36□□□□□ -1.71
CCDC38-206ENST00000548771 HDHD5Q9BXW7 423 aa4.36□□□□□ -1.71
CCDC38-206ENST00000548771 ARNT2Q9HBZ2 717 aa4.36□□□□□ -1.71
CCDC38-206ENST00000548771 LIN7CQ9NUP9 197 aaKnown RBP4.36□□□□□ -1.71
CCDC38-206ENST00000548771 ARL15Q9NXU5 204 aa4.36□□□□□ -1.71
CCDC38-206ENST00000548771 FZD10Q9ULW2 581 aa4.36□□□□□ -1.71
CCDC38-206ENST00000548771 A0A087WYN8 130 aa4.35□□□□□ -1.71
CCDC38-206ENST00000548771 AGAP5A6NIR3 686 aa4.35□□□□□ -1.71
CCDC38-206ENST00000548771 SRRM3A6NNA2 597 aaPredicted RBP4.35□□□□□ -1.71
CCDC38-206ENST00000548771 UNGP13051 313 aaPredicted RBP4.35□□□□□ -1.71
CCDC38-206ENST00000548771 PKMP14618 531 aaKnown RBP4.35□□□□□ -1.71
CCDC38-206ENST00000548771 KLRC2P26717 231 aa4.35□□□□□ -1.71
CCDC38-206ENST00000548771 ART1P52961 327 aa4.35□□□□□ -1.71
CCDC38-206ENST00000548771 GAS1P54826 345 aa4.35□□□□□ -1.71
CCDC38-206ENST00000548771 KRTAP10-5P60370 271 aa4.35□□□□□ -1.71
CCDC38-206ENST00000548771 RPL36AP83881 106 aaKnown RBP4.35□□□□□ -1.71
CCDC38-206ENST00000548771 TRAF3Q13114 568 aa4.35□□□□□ -1.71
CCDC38-206ENST00000548771 DCTN1Q14203 1278 aa4.35□□□□□ -1.71
CCDC38-206ENST00000548771 TDRD12Q587J7 1177 aaKnown RBP4.35□□□□□ -1.71
CCDC38-206ENST00000548771 C16orf82Q7Z2V1 217 aa4.35□□□□□ -1.71
CCDC38-206ENST00000548771 ANKS1BQ7Z6G8 1248 aa4.35□□□□□ -1.71
CCDC38-206ENST00000548771 HMGB4Q8WW32 186 aa4.35□□□□□ -1.71
CCDC38-206ENST00000548771 TMEM120AQ9BXJ8 343 aa4.35□□□□□ -1.71
CCDC38-206ENST00000548771 TM6SF1Q9BZW5 370 aa4.35□□□□□ -1.71
CCDC38-206ENST00000548771 ABHD16BQ9H3Z7 469 aa4.35□□□□□ -1.71
CCDC38-206ENST00000548771 C6orf106Q9H6K1 298 aaPredicted RBP4.35□□□□□ -1.71
CCDC38-206ENST00000548771 CATSPERBQ9H7T0 1116 aa4.35□□□□□ -1.71
CCDC38-206ENST00000548771 ACTR5Q9H9F9 607 aaPredicted RBP4.35□□□□□ -1.71
CCDC38-206ENST00000548771 MS4A18H0YCH9 400 aa4.34□□□□□ -1.71
CCDC38-206ENST00000548771 LDB2O43679 373 aa4.34□□□□□ -1.71
CCDC38-206ENST00000548771 TNFRSF6BO95407 300 aa4.34□□□□□ -1.71
CCDC38-206ENST00000548771 HLA-DQA2P01906 255 aa4.34□□□□□ -1.71
CCDC38-206ENST00000548771 CYP21A2P08686 494 aa4.34□□□□□ -1.71
CCDC38-206ENST00000548771 PPM1AP35813 382 aa4.34□□□□□ -1.71
CCDC38-206ENST00000548771 NEK3P51956 506 aa4.34□□□□□ -1.71
CCDC38-206ENST00000548771 PNLIPRP1P54315 467 aa4.34□□□□□ -1.71
CCDC38-206ENST00000548771 SEC61A1P61619 476 aaKnown RBP4.34□□□□□ -1.71
CCDC38-206ENST00000548771 TBRG1Q3YBR2 411 aa4.34□□□□□ -1.71
CCDC38-206ENST00000548771 TTC22Q5TAA0 569 aa4.34□□□□□ -1.71
CCDC38-206ENST00000548771 CCDC181Q5TID7 509 aa4.34□□□□□ -1.71
CCDC38-206ENST00000548771 C9orf57Q5W0N0 161 aa4.34□□□□□ -1.71
CCDC38-206ENST00000548771 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.34□□□□□ -1.71
CCDC38-206ENST00000548771 SRLQ86TD4 932 aa4.34□□□□□ -1.71
CCDC38-206ENST00000548771 TMEM163Q8TC26 289 aa4.34□□□□□ -1.71
CCDC38-206ENST00000548771 HDAC7Q8WUI4 952 aa4.34□□□□□ -1.71
CCDC38-206ENST00000548771 KATNAL1Q9BW62 490 aa4.34□□□□□ -1.71
CCDC38-206ENST00000548771 CDT1Q9H211 546 aa4.34□□□□□ -1.71
CCDC38-206ENST00000548771 PDE11AQ9HCR9 933 aa4.34□□□□□ -1.71
CCDC38-206ENST00000548771 CHST12Q9NRB3 414 aa4.34□□□□□ -1.71
CCDC38-206ENST00000548771 DAPP1Q9UN19 280 aa4.34□□□□□ -1.71
CCDC38-206ENST00000548771 RCE1Q9Y256 329 aa4.34□□□□□ -1.71
CCDC38-206ENST00000548771 NPIPB13A6NJU9 1138 aa4.33□□□□□ -1.72
CCDC38-206ENST00000548771 NPIPB5A8MRT5 1133 aa4.33□□□□□ -1.72
CCDC38-206ENST00000548771 BTBD18B2RXH4 712 aa4.33□□□□□ -1.72
CCDC38-206ENST00000548771 NPIPB4C9JG80 1138 aa4.33□□□□□ -1.72
CCDC38-206ENST00000548771 CAND2O75155 1236 aa4.33□□□□□ -1.72
CCDC38-206ENST00000548771 MYZAPP0CAP1 466 aa4.33□□□□□ -1.72
CCDC38-206ENST00000548771 GYS1P13807 737 aa4.33□□□□□ -1.72
CCDC38-206ENST00000548771 PPP3CCP48454 512 aa4.33□□□□□ -1.72
CCDC38-206ENST00000548771 BTKQ06187 659 aa4.33□□□□□ -1.72
CCDC38-206ENST00000548771 ZNF284Q2VY69 593 aa4.33□□□□□ -1.72
CCDC38-206ENST00000548771 FSCBQ5H9T9 825 aa4.33□□□□□ -1.72
CCDC38-206ENST00000548771 PRAMEF19Q5SWL8 479 aa4.33□□□□□ -1.72
CCDC38-206ENST00000548771 FAM171A1Q5VUB5 890 aa4.33□□□□□ -1.72
CCDC38-206ENST00000548771 NFRKBQ6P4R8 1299 aa4.33□□□□□ -1.72
CCDC38-206ENST00000548771 ZDHHC23Q8IYP9 409 aa4.33□□□□□ -1.72
CCDC38-206ENST00000548771 DPP10Q8N608 796 aa4.33□□□□□ -1.72
CCDC38-206ENST00000548771 LRRC57Q8N9N7 239 aa4.33□□□□□ -1.72
CCDC38-206ENST00000548771 ZNF333Q96JL9 665 aa4.33□□□□□ -1.72
CCDC38-206ENST00000548771 APOLD1Q96LR9 279 aa4.33□□□□□ -1.72
CCDC38-206ENST00000548771 FRG2BQ96QU4 278 aa4.33□□□□□ -1.72
CCDC38-206ENST00000548771 OBP2BQ9NPH6 170 aa4.33□□□□□ -1.72
CCDC38-206ENST00000548771 IL36RNQ9UBH0 155 aa4.33□□□□□ -1.72
CCDC38-206ENST00000548771 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.32□□□□□ -1.72
CCDC38-206ENST00000548771 EFCAB8A8MWE9 144 aa4.32□□□□□ -1.72
CCDC38-206ENST00000548771 GRM8O00222 908 aa4.32□□□□□ -1.72
CCDC38-206ENST00000548771 VWA5AO00534 786 aa4.32□□□□□ -1.72
CCDC38-206ENST00000548771 FFAR2O15552 330 aa4.32□□□□□ -1.72
CCDC38-206ENST00000548771 ZBTB11O95625 1053 aaPredicted RBP4.32□□□□□ -1.72
CCDC38-206ENST00000548771 NBPF7P0C2Y1 421 aaPredicted RBP4.32□□□□□ -1.72
CCDC38-206ENST00000548771 FCGR1AP12314 374 aa4.32□□□□□ -1.72
CCDC38-206ENST00000548771 PRKCHP24723 683 aa4.32□□□□□ -1.72
CCDC38-206ENST00000548771 TYK2P29597 1187 aa4.32□□□□□ -1.72
CCDC38-206ENST00000548771 AVPR1AP37288 418 aa4.32□□□□□ -1.72
CCDC38-206ENST00000548771 TECP42680 631 aa4.32□□□□□ -1.72
CCDC38-206ENST00000548771 ERVFC1-1P60608 527 aa4.32□□□□□ -1.72
CCDC38-206ENST00000548771 RNASELQ05823 741 aaKnown RBP4.32□□□□□ -1.72
CCDC38-206ENST00000548771 CDK18Q07002 472 aa4.32□□□□□ -1.72
CCDC38-206ENST00000548771 GALNT1Q10472 559 aaPredicted RBP4.32□□□□□ -1.72
CCDC38-206ENST00000548771 PICALMQ13492 652 aa4.32□□□□□ -1.72
CCDC38-206ENST00000548771 ZACNQ401N2 412 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms