RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 HOXB9P17482 250 aaPredicted RBP5.13□□□□□ -1.59
SNHG1-224ENST00000545688 PMS2P54278 862 aa5.13□□□□□ -1.59
SNHG1-224ENST00000545688 ZP1P60852 638 aa5.13□□□□□ -1.59
SNHG1-224ENST00000545688 PLK5Q496M5 336 aa5.13□□□□□ -1.59
SNHG1-224ENST00000545688 DNTTIP2Q5QJE6 756 aaKnown RBP5.13□□□□□ -1.59
SNHG1-224ENST00000545688 ATPAF1Q5TC12 328 aaPredicted RBP5.13□□□□□ -1.59
SNHG1-224ENST00000545688 VWA5B1Q5TIE3 1220 aa5.13□□□□□ -1.59
SNHG1-224ENST00000545688 FAM171A1Q5VUB5 890 aa5.13□□□□□ -1.59
SNHG1-224ENST00000545688 TMEM71Q6P5X7 295 aa5.13□□□□□ -1.59
SNHG1-224ENST00000545688 ZNF527Q8NB42 609 aa5.13□□□□□ -1.59
SNHG1-224ENST00000545688 CLEC18CQ8NCF0 446 aa5.13□□□□□ -1.59
SNHG1-224ENST00000545688 ADAMTS14Q8WXS8 1223 aa5.13□□□□□ -1.59
SNHG1-224ENST00000545688 EID2BQ96D98 161 aa5.13□□□□□ -1.59
SNHG1-224ENST00000545688 LMLNQ96KR4 655 aa5.13□□□□□ -1.59
SNHG1-224ENST00000545688 KATNAL1Q9BW62 490 aa5.13□□□□□ -1.59
SNHG1-224ENST00000545688 CATSPERBQ9H7T0 1116 aa5.13□□□□□ -1.59
SNHG1-224ENST00000545688 SLC25A13Q9UJS0 675 aa5.13□□□□□ -1.59
SNHG1-224ENST00000545688 DAPP1Q9UN19 280 aa5.13□□□□□ -1.59
SNHG1-224ENST00000545688 EFCAB8A8MWE9 144 aa5.12□□□□□ -1.59
SNHG1-224ENST00000545688 ACTL6BO94805 426 aa5.12□□□□□ -1.59
SNHG1-224ENST00000545688 PKMP14618 531 aaKnown RBP5.12□□□□□ -1.59
SNHG1-224ENST00000545688 TYK2P29597 1187 aa5.12□□□□□ -1.59
SNHG1-224ENST00000545688 PCP4P48539 62 aa5.12□□□□□ -1.59
SNHG1-224ENST00000545688 CDK7P50613 346 aa5.12□□□□□ -1.59
SNHG1-224ENST00000545688 CDK18Q07002 472 aa5.12□□□□□ -1.59
SNHG1-224ENST00000545688 PKP1Q13835 747 aa5.12□□□□□ -1.59
SNHG1-224ENST00000545688 TBRG1Q3YBR2 411 aa5.12□□□□□ -1.59
SNHG1-224ENST00000545688 PRAMEF19Q5SWL8 479 aa5.12□□□□□ -1.59
SNHG1-224ENST00000545688 NFRKBQ6P4R8 1299 aa5.12□□□□□ -1.59
SNHG1-224ENST00000545688 FAM83HQ6ZRV2 1179 aaPredicted RBP5.12□□□□□ -1.59
SNHG1-224ENST00000545688 RNF144BQ7Z419 303 aa5.12□□□□□ -1.59
SNHG1-224ENST00000545688 SLC2A12Q8TD20 617 aa5.12□□□□□ -1.59
SNHG1-224ENST00000545688 APOLD1Q96LR9 279 aa5.12□□□□□ -1.59
SNHG1-224ENST00000545688 BRD8Q9H0E9 1235 aa5.12□□□□□ -1.59
SNHG1-224ENST00000545688 ELAC1Q9H777 363 aaKnown RBP5.12□□□□□ -1.59
SNHG1-224ENST00000545688 TMEM248Q9NWD8 314 aa5.12□□□□□ -1.59
SNHG1-224ENST00000545688 ZDHHC7Q9NXF8 308 aa5.12□□□□□ -1.59
SNHG1-224ENST00000545688 PLEKHB1Q9UF11 243 aaPredicted RBP5.12□□□□□ -1.59
SNHG1-224ENST00000545688 RCE1Q9Y256 329 aa5.12□□□□□ -1.59
SNHG1-224ENST00000545688 RAP2CQ9Y3L5 183 aa5.12□□□□□ -1.59
SNHG1-224ENST00000545688 SCN5AQ14524 2016 aa5.12□□□□□ -1.59
SNHG1-224ENST00000545688 A0A087WV62 115 aa5.11□□□□□ -1.59
SNHG1-224ENST00000545688 IFITM10A6NMD0 228 aa5.11□□□□□ -1.59
SNHG1-224ENST00000545688 LIASO43766 372 aa5.11□□□□□ -1.59
SNHG1-224ENST00000545688 ITGA2BP08514 1039 aa5.11□□□□□ -1.59
SNHG1-224ENST00000545688 PNLIPRP1P54315 467 aa5.11□□□□□ -1.59
SNHG1-224ENST00000545688 OAZ1P54368 228 aa5.11□□□□□ -1.59
SNHG1-224ENST00000545688 GALNT1Q10472 559 aaPredicted RBP5.11□□□□□ -1.59
SNHG1-224ENST00000545688 PFKFB4Q16877 469 aa5.11□□□□□ -1.59
SNHG1-224ENST00000545688 GALNTL6Q49A17 601 aa5.11□□□□□ -1.59
SNHG1-224ENST00000545688 C5orf22Q49AR2 442 aa5.11□□□□□ -1.59
SNHG1-224ENST00000545688 TTC22Q5TAA0 569 aa5.11□□□□□ -1.59
SNHG1-224ENST00000545688 CCSAPQ6IQ19 270 aaPredicted RBP5.11□□□□□ -1.59
SNHG1-224ENST00000545688 MTFR2Q6P444 385 aa5.11□□□□□ -1.59
SNHG1-224ENST00000545688 Q6ZTC4 211 aa5.11□□□□□ -1.59
SNHG1-224ENST00000545688 RAB11FIP2Q7L804 512 aa5.11□□□□□ -1.59
SNHG1-224ENST00000545688 ZNF367Q7RTV3 350 aa5.11□□□□□ -1.59
SNHG1-224ENST00000545688 SLC44A2Q8IWA5 706 aaPredicted RBP5.11□□□□□ -1.59
SNHG1-224ENST00000545688 VPS52Q8N1B4 723 aa5.11□□□□□ -1.59
SNHG1-224ENST00000545688 HORMAD2Q8N7B1 307 aa5.11□□□□□ -1.59
SNHG1-224ENST00000545688 SCAMP5Q8TAC9 235 aa5.11□□□□□ -1.59
SNHG1-224ENST00000545688 BICD2Q8TD16 824 aa5.11□□□□□ -1.59
SNHG1-224ENST00000545688 KLHL31Q9H511 634 aa5.11□□□□□ -1.59
SNHG1-224ENST00000545688 SLC22A11Q9NSA0 550 aa5.11□□□□□ -1.59
SNHG1-224ENST00000545688 NPIPB13A6NJU9 1138 aa5.1□□□□□ -1.59
SNHG1-224ENST00000545688 SAC3D1A6NKF1 404 aa5.1□□□□□ -1.59
SNHG1-224ENST00000545688 NPIPB5A8MRT5 1133 aa5.1□□□□□ -1.59
SNHG1-224ENST00000545688 NPIPB4C9JG80 1138 aa5.1□□□□□ -1.59
SNHG1-224ENST00000545688 MS4A18H0YCH9 400 aa5.1□□□□□ -1.59
SNHG1-224ENST00000545688 CYP21A2P08686 494 aa5.1□□□□□ -1.59
SNHG1-224ENST00000545688 LYL1P12980 280 aa5.1□□□□□ -1.59
SNHG1-224ENST00000545688 UNGP13051 313 aaPredicted RBP5.1□□□□□ -1.59
SNHG1-224ENST00000545688 SERPINB3P29508 390 aa5.1□□□□□ -1.59
SNHG1-224ENST00000545688 PDIA3P30101 505 aaKnown RBP5.1□□□□□ -1.59
SNHG1-224ENST00000545688 AVPR1AP37288 418 aa5.1□□□□□ -1.59
SNHG1-224ENST00000545688 PPP3CCP48454 512 aa5.1□□□□□ -1.59
SNHG1-224ENST00000545688 RPS6KA2Q15349 733 aa5.1□□□□□ -1.59
SNHG1-224ENST00000545688 SHBQ15464 509 aa5.1□□□□□ -1.59
SNHG1-224ENST00000545688 FSCBQ5H9T9 825 aa5.1□□□□□ -1.59
SNHG1-224ENST00000545688 LIN54Q6MZP7 749 aa5.1□□□□□ -1.59
SNHG1-224ENST00000545688 LMO3Q8TAP4 145 aa5.1□□□□□ -1.59
SNHG1-224ENST00000545688 KCNJ9Q92806 393 aa5.1□□□□□ -1.59
SNHG1-224ENST00000545688 TM6SF1Q9BZW5 370 aa5.1□□□□□ -1.59
SNHG1-224ENST00000545688 TRIM31Q9BZY9 425 aa5.1□□□□□ -1.59
SNHG1-224ENST00000545688 PRDM8Q9NQV8 689 aa5.1□□□□□ -1.59
SNHG1-224ENST00000545688 CHST12Q9NRB3 414 aa5.1□□□□□ -1.59
SNHG1-224ENST00000545688 HERC5Q9UII4 1024 aaKnown RBP5.1□□□□□ -1.59
SNHG1-224ENST00000545688 C19orf53Q9UNZ5 99 aaPredicted RBP5.1□□□□□ -1.59
SNHG1-224ENST00000545688 SYT5O00445 386 aa5.09□□□□□ -1.59
SNHG1-224ENST00000545688 TMCC1O94876 653 aa5.09□□□□□ -1.59
SNHG1-224ENST00000545688 GSTM2P28161 218 aa5.09□□□□□ -1.59
SNHG1-224ENST00000545688 PDLIM4P50479 330 aa5.09□□□□□ -1.59
SNHG1-224ENST00000545688 RRP1P56182 461 aaKnown RBP5.09□□□□□ -1.59
SNHG1-224ENST00000545688 AP2B1P63010 937 aa5.09□□□□□ -1.59
SNHG1-224ENST00000545688 ALKBH1Q13686 389 aaKnown RBP5.09□□□□□ -1.59
SNHG1-224ENST00000545688 HNF4GQ14541 408 aa5.09□□□□□ -1.59
SNHG1-224ENST00000545688 ZACNQ401N2 412 aa5.09□□□□□ -1.59
SNHG1-224ENST00000545688 GXYLT1Q4G148 440 aa5.09□□□□□ -1.59
SNHG1-224ENST00000545688 PGBD2Q6P3X8 592 aa5.09□□□□□ -1.59
SNHG1-224ENST00000545688 KLHL17Q6TDP4 642 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms