RNA–Protein interactions for RNA: ENST00000546849.1

NPAS3-204, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 3

Gene NPAS3, Length 464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-204ENST00000546849 TNIP2Q8NFZ5 429 aa6.63□□□□□ -1.35
NPAS3-204ENST00000546849 ST8SIA4Q92187 359 aa6.63□□□□□ -1.35
NPAS3-204ENST00000546849 CNOT9Q92600 299 aaKnown RBP6.63□□□□□ -1.35
NPAS3-204ENST00000546849 KIF1BPQ96EK5 621 aa6.63□□□□□ -1.35
NPAS3-204ENST00000546849 ZNF419Q96HQ0 510 aaPredicted RBP6.63□□□□□ -1.35
NPAS3-204ENST00000546849 GATA5Q9BWX5 397 aaPredicted RBP6.63□□□□□ -1.35
NPAS3-204ENST00000546849 INTS2Q9H0H0 1204 aaKnown RBP6.63□□□□□ -1.35
NPAS3-204ENST00000546849 PAPOLBQ9NRJ5 636 aaKnown RBP6.63□□□□□ -1.35
NPAS3-204ENST00000546849 TMEM45AQ9NWC5 275 aa6.63□□□□□ -1.35
NPAS3-204ENST00000546849 EIF4G1Q04637 1599 aaKnown RBP6.62□□□□□ -1.35
NPAS3-204ENST00000546849 SMIM35A0A1B0GVV1 85 aa6.62□□□□□ -1.35
NPAS3-204ENST00000546849 RBMXL2O75526 392 aaKnown RBP6.62□□□□□ -1.35
NPAS3-204ENST00000546849 LCKP06239 509 aa6.62□□□□□ -1.35
NPAS3-204ENST00000546849 FCGR2AP12318 317 aa6.62□□□□□ -1.35
NPAS3-204ENST00000546849 RHAGQ02094 409 aa6.62□□□□□ -1.35
NPAS3-204ENST00000546849 PGM5Q15124 567 aa6.62□□□□□ -1.35
NPAS3-204ENST00000546849 EZH2Q15910 746 aaKnown RBP6.62□□□□□ -1.35
NPAS3-204ENST00000546849 EARS2Q5JPH6 523 aaKnown RBP6.62□□□□□ -1.35
NPAS3-204ENST00000546849 SYCE2Q6PIF2 218 aa6.62□□□□□ -1.35
NPAS3-204ENST00000546849 RSRC2Q7L4I2 434 aaKnown RBP6.62□□□□□ -1.35
NPAS3-204ENST00000546849 MAATS1Q7Z4T9 603 aa6.62□□□□□ -1.35
NPAS3-204ENST00000546849 DPP10Q8N608 796 aa6.62□□□□□ -1.35
NPAS3-204ENST00000546849 ZNF366Q8N895 744 aa6.62□□□□□ -1.35
NPAS3-204ENST00000546849 SCAIQ8N9R8 606 aa6.62□□□□□ -1.35
NPAS3-204ENST00000546849 DNAAF1Q8NEP3 725 aa6.62□□□□□ -1.35
NPAS3-204ENST00000546849 RNF125Q96EQ8 232 aa6.62□□□□□ -1.35
NPAS3-204ENST00000546849 RRP36Q96EU6 259 aaKnown RBP6.62□□□□□ -1.35
NPAS3-204ENST00000546849 CLMNQ96JQ2 1002 aa6.62□□□□□ -1.35
NPAS3-204ENST00000546849 Q9N2J8 555 aa6.62□□□□□ -1.35
NPAS3-204ENST00000546849 MLXIPLQ9NP71 852 aa6.62□□□□□ -1.35
NPAS3-204ENST00000546849 UTS2RQ9UKP6 389 aa6.62□□□□□ -1.35
NPAS3-204ENST00000546849 OSGIN2Q9Y236 505 aa6.62□□□□□ -1.35
NPAS3-204ENST00000546849 OR6C68A6NDL8 312 aa6.61□□□□□ -1.35
NPAS3-204ENST00000546849 PRPF4O43172 522 aaKnown RBP eCLIP6.61□□□□□ -1.35
NPAS3-204ENST00000546849 IL1AP01583 271 aa6.61□□□□□ -1.35
NPAS3-204ENST00000546849 ATP5F1P24539 256 aaPredicted RBP6.61□□□□□ -1.35
NPAS3-204ENST00000546849 GGT5P36269 586 aa6.61□□□□□ -1.35
NPAS3-204ENST00000546849 GJC1P36383 396 aa6.61□□□□□ -1.35
NPAS3-204ENST00000546849 CFHR1Q03591 330 aa6.61□□□□□ -1.35
NPAS3-204ENST00000546849 KIAA1755Q5JYT7 1200 aa6.61□□□□□ -1.35
NPAS3-204ENST00000546849 SH2D4BQ5SQS7 431 aa6.61□□□□□ -1.35
NPAS3-204ENST00000546849 TTC39AQ5SRH9 613 aa6.61□□□□□ -1.35
NPAS3-204ENST00000546849 FAAH2Q6GMR7 532 aa6.61□□□□□ -1.35
NPAS3-204ENST00000546849 GJB7Q6PEY0 223 aa6.61□□□□□ -1.35
NPAS3-204ENST00000546849 ANKRD13BQ86YJ7 626 aa6.61□□□□□ -1.35
NPAS3-204ENST00000546849 DDIASQ8IXT1 998 aa6.61□□□□□ -1.35
NPAS3-204ENST00000546849 TMEM217Q8N7C4 229 aa6.61□□□□□ -1.35
NPAS3-204ENST00000546849 TSPYL6Q8N831 410 aa6.61□□□□□ -1.35
NPAS3-204ENST00000546849 PCYOX1LQ8NBM8 494 aa6.61□□□□□ -1.35
NPAS3-204ENST00000546849 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.61□□□□□ -1.35
NPAS3-204ENST00000546849 HSPH1Q92598 858 aa6.61□□□□□ -1.35
NPAS3-204ENST00000546849 APOPT1Q96IL0 206 aa6.61□□□□□ -1.35
NPAS3-204ENST00000546849 EYA3Q99504 573 aa6.61□□□□□ -1.35
NPAS3-204ENST00000546849 QTRT1Q9BXR0 403 aaKnown RBP6.61□□□□□ -1.35
NPAS3-204ENST00000546849 AAMDCQ9H7C9 122 aa6.61□□□□□ -1.35
NPAS3-204ENST00000546849 ACTR5Q9H9F9 607 aaPredicted RBP6.61□□□□□ -1.35
NPAS3-204ENST00000546849 ENTPD7Q9NQZ7 604 aa6.61□□□□□ -1.35
NPAS3-204ENST00000546849 CNPY2Q9Y2B0 182 aa6.61□□□□□ -1.35
NPAS3-204ENST00000546849 TNPO2O14787 897 aaKnown RBP6.6□□□□□ -1.35
NPAS3-204ENST00000546849 KIF1CO43896 1103 aaKnown RBP6.6□□□□□ -1.35
NPAS3-204ENST00000546849 MBD4O95243 580 aa6.6□□□□□ -1.35
NPAS3-204ENST00000546849 LATS1O95835 1130 aa6.6□□□□□ -1.35
NPAS3-204ENST00000546849 KELP23276 732 aa6.6□□□□□ -1.35
NPAS3-204ENST00000546849 TUBP50607 506 aa6.6□□□□□ -1.35
NPAS3-204ENST00000546849 CDH15P55291 814 aa6.6□□□□□ -1.35
NPAS3-204ENST00000546849 CAMK1Q14012 370 aa6.6□□□□□ -1.35
NPAS3-204ENST00000546849 B4GALNT4Q76KP1 1039 aa6.6□□□□□ -1.35
NPAS3-204ENST00000546849 NEK8Q86SG6 692 aa6.6□□□□□ -1.35
NPAS3-204ENST00000546849 FAM185AQ8N0U4 392 aa6.6□□□□□ -1.35
NPAS3-204ENST00000546849 LSM14AQ8ND56 463 aaKnown RBP6.6□□□□□ -1.35
NPAS3-204ENST00000546849 ZUFSPQ96AP4 578 aa6.6□□□□□ -1.35
NPAS3-204ENST00000546849 TEFMQ96QE5 360 aaKnown RBP6.6□□□□□ -1.35
NPAS3-204ENST00000546849 FRG2BQ96QU4 278 aa6.6□□□□□ -1.35
NPAS3-204ENST00000546849 PAIP1Q9H074 479 aaKnown RBP6.6□□□□□ -1.35
NPAS3-204ENST00000546849 PDCL3Q9H2J4 239 aa6.6□□□□□ -1.35
NPAS3-204ENST00000546849 EPHX3Q9H6B9 360 aa6.6□□□□□ -1.35
NPAS3-204ENST00000546849 PREBQ9HCU5 417 aa6.6□□□□□ -1.35
NPAS3-204ENST00000546849 SMC4Q9NTJ3 1288 aa6.6□□□□□ -1.35
NPAS3-204ENST00000546849 IL1RAPL1Q9NZN1 696 aa6.6□□□□□ -1.35
NPAS3-204ENST00000546849 LAMP3Q9UQV4 416 aa6.6□□□□□ -1.35
NPAS3-204ENST00000546849 PER2O15055 1255 aa6.59□□□□□ -1.35
NPAS3-204ENST00000546849 BCAR3O75815 825 aa6.59□□□□□ -1.35
NPAS3-204ENST00000546849 CHRM4P08173 479 aa6.59□□□□□ -1.35
NPAS3-204ENST00000546849 ATP1A3P13637 1013 aa6.59□□□□□ -1.35
NPAS3-204ENST00000546849 MTNR1AP48039 350 aa6.59□□□□□ -1.35
NPAS3-204ENST00000546849 NANOS3P60323 173 aaKnown RBP6.59□□□□□ -1.35
NPAS3-204ENST00000546849 GAD2Q05329 585 aa6.59□□□□□ -1.35
NPAS3-204ENST00000546849 ZBTB16Q05516 673 aa6.59□□□□□ -1.35
NPAS3-204ENST00000546849 RALBP1Q15311 655 aa6.59□□□□□ -1.35
NPAS3-204ENST00000546849 SUPT20HL1Q3ZLR7 823 aa6.59□□□□□ -1.35
NPAS3-204ENST00000546849 SLC2A7Q6PXP3 512 aa6.59□□□□□ -1.35
NPAS3-204ENST00000546849 RRM2BQ7LG56 351 aa6.59□□□□□ -1.35
NPAS3-204ENST00000546849 ARMC8Q8IUR7 673 aa6.59□□□□□ -1.35
NPAS3-204ENST00000546849 EXD3Q8N9H8 876 aa6.59□□□□□ -1.35
NPAS3-204ENST00000546849 PPHLN1Q8NEY8 458 aaKnown RBP6.59□□□□□ -1.35
NPAS3-204ENST00000546849 ZCCHC10Q8TBK6 192 aa6.59□□□□□ -1.35
NPAS3-204ENST00000546849 FAR1Q8WVX9 515 aa6.59□□□□□ -1.35
NPAS3-204ENST00000546849 RUFY2Q8WXA3 655 aa6.59□□□□□ -1.35
NPAS3-204ENST00000546849 CENPIQ92674 756 aaPredicted RBP6.59□□□□□ -1.35
NPAS3-204ENST00000546849 SIGLEC11Q96RL6 698 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms