RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 CD4P01730 458 aa16.11■□□□□ 0.17
LDLR-204ENST00000545707 JUNP05412 331 aaKnown RBP16.11■□□□□ 0.17
LDLR-204ENST00000545707 CHRM1P11229 460 aaPredicted RBP16.11■□□□□ 0.17
LDLR-204ENST00000545707 CYP2C9P11712 490 aa16.11■□□□□ 0.17
LDLR-204ENST00000545707 MYL4P12829 197 aa16.11■□□□□ 0.17
LDLR-204ENST00000545707 NUDT2P50583 147 aa16.11■□□□□ 0.17
LDLR-204ENST00000545707 ZNF460Q14592 562 aa16.11■□□□□ 0.17
LDLR-204ENST00000545707 GRAMD1BQ3KR37 738 aa16.11■□□□□ 0.17
LDLR-204ENST00000545707 CWF19L1Q69YN2 538 aaKnown RBP16.11■□□□□ 0.17
LDLR-204ENST00000545707 ADGRG6Q86SQ4 1221 aa16.11■□□□□ 0.17
LDLR-204ENST00000545707 CLEC14AQ86T13 490 aa16.11■□□□□ 0.17
LDLR-204ENST00000545707 APLFQ8IW19 511 aaPredicted RBP16.11■□□□□ 0.17
LDLR-204ENST00000545707 GALNT15Q8N3T1 639 aa16.11■□□□□ 0.17
LDLR-204ENST00000545707 GPRC5AQ8NFJ5 357 aa16.11■□□□□ 0.17
LDLR-204ENST00000545707 LENG1Q96BZ8 264 aaPredicted RBP16.11■□□□□ 0.17
LDLR-204ENST00000545707 VPS39Q96JC1 886 aa16.11■□□□□ 0.17
LDLR-204ENST00000545707 APBA2Q99767 749 aa16.11■□□□□ 0.17
LDLR-204ENST00000545707 NUF2Q9BZD4 464 aa16.11■□□□□ 0.17
LDLR-204ENST00000545707 WDR6Q9NNW5 1121 aaKnown RBP16.11■□□□□ 0.17
LDLR-204ENST00000545707 CASS4Q9NQ75 786 aa16.11■□□□□ 0.17
LDLR-204ENST00000545707 ZSWIM8A7E2V4 1837 aa16.11■□□□□ 0.17
LDLR-204ENST00000545707 JCHAINP01591 159 aa16.1■□□□□ 0.17
LDLR-204ENST00000545707 USP17L7P0C7H9 530 aa16.1■□□□□ 0.17
LDLR-204ENST00000545707 NCAM1P13591 858 aa16.1■□□□□ 0.17
LDLR-204ENST00000545707 CYP2B6P20813 491 aa16.1■□□□□ 0.17
LDLR-204ENST00000545707 CDK7P50613 346 aa16.1■□□□□ 0.17
LDLR-204ENST00000545707 MTTPP55157 894 aa16.1■□□□□ 0.17
LDLR-204ENST00000545707 PRAMEF19Q5SWL8 479 aa16.1■□□□□ 0.17
LDLR-204ENST00000545707 RASIP1Q5U651 963 aa16.1■□□□□ 0.17
LDLR-204ENST00000545707 OTOP3Q7RTS5 596 aa16.1■□□□□ 0.17
LDLR-204ENST00000545707 BNIPLQ7Z465 357 aa16.1■□□□□ 0.17
LDLR-204ENST00000545707 SNX32Q86XE0 403 aa16.1■□□□□ 0.17
LDLR-204ENST00000545707 EMID1Q96A84 441 aaPredicted RBP16.1■□□□□ 0.17
LDLR-204ENST00000545707 ZNF560Q96MR9 790 aa16.1■□□□□ 0.17
LDLR-204ENST00000545707 ZCWPW1Q9H0M4 648 aa16.1■□□□□ 0.17
LDLR-204ENST00000545707 DDIT4Q9NX09 232 aa16.1■□□□□ 0.17
LDLR-204ENST00000545707 CAPN8A6NHC0 703 aa16.1■□□□□ 0.17
LDLR-204ENST00000545707 MEIS3P2A8K0S8 358 aa16.1■□□□□ 0.17
LDLR-204ENST00000545707 CFLARO15519 480 aa16.1■□□□□ 0.17
LDLR-204ENST00000545707 DYNC1LI2O43237 492 aaPredicted RBP16.1■□□□□ 0.17
LDLR-204ENST00000545707 SBK3P0C264 359 aa16.1■□□□□ 0.17
LDLR-204ENST00000545707 ETS2P15036 469 aa16.1■□□□□ 0.17
LDLR-204ENST00000545707 VCLP18206 1134 aa16.1■□□□□ 0.17
LDLR-204ENST00000545707 GRIA4P48058 902 aa16.1■□□□□ 0.17
LDLR-204ENST00000545707 NAGLUP54802 743 aa16.1■□□□□ 0.17
LDLR-204ENST00000545707 HNRNPDQ14103 355 aaKnown RBP16.1■□□□□ 0.17
LDLR-204ENST00000545707 DGKDQ16760 1214 aa16.1■□□□□ 0.17
LDLR-204ENST00000545707 LSM12Q3MHD2 195 aaKnown RBP16.1■□□□□ 0.17
LDLR-204ENST00000545707 FSCBQ5H9T9 825 aa16.1■□□□□ 0.17
LDLR-204ENST00000545707 KCTD11Q693B1 232 aa16.1■□□□□ 0.17
LDLR-204ENST00000545707 PAXIP1Q6ZW49 1069 aaPredicted RBP16.1■□□□□ 0.17
LDLR-204ENST00000545707 ISL2Q96A47 359 aa16.1■□□□□ 0.17
LDLR-204ENST00000545707 TRAPPC9Q96Q05 1148 aa16.1■□□□□ 0.17
LDLR-204ENST00000545707 GCNAQ96QF7 691 aa16.1■□□□□ 0.17
LDLR-204ENST00000545707 ACE2Q9BYF1 805 aaPredicted RBP16.1■□□□□ 0.17
LDLR-204ENST00000545707 RHOBTB2Q9BYZ6 727 aa16.1■□□□□ 0.17
LDLR-204ENST00000545707 FAM96AQ9H5X1 160 aa16.1■□□□□ 0.17
LDLR-204ENST00000545707 ADAM28Q9UKQ2 775 aa16.1■□□□□ 0.17
LDLR-204ENST00000545707 NUP205Q92621 2012 aa16.1■□□□□ 0.17
LDLR-204ENST00000545707 RBM47A0AV96 593 aaKnown RBP16.09■□□□□ 0.17
LDLR-204ENST00000545707 PIGNO95427 931 aa16.09■□□□□ 0.17
LDLR-204ENST00000545707 SMIM10L2AP0DMW4 78 aa16.09■□□□□ 0.17
LDLR-204ENST00000545707 SMIM10L2BP0DMW5 78 aa16.09■□□□□ 0.17
LDLR-204ENST00000545707 GLDCP23378 1020 aa16.09■□□□□ 0.17
LDLR-204ENST00000545707 PIK3R1P27986 724 aa16.09■□□□□ 0.17
LDLR-204ENST00000545707 GRIA2P42262 883 aa16.09■□□□□ 0.17
LDLR-204ENST00000545707 PKNOX1P55347 436 aa16.09■□□□□ 0.17
LDLR-204ENST00000545707 CCNA1P78396 465 aa16.09■□□□□ 0.17
LDLR-204ENST00000545707 MED21Q13503 144 aa16.09■□□□□ 0.17
LDLR-204ENST00000545707 ARL13AQ5H913 290 aaPredicted RBP16.09■□□□□ 0.17
LDLR-204ENST00000545707 FBXL19Q6PCT2 694 aa16.09■□□□□ 0.17
LDLR-204ENST00000545707 DPP9Q86TI2 863 aa16.09■□□□□ 0.17
LDLR-204ENST00000545707 KBTBD6Q86V97 674 aa16.09■□□□□ 0.17
LDLR-204ENST00000545707 SPATA22Q8NHS9 363 aa16.09■□□□□ 0.17
LDLR-204ENST00000545707 USP13Q92995 863 aaPredicted RBP16.09■□□□□ 0.17
LDLR-204ENST00000545707 SCYL1Q96KG9 808 aa16.09■□□□□ 0.17
LDLR-204ENST00000545707 SLC2A13Q96QE2 648 aa16.09■□□□□ 0.17
LDLR-204ENST00000545707 SH3GL3Q99963 347 aa16.09■□□□□ 0.17
LDLR-204ENST00000545707 TRIM4Q9C037 500 aa16.09■□□□□ 0.17
LDLR-204ENST00000545707 ILKAPQ9H0C8 392 aaPredicted RBP16.09■□□□□ 0.17
LDLR-204ENST00000545707 OXSMQ9NWU1 459 aa16.09■□□□□ 0.17
LDLR-204ENST00000545707 ZDHHC2Q9UIJ5 367 aa16.09■□□□□ 0.17
LDLR-204ENST00000545707 INPP5FQ9Y2H2 1132 aa16.09■□□□□ 0.17
LDLR-204ENST00000545707 MPOP05164 745 aa16.09■□□□□ 0.17
LDLR-204ENST00000545707 UQCRBP14927 111 aa16.09■□□□□ 0.17
LDLR-204ENST00000545707 AFF1P51825 1210 aaKnown RBP16.09■□□□□ 0.17
LDLR-204ENST00000545707 SATB1Q01826 763 aa16.09■□□□□ 0.17
LDLR-204ENST00000545707 ROR2Q01974 943 aaKnown RBP16.09■□□□□ 0.17
LDLR-204ENST00000545707 MMEL1Q495T6 779 aa16.09■□□□□ 0.17
LDLR-204ENST00000545707 SV2CQ496J9 727 aa16.09■□□□□ 0.17
LDLR-204ENST00000545707 UBXN11Q5T124 520 aa16.09■□□□□ 0.17
LDLR-204ENST00000545707 NXNQ6DKJ4 435 aa16.09■□□□□ 0.17
LDLR-204ENST00000545707 ACAD11Q709F0 780 aa16.09■□□□□ 0.17
LDLR-204ENST00000545707 TMEM151AQ8N4L1 468 aa16.09■□□□□ 0.17
LDLR-204ENST00000545707 KCTD4Q8WVF5 259 aa16.09■□□□□ 0.17
LDLR-204ENST00000545707 NRCAMQ92823 1304 aa16.09■□□□□ 0.17
LDLR-204ENST00000545707 CATSPER2Q96P56 530 aa16.09■□□□□ 0.17
LDLR-204ENST00000545707 CDRT15Q96T59 188 aa16.09■□□□□ 0.17
LDLR-204ENST00000545707 OMDQ99983 421 aa16.09■□□□□ 0.17
LDLR-204ENST00000545707 RTKNQ9BST9 563 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms