RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 NUMBLQ9Y6R0 609 aa6.62□□□□□ -1.35
SNHG1-225ENST00000545920 FAM170AA1A519 330 aa6.61□□□□□ -1.35
SNHG1-225ENST00000545920 RGSL1A5PLK6 1076 aa6.61□□□□□ -1.35
SNHG1-225ENST00000545920 ARHGAP42A6NI28 874 aa6.61□□□□□ -1.35
SNHG1-225ENST00000545920 TTLL8A6PVC2 850 aa6.61□□□□□ -1.35
SNHG1-225ENST00000545920 E5RJQ4 531 aa6.61□□□□□ -1.35
SNHG1-225ENST00000545920 H3BNX3 289 aa6.61□□□□□ -1.35
SNHG1-225ENST00000545920 EREGO14944 169 aa6.61□□□□□ -1.35
SNHG1-225ENST00000545920 CREB3O43889 395 aa6.61□□□□□ -1.35
SNHG1-225ENST00000545920 TADA2AO75478 443 aa6.61□□□□□ -1.35
SNHG1-225ENST00000545920 BAG2O95816 211 aa6.61□□□□□ -1.35
SNHG1-225ENST00000545920 GSRP00390 522 aa6.61□□□□□ -1.35
SNHG1-225ENST00000545920 ITGA2BP08514 1039 aa6.61□□□□□ -1.35
SNHG1-225ENST00000545920 CD48P09326 243 aa6.61□□□□□ -1.35
SNHG1-225ENST00000545920 STAG3L1P0CL83 205 aa6.61□□□□□ -1.35
SNHG1-225ENST00000545920 CSH1P0DML2 217 aa6.61□□□□□ -1.35
SNHG1-225ENST00000545920 CSH2P0DML3 217 aa6.61□□□□□ -1.35
SNHG1-225ENST00000545920 RALBP11234 206 aa6.61□□□□□ -1.35
SNHG1-225ENST00000545920 HARSP12081 509 aaKnown RBP6.61□□□□□ -1.35
SNHG1-225ENST00000545920 CHRNA5P30532 468 aa6.61□□□□□ -1.35
SNHG1-225ENST00000545920 DNAJA1P31689 397 aaKnown RBP6.61□□□□□ -1.35
SNHG1-225ENST00000545920 TCF7P36402 384 aaPredicted RBP6.61□□□□□ -1.35
SNHG1-225ENST00000545920 TNFSF9P41273 254 aa6.61□□□□□ -1.35
SNHG1-225ENST00000545920 PSMD8P48556 350 aa6.61□□□□□ -1.35
SNHG1-225ENST00000545920 HCAR3P49019 387 aa6.61□□□□□ -1.35
SNHG1-225ENST00000545920 KPNA2P52292 529 aaKnown RBP6.61□□□□□ -1.35
SNHG1-225ENST00000545920 ALDH18A1P54886 795 aaKnown RBP6.61□□□□□ -1.35
SNHG1-225ENST00000545920 MBTD1Q05BQ5 628 aa6.61□□□□□ -1.35
SNHG1-225ENST00000545920 CXCL9Q07325 125 aa6.61□□□□□ -1.35
SNHG1-225ENST00000545920 DPYSQ14117 519 aa6.61□□□□□ -1.35
SNHG1-225ENST00000545920 MAPRE2Q15555 327 aa6.61□□□□□ -1.35
SNHG1-225ENST00000545920 DCAF4L1Q3SXM0 396 aa6.61□□□□□ -1.35
SNHG1-225ENST00000545920 MMEL1Q495T6 779 aa6.61□□□□□ -1.35
SNHG1-225ENST00000545920 SPATS1Q496A3 300 aa6.61□□□□□ -1.35
SNHG1-225ENST00000545920 ARSJQ5FYB0 599 aaPredicted RBP6.61□□□□□ -1.35
SNHG1-225ENST00000545920 CFAP157Q5JU67 520 aa6.61□□□□□ -1.35
SNHG1-225ENST00000545920 N4BP2L1Q5TBK1 243 aaPredicted RBP6.61□□□□□ -1.35
SNHG1-225ENST00000545920 THEMIS2Q5TEJ8 643 aa6.61□□□□□ -1.35
SNHG1-225ENST00000545920 PDPK2PQ6A1A2 396 aa6.61□□□□□ -1.35
SNHG1-225ENST00000545920 C1orf228Q6PIY5 440 aa6.61□□□□□ -1.35
SNHG1-225ENST00000545920 EPGNQ6UW88 154 aa6.61□□□□□ -1.35
SNHG1-225ENST00000545920 FAM183BPQ6ZVS7 135 aa6.61□□□□□ -1.35
SNHG1-225ENST00000545920 ZNF534Q76KX8 674 aa6.61□□□□□ -1.35
SNHG1-225ENST00000545920 ARHGAP22Q7Z5H3 698 aa6.61□□□□□ -1.35
SNHG1-225ENST00000545920 NLRP8Q86W28 1048 aa6.61□□□□□ -1.35
SNHG1-225ENST00000545920 CCDC117Q8IWD4 279 aaPredicted RBP6.61□□□□□ -1.35
SNHG1-225ENST00000545920 KBTBD2Q8IY47 623 aa6.61□□□□□ -1.35
SNHG1-225ENST00000545920 ADGRF2Q8IZF7 708 aa6.61□□□□□ -1.35
SNHG1-225ENST00000545920 PQLC1Q8N2U9 271 aa6.61□□□□□ -1.35
SNHG1-225ENST00000545920 SVOPQ8N4V2 548 aa6.61□□□□□ -1.35
SNHG1-225ENST00000545920 AFAP1L2Q8N4X5 818 aa6.61□□□□□ -1.35
SNHG1-225ENST00000545920 EMC1Q8N766 993 aa6.61□□□□□ -1.35
SNHG1-225ENST00000545920 CNTD1Q8N815 330 aa6.61□□□□□ -1.35
SNHG1-225ENST00000545920 GOLM1Q8NBJ4 401 aa6.61□□□□□ -1.35
SNHG1-225ENST00000545920 C3orf58Q8NDZ4 430 aa6.61□□□□□ -1.35
SNHG1-225ENST00000545920 GABPB2Q8TAK5 448 aaPredicted RBP6.61□□□□□ -1.35
SNHG1-225ENST00000545920 CXorf38Q8TB03 319 aa6.61□□□□□ -1.35
SNHG1-225ENST00000545920 GDPD5Q8WTR4 605 aa6.61□□□□□ -1.35
SNHG1-225ENST00000545920 HTR3CQ8WXA8 447 aa6.61□□□□□ -1.35
SNHG1-225ENST00000545920 ACSF2Q96CM8 615 aaPredicted RBP6.61□□□□□ -1.35
SNHG1-225ENST00000545920 FAR2Q96K12 515 aa6.61□□□□□ -1.35
SNHG1-225ENST00000545920 TSNARE1Q96NA8 513 aa6.61□□□□□ -1.35
SNHG1-225ENST00000545920 PEBP4Q96S96 227 aa6.61□□□□□ -1.35
SNHG1-225ENST00000545920 SLC9A7Q96T83 725 aa6.61□□□□□ -1.35
SNHG1-225ENST00000545920 TTC1Q99614 292 aa6.61□□□□□ -1.35
SNHG1-225ENST00000545920 HAUS8Q9BT25 410 aa6.61□□□□□ -1.35
SNHG1-225ENST00000545920 C11orf84Q9BUA3 381 aaPredicted RBP6.61□□□□□ -1.35
SNHG1-225ENST00000545920 RSRP1Q9BUV0 290 aa6.61□□□□□ -1.35
SNHG1-225ENST00000545920 SNRNP25Q9BV90 132 aaKnown RBP6.61□□□□□ -1.35
SNHG1-225ENST00000545920 SLC13A1Q9BZW2 595 aa6.61□□□□□ -1.35
SNHG1-225ENST00000545920 CDH19Q9H159 772 aa6.61□□□□□ -1.35
SNHG1-225ENST00000545920 PLAC1Q9HBJ0 212 aa6.61□□□□□ -1.35
SNHG1-225ENST00000545920 ALG13Q9NP73 1137 aaKnown RBP6.61□□□□□ -1.35
SNHG1-225ENST00000545920 XPNPEP3Q9NQH7 507 aa6.61□□□□□ -1.35
SNHG1-225ENST00000545920 ABI2Q9NYB9 513 aaPredicted RBP6.61□□□□□ -1.35
SNHG1-225ENST00000545920 UTP6Q9NYH9 597 aaKnown RBP6.61□□□□□ -1.35
SNHG1-225ENST00000545920 RRN3Q9NYV6 651 aa6.61□□□□□ -1.35
SNHG1-225ENST00000545920 ARMCX1Q9P291 453 aa6.61□□□□□ -1.35
SNHG1-225ENST00000545920 TSPAN16Q9UKR8 245 aa6.61□□□□□ -1.35
SNHG1-225ENST00000545920 TRHDEQ9UKU6 1024 aa6.61□□□□□ -1.35
SNHG1-225ENST00000545920 SQORQ9Y6N5 450 aa6.61□□□□□ -1.35
SNHG1-225ENST00000545920 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.61□□□□□ -1.35
SNHG1-225ENST00000545920 LOC285556D6RIA3 1793 aa6.61□□□□□ -1.35
SNHG1-225ENST00000545920 SMCHD1A6NHR9 2005 aa6.6□□□□□ -1.35
SNHG1-225ENST00000545920 LTBP3Q9NS15 1303 aa6.6□□□□□ -1.35
SNHG1-225ENST00000545920 HMX2A2RU54 273 aa6.6□□□□□ -1.35
SNHG1-225ENST00000545920 FIGNL2A6NMB9 653 aa6.6□□□□□ -1.35
SNHG1-225ENST00000545920 CXorf49A8MYA2 514 aaPredicted RBP6.6□□□□□ -1.35
SNHG1-225ENST00000545920 NOP56O00567 594 aaKnown RBP6.6□□□□□ -1.35
SNHG1-225ENST00000545920 ZNF195O14628 629 aa6.6□□□□□ -1.35
SNHG1-225ENST00000545920 XPOTO43592 962 aaKnown RBP6.6□□□□□ -1.35
SNHG1-225ENST00000545920 TRIM13O60858 407 aa6.6□□□□□ -1.35
SNHG1-225ENST00000545920 CABYRO75952 493 aa6.6□□□□□ -1.35
SNHG1-225ENST00000545920 USP1O94782 785 aa6.6□□□□□ -1.35
SNHG1-225ENST00000545920 TMCC1O94876 653 aa6.6□□□□□ -1.35
SNHG1-225ENST00000545920 ARHGEF15O94989 841 aa6.6□□□□□ -1.35
SNHG1-225ENST00000545920 APBA3O96018 575 aa6.6□□□□□ -1.35
SNHG1-225ENST00000545920 ALDOAP04075 364 aaKnown RBP6.6□□□□□ -1.35
SNHG1-225ENST00000545920 EDN1P05305 212 aa6.6□□□□□ -1.35
SNHG1-225ENST00000545920 KRT19P08727 400 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms