RNA–Protein interactions for RNA: ENST00000547263.1

GCN1-202, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-202ENST00000547263 C2orf49Q9BVC5 232 aaPredicted RBP11.2□□□□□ -0.62
GCN1-202ENST00000547263 NUP85Q9BW27 656 aa11.2□□□□□ -0.62
GCN1-202ENST00000547263 PCED1AQ9H1Q7 454 aa11.2□□□□□ -0.62
GCN1-202ENST00000547263 MTG2Q9H4K7 406 aa11.2□□□□□ -0.62
GCN1-202ENST00000547263 LRRC19Q9H756 370 aa11.2□□□□□ -0.62
GCN1-202ENST00000547263 ZNHIT6Q9NWK9 470 aaKnown RBP11.2□□□□□ -0.62
GCN1-202ENST00000547263 BCCIPQ9P287 314 aaKnown RBP eCLIP11.2□□□□□ -0.62
GCN1-202ENST00000547263 MYO1AQ9UBC5 1043 aa11.2□□□□□ -0.62
GCN1-202ENST00000547263 IP6K2Q9UHH9 426 aa11.2□□□□□ -0.62
GCN1-202ENST00000547263 RAB23Q9ULC3 237 aa11.2□□□□□ -0.62
GCN1-202ENST00000547263 AP4E1Q9UPM8 1137 aa11.2□□□□□ -0.62
GCN1-202ENST00000547263 MCF2LO15068 1137 aa11.19□□□□□ -0.62
GCN1-202ENST00000547263 FGF10O15520 208 aaPredicted RBP11.19□□□□□ -0.62
GCN1-202ENST00000547263 MT-CO1P00395 513 aa11.19□□□□□ -0.62
GCN1-202ENST00000547263 ZNF806P0C7X5 589 aa11.19□□□□□ -0.62
GCN1-202ENST00000547263 VAV1P15498 845 aa11.19□□□□□ -0.62
GCN1-202ENST00000547263 TCF4P15884 667 aa11.19□□□□□ -0.62
GCN1-202ENST00000547263 DESP17661 470 aa11.19□□□□□ -0.62
GCN1-202ENST00000547263 GLDCP23378 1020 aa11.19□□□□□ -0.62
GCN1-202ENST00000547263 EPHB2P29323 1055 aa11.19□□□□□ -0.62
GCN1-202ENST00000547263 CDC25BP30305 580 aa11.19□□□□□ -0.62
GCN1-202ENST00000547263 MAN1A1P33908 653 aa11.19□□□□□ -0.62
GCN1-202ENST00000547263 HOXD12P35452 270 aa11.19□□□□□ -0.62
GCN1-202ENST00000547263 ETFBP38117 255 aa11.19□□□□□ -0.62
GCN1-202ENST00000547263 SERPINH1P50454 418 aaKnown RBP11.19□□□□□ -0.62
GCN1-202ENST00000547263 ARSEP51690 589 aa11.19□□□□□ -0.62
GCN1-202ENST00000547263 KRT83P78385 493 aa11.19□□□□□ -0.62
GCN1-202ENST00000547263 DPYSQ14117 519 aa11.19□□□□□ -0.62
GCN1-202ENST00000547263 NUMA1Q14980 2115 aa11.19□□□□□ -0.62
GCN1-202ENST00000547263 ELF2Q15723 593 aa11.19□□□□□ -0.62
GCN1-202ENST00000547263 LPAL2Q16609 132 aa11.19□□□□□ -0.62
GCN1-202ENST00000547263 BOLA3Q53S33 107 aa11.19□□□□□ -0.62
GCN1-202ENST00000547263 ZNF776Q68DI1 518 aaPredicted RBP11.19□□□□□ -0.62
GCN1-202ENST00000547263 TXNRD3NBQ6F5E7 133 aa11.19□□□□□ -0.62
GCN1-202ENST00000547263 SCYL2Q6P3W7 929 aa11.19□□□□□ -0.62
GCN1-202ENST00000547263 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.19□□□□□ -0.62
GCN1-202ENST00000547263 SLC41A1Q8IVJ1 513 aa11.19□□□□□ -0.62
GCN1-202ENST00000547263 CADM4Q8NFZ8 388 aa11.19□□□□□ -0.62
GCN1-202ENST00000547263 ZNF564Q8TBZ8 553 aaPredicted RBP11.19□□□□□ -0.62
GCN1-202ENST00000547263 DNASE2BQ8WZ79 361 aa11.19□□□□□ -0.62
GCN1-202ENST00000547263 ISG20Q96AZ6 181 aaKnown RBP11.19□□□□□ -0.62
GCN1-202ENST00000547263 PANX2Q96RD6 677 aa11.19□□□□□ -0.62
GCN1-202ENST00000547263 KCTD15Q96SI1 283 aaPredicted RBP11.19□□□□□ -0.62
GCN1-202ENST00000547263 EPAS1Q99814 870 aa11.19□□□□□ -0.62
GCN1-202ENST00000547263 CEP44Q9C0F1 390 aa11.19□□□□□ -0.62
GCN1-202ENST00000547263 LCMT1Q9UIC8 334 aa11.19□□□□□ -0.62
GCN1-202ENST00000547263 ANAPC7Q9UJX3 599 aa11.19□□□□□ -0.62
GCN1-202ENST00000547263 VPS28Q9UK41 221 aa11.19□□□□□ -0.62
GCN1-202ENST00000547263 GMEB2Q9UKD1 530 aa11.19□□□□□ -0.62
GCN1-202ENST00000547263 SMAD6O43541 496 aaKnown RBP11.18□□□□□ -0.62
GCN1-202ENST00000547263 RARAP10276 462 aa11.18□□□□□ -0.62
GCN1-202ENST00000547263 CD6P30203 668 aa11.18□□□□□ -0.62
GCN1-202ENST00000547263 OXTRP30559 389 aa11.18□□□□□ -0.62
GCN1-202ENST00000547263 DRD3P35462 400 aa11.18□□□□□ -0.62
GCN1-202ENST00000547263 ACVRL1P37023 503 aa11.18□□□□□ -0.62
GCN1-202ENST00000547263 NNMTP40261 264 aa11.18□□□□□ -0.62
GCN1-202ENST00000547263 PTGER3P43115 390 aa11.18□□□□□ -0.62
GCN1-202ENST00000547263 NDST2P52849 883 aa11.18□□□□□ -0.62
GCN1-202ENST00000547263 DLG2Q15700 870 aa11.18□□□□□ -0.62
GCN1-202ENST00000547263 CST6Q15828 149 aa11.18□□□□□ -0.62
GCN1-202ENST00000547263 DAB2IPQ5VWQ8 1189 aa11.18□□□□□ -0.62
GCN1-202ENST00000547263 KIAA1324Q6UXG2 1013 aaKnown RBP11.18□□□□□ -0.62
GCN1-202ENST00000547263 LPCAT2Q7L5N7 544 aa11.18□□□□□ -0.62
GCN1-202ENST00000547263 POLNQ7Z5Q5 900 aa11.18□□□□□ -0.62
GCN1-202ENST00000547263 TMEM139Q8IV31 216 aa11.18□□□□□ -0.62
GCN1-202ENST00000547263 ARHGAP12Q8IWW6 846 aa11.18□□□□□ -0.62
GCN1-202ENST00000547263 CCDC170Q8IYT3 715 aa11.18□□□□□ -0.62
GCN1-202ENST00000547263 PGBD3Q8N328 593 aa11.18□□□□□ -0.62
GCN1-202ENST00000547263 OR2A12Q8NGT7 310 aa11.18□□□□□ -0.62
GCN1-202ENST00000547263 C1orf216Q8TAB5 229 aa11.18□□□□□ -0.62
GCN1-202ENST00000547263 CTNNBL1Q8WYA6 563 aaPredicted RBP11.18□□□□□ -0.62
GCN1-202ENST00000547263 BTBD6Q96KE9 485 aa11.18□□□□□ -0.62
GCN1-202ENST00000547263 CCDC42Q96M95 316 aa11.18□□□□□ -0.62
GCN1-202ENST00000547263 MUC3BQ9H195 1237 aa11.18□□□□□ -0.62
GCN1-202ENST00000547263 PABPC3Q9H361 631 aaKnown RBP11.18□□□□□ -0.62
GCN1-202ENST00000547263 CATSPERBQ9H7T0 1116 aa11.18□□□□□ -0.62
GCN1-202ENST00000547263 PDFQ9HBH1 243 aa11.18□□□□□ -0.62
GCN1-202ENST00000547263 SEMA4GQ9NTN9 838 aa11.18□□□□□ -0.62
GCN1-202ENST00000547263 SPTLC3Q9NUV7 552 aa11.18□□□□□ -0.62
GCN1-202ENST00000547263 GPATCH2LQ9NWQ4 482 aa11.18□□□□□ -0.62
GCN1-202ENST00000547263 CWC15Q9P013 229 aaKnown RBP11.18□□□□□ -0.62
GCN1-202ENST00000547263 NCDNQ9UBB6 729 aa11.18□□□□□ -0.62
GCN1-202ENST00000547263 EVLQ9UI08 416 aaPredicted RBP11.18□□□□□ -0.62
GCN1-202ENST00000547263 SLC25A13Q9UJS0 675 aa11.18□□□□□ -0.62
GCN1-202ENST00000547263 PILRBQ9UKJ0 227 aa11.18□□□□□ -0.62
GCN1-202ENST00000547263 PPM1HQ9ULR3 514 aa11.18□□□□□ -0.62
GCN1-202ENST00000547263 FZD4Q9ULV1 537 aa11.18□□□□□ -0.62
GCN1-202ENST00000547263 CYP8B1Q9UNU6 501 aa11.18□□□□□ -0.62
GCN1-202ENST00000547263 INVSQ9Y283 1065 aa11.18□□□□□ -0.62
GCN1-202ENST00000547263 PTPRZ1P23471 2315 aaPredicted RBP11.18□□□□□ -0.62
GCN1-202ENST00000547263 PI4KAP42356 2102 aa11.17□□□□□ -0.62
GCN1-202ENST00000547263 ZSCAN5CA6NGD5 496 aaPredicted RBP11.17□□□□□ -0.62
GCN1-202ENST00000547263 METTL12A8MUP2 240 aa11.17□□□□□ -0.62
GCN1-202ENST00000547263 K7ERQ8 282 aa11.17□□□□□ -0.62
GCN1-202ENST00000547263 MYO1FO00160 1098 aa11.17□□□□□ -0.62
GCN1-202ENST00000547263 ZBTB24O43167 697 aaPredicted RBP11.17□□□□□ -0.62
GCN1-202ENST00000547263 KDELR3O43731 214 aa11.17□□□□□ -0.62
GCN1-202ENST00000547263 AKR1B10O60218 316 aa11.17□□□□□ -0.62
GCN1-202ENST00000547263 PRPSAP2O60256 369 aa11.17□□□□□ -0.62
GCN1-202ENST00000547263 FOXD2O60548 495 aaPredicted RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms