RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 RBL1P28749 1068 aa16.18■□□□□ 0.18
TRAFD1-203ENST00000547063 DGKGP49619 791 aa16.18■□□□□ 0.18
TRAFD1-203ENST00000547063 RENBPP51606 427 aa16.18■□□□□ 0.18
TRAFD1-203ENST00000547063 LMAN2Q12907 356 aa16.18■□□□□ 0.18
TRAFD1-203ENST00000547063 HNRNPDQ14103 355 aaKnown RBP16.18■□□□□ 0.18
TRAFD1-203ENST00000547063 P3H1Q32P28 736 aa16.18■□□□□ 0.18
TRAFD1-203ENST00000547063 PLEKHG6Q3KR16 790 aa16.18■□□□□ 0.18
TRAFD1-203ENST00000547063 FSCBQ5H9T9 825 aa16.18■□□□□ 0.18
TRAFD1-203ENST00000547063 TEX35Q5T0J7 233 aa16.18■□□□□ 0.18
TRAFD1-203ENST00000547063 RETSATQ6NUM9 610 aa16.18■□□□□ 0.18
TRAFD1-203ENST00000547063 NUDT18Q6ZVK8 323 aa16.18■□□□□ 0.18
TRAFD1-203ENST00000547063 AHI1Q8N157 1196 aa16.18■□□□□ 0.18
TRAFD1-203ENST00000547063 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.18■□□□□ 0.18
TRAFD1-203ENST00000547063 FAM71DQ8N9W8 422 aa16.18■□□□□ 0.18
TRAFD1-203ENST00000547063 NOA1Q8NC60 698 aaKnown RBP16.18■□□□□ 0.18
TRAFD1-203ENST00000547063 DNASE1L2Q92874 299 aa16.18■□□□□ 0.18
TRAFD1-203ENST00000547063 P2RY11Q96G91 374 aa16.18■□□□□ 0.18
TRAFD1-203ENST00000547063 RPP25Q9BUL9 199 aaKnown RBP16.18■□□□□ 0.18
TRAFD1-203ENST00000547063 USP29Q9HBJ7 922 aa16.18■□□□□ 0.18
TRAFD1-203ENST00000547063 PCDH9Q9HC56 1237 aa16.18■□□□□ 0.18
TRAFD1-203ENST00000547063 ABCB8Q9NUT2 735 aa16.18■□□□□ 0.18
TRAFD1-203ENST00000547063 DNAJC17Q9NVM6 304 aaKnown RBP16.18■□□□□ 0.18
TRAFD1-203ENST00000547063 THEGQ9P2T0 379 aa16.18■□□□□ 0.18
TRAFD1-203ENST00000547063 DEC1Q9P2X7 70 aa16.18■□□□□ 0.18
TRAFD1-203ENST00000547063 GGA2Q9UJY4 613 aa16.18■□□□□ 0.18
TRAFD1-203ENST00000547063 TRHDEQ9UKU6 1024 aa16.18■□□□□ 0.18
TRAFD1-203ENST00000547063 SLC27A6Q9Y2P4 619 aa16.18■□□□□ 0.18
TRAFD1-203ENST00000547063 UTP11Q9Y3A2 253 aaKnown RBP16.18■□□□□ 0.18
TRAFD1-203ENST00000547063 MYOFQ9NZM1 2061 aa16.18■□□□□ 0.18
TRAFD1-203ENST00000547063 C5orf60A6NFR6 353 aa16.17■□□□□ 0.18
TRAFD1-203ENST00000547063 CBX4O00257 560 aa16.17■□□□□ 0.18
TRAFD1-203ENST00000547063 RAD51CO43502 376 aa16.17■□□□□ 0.18
TRAFD1-203ENST00000547063 OPHN1O60890 802 aa16.17■□□□□ 0.18
TRAFD1-203ENST00000547063 IFNB1P01574 187 aa16.17■□□□□ 0.18
TRAFD1-203ENST00000547063 KRT14P02533 472 aa16.17■□□□□ 0.18
TRAFD1-203ENST00000547063 PABPC1P11940 636 aaKnown RBP16.17■□□□□ 0.18
TRAFD1-203ENST00000547063 CCNB1P14635 433 aa16.17■□□□□ 0.18
TRAFD1-203ENST00000547063 ACVRL1P37023 503 aa16.17■□□□□ 0.18
TRAFD1-203ENST00000547063 CSKP41240 450 aa16.17■□□□□ 0.18
TRAFD1-203ENST00000547063 IFI35P80217 286 aaPredicted RBP16.17■□□□□ 0.18
TRAFD1-203ENST00000547063 PFKPQ01813 784 aa16.17■□□□□ 0.18
TRAFD1-203ENST00000547063 TNK2Q07912 1038 aa16.17■□□□□ 0.18
TRAFD1-203ENST00000547063 SLC20A2Q08357 652 aa16.17■□□□□ 0.18
TRAFD1-203ENST00000547063 RFTN1Q14699 578 aaPredicted RBP16.17■□□□□ 0.18
TRAFD1-203ENST00000547063 E2F5Q15329 346 aa16.17■□□□□ 0.18
TRAFD1-203ENST00000547063 GRAMD4Q6IC98 578 aa16.17■□□□□ 0.18
TRAFD1-203ENST00000547063 JAMLQ86YT9 394 aa16.17■□□□□ 0.18
TRAFD1-203ENST00000547063 SUGP1Q8IWZ8 645 aaKnown RBP16.17■□□□□ 0.18
TRAFD1-203ENST00000547063 TP53INP2Q8IXH6 220 aa16.17■□□□□ 0.18
TRAFD1-203ENST00000547063 ETFBKMTQ8IXQ9 262 aa16.17■□□□□ 0.18
TRAFD1-203ENST00000547063 SLC44A3Q8N4M1 653 aa16.17■□□□□ 0.18
TRAFD1-203ENST00000547063 CCDC33Q8N5R6 958 aa16.17■□□□□ 0.18
TRAFD1-203ENST00000547063 ST13P5Q8NFI4 369 aaPredicted RBP16.17■□□□□ 0.18
TRAFD1-203ENST00000547063 OR7D4Q8NG98 312 aa16.17■□□□□ 0.18
TRAFD1-203ENST00000547063 WFDC5Q8TCV5 224 aa16.17■□□□□ 0.18
TRAFD1-203ENST00000547063 CASKIN2Q8WXE0 1202 aa16.17■□□□□ 0.18
TRAFD1-203ENST00000547063 SEPT10Q9P0V9 454 aa16.17■□□□□ 0.18
TRAFD1-203ENST00000547063 PAK5Q9P286 719 aa16.17■□□□□ 0.18
TRAFD1-203ENST00000547063 OR51B4Q9Y5P0 310 aa16.17■□□□□ 0.18
TRAFD1-203ENST00000547063 NYNRINQ9P2P1 1898 aaKnown RBP16.16■□□□□ 0.18
TRAFD1-203ENST00000547063 A0A0A0MRY4 1105 aa16.16■□□□□ 0.18
TRAFD1-203ENST00000547063 LOC730098B7Z3J9 87 aa16.16■□□□□ 0.18
TRAFD1-203ENST00000547063 RNF103O00237 685 aa16.16■□□□□ 0.18
TRAFD1-203ENST00000547063 ARNTLO00327 626 aa16.16■□□□□ 0.18
TRAFD1-203ENST00000547063 TTI1O43156 1089 aa16.16■□□□□ 0.18
TRAFD1-203ENST00000547063 TIMM44O43615 452 aa16.16■□□□□ 0.18
TRAFD1-203ENST00000547063 TULP3O75386 442 aa16.16■□□□□ 0.18
TRAFD1-203ENST00000547063 GCATO75600 419 aa16.16■□□□□ 0.18
TRAFD1-203ENST00000547063 MZF1P28698 734 aaPredicted RBP16.16■□□□□ 0.18
TRAFD1-203ENST00000547063 HLA-FP30511 346 aa16.16■□□□□ 0.18
TRAFD1-203ENST00000547063 CD70P32970 193 aa16.16■□□□□ 0.18
TRAFD1-203ENST00000547063 GJA4P35212 333 aa16.16■□□□□ 0.18
TRAFD1-203ENST00000547063 PTGIRP43119 386 aa16.16■□□□□ 0.18
TRAFD1-203ENST00000547063 CLCN6P51797 869 aa16.16■□□□□ 0.18
TRAFD1-203ENST00000547063 TFF2Q03403 129 aa16.16■□□□□ 0.18
TRAFD1-203ENST00000547063 PTK6Q13882 451 aa16.16■□□□□ 0.18
TRAFD1-203ENST00000547063 TEX44Q53QW1 395 aa16.16■□□□□ 0.18
TRAFD1-203ENST00000547063 PITRM1Q5JRX3 1037 aa16.16■□□□□ 0.18
TRAFD1-203ENST00000547063 MARC1Q5VT66 337 aa16.16■□□□□ 0.18
TRAFD1-203ENST00000547063 ITPRIPL1Q6GPH6 555 aa16.16■□□□□ 0.18
TRAFD1-203ENST00000547063 KIAA0907Q7Z7F0 614 aaPredicted RBP16.16■□□□□ 0.18
TRAFD1-203ENST00000547063 ADHFE1Q8IWW8 467 aa16.16■□□□□ 0.18
TRAFD1-203ENST00000547063 NAT16Q8N8M0 369 aa16.16■□□□□ 0.18
TRAFD1-203ENST00000547063 NETO2Q8NC67 525 aa16.16■□□□□ 0.18
TRAFD1-203ENST00000547063 OR52K2Q8NGK3 314 aa16.16■□□□□ 0.18
TRAFD1-203ENST00000547063 MAML1Q92585 1016 aa16.16■□□□□ 0.18
TRAFD1-203ENST00000547063 RUBCNQ92622 972 aa16.16■□□□□ 0.18
TRAFD1-203ENST00000547063 ALG14Q96F25 216 aa16.16■□□□□ 0.18
TRAFD1-203ENST00000547063 LMLNQ96KR4 655 aa16.16■□□□□ 0.18
TRAFD1-203ENST00000547063 SPATA13Q96N96 652 aa16.16■□□□□ 0.18
TRAFD1-203ENST00000547063 PPP1R2P1Q96PQ5 205 aa16.16■□□□□ 0.18
TRAFD1-203ENST00000547063 LRRC1Q9BTT6 524 aa16.16■□□□□ 0.18
TRAFD1-203ENST00000547063 GTSE1Q9NYZ3 720 aa16.16■□□□□ 0.18
TRAFD1-203ENST00000547063 UBA2Q9UBT2 640 aaPredicted RBP16.16■□□□□ 0.18
TRAFD1-203ENST00000547063 CLEC4EQ9ULY5 219 aa16.16■□□□□ 0.18
TRAFD1-203ENST00000547063 SHROOM3Q8TF72 1996 aa16.16■□□□□ 0.18
TRAFD1-203ENST00000547063 TARSL2A2RTX5 802 aaKnown RBP16.15■□□□□ 0.18
TRAFD1-203ENST00000547063 KCNK1O00180 336 aa16.15■□□□□ 0.18
TRAFD1-203ENST00000547063 ASLP04424 464 aa16.15■□□□□ 0.18
TRAFD1-203ENST00000547063 ATP5BP06576 529 aaKnown RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms