RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 Q6ZVU0 165 aa9.67□□□□□ -0.86
CHD4-212ENST00000545083 ABI3BPQ7Z7G0 1075 aa9.67□□□□□ -0.86
CHD4-212ENST00000545083 CIR1Q86X95 450 aaPredicted RBP9.67□□□□□ -0.86
CHD4-212ENST00000545083 LGI2Q8N0V4 545 aa9.67□□□□□ -0.86
CHD4-212ENST00000545083 ARL14Q8N4G2 192 aa9.67□□□□□ -0.86
CHD4-212ENST00000545083 WDR36Q8NI36 951 aaKnown RBP9.67□□□□□ -0.86
CHD4-212ENST00000545083 DQX1Q8TE96 717 aaKnown RBP9.67□□□□□ -0.86
CHD4-212ENST00000545083 OR8D1Q8WZ84 308 aa9.67□□□□□ -0.86
CHD4-212ENST00000545083 GRAMD1AQ96CP6 724 aa9.67□□□□□ -0.86
CHD4-212ENST00000545083 IFT43Q96FT9 208 aa9.67□□□□□ -0.86
CHD4-212ENST00000545083 EEF2KMTQ96G04 330 aa9.67□□□□□ -0.86
CHD4-212ENST00000545083 BMFQ96LC9 184 aa9.67□□□□□ -0.86
CHD4-212ENST00000545083 ARHGAP9Q9BRR9 750 aa9.67□□□□□ -0.86
CHD4-212ENST00000545083 DUSP23Q9BVJ7 150 aa9.67□□□□□ -0.86
CHD4-212ENST00000545083 DNAI2Q9GZS0 605 aa9.67□□□□□ -0.86
CHD4-212ENST00000545083 MAGEF1Q9HAY2 307 aa9.67□□□□□ -0.86
CHD4-212ENST00000545083 TMEM8AQ9HCN3 771 aa9.67□□□□□ -0.86
CHD4-212ENST00000545083 PREBQ9HCU5 417 aa9.67□□□□□ -0.86
CHD4-212ENST00000545083 GPR27Q9NS67 375 aa9.67□□□□□ -0.86
CHD4-212ENST00000545083 DNAJC28Q9NX36 388 aa9.67□□□□□ -0.86
CHD4-212ENST00000545083 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.67□□□□□ -0.86
CHD4-212ENST00000545083 DACH1Q9UI36 760 aa9.67□□□□□ -0.86
CHD4-212ENST00000545083 KLF15Q9UIH9 416 aa9.67□□□□□ -0.86
CHD4-212ENST00000545083 ZFR2Q9UPR6 939 aaKnown RBP9.67□□□□□ -0.86
CHD4-212ENST00000545083 FRMD4BQ9Y2L6 1034 aa9.67□□□□□ -0.86
CHD4-212ENST00000545083 CCDC187A0A096LP49 1063 aa9.66□□□□□ -0.86
CHD4-212ENST00000545083 O00370 1275 aa9.66□□□□□ -0.86
CHD4-212ENST00000545083 MUSKO15146 869 aa9.66□□□□□ -0.86
CHD4-212ENST00000545083 CUTAO60888 179 aa9.66□□□□□ -0.86
CHD4-212ENST00000545083 ITGB2P05107 769 aa9.66□□□□□ -0.86
CHD4-212ENST00000545083 CTSLP07711 333 aa9.66□□□□□ -0.86
CHD4-212ENST00000545083 SETSIPP0DME0 302 aa9.66□□□□□ -0.86
CHD4-212ENST00000545083 CD19P15391 556 aa9.66□□□□□ -0.86
CHD4-212ENST00000545083 WT1P19544 449 aaPredicted RBP9.66□□□□□ -0.86
CHD4-212ENST00000545083 PDCP20941 246 aa9.66□□□□□ -0.86
CHD4-212ENST00000545083 HNRNPA2B1P22626 353 aaKnown RBP9.66□□□□□ -0.86
CHD4-212ENST00000545083 NR2F2P24468 414 aa9.66□□□□□ -0.86
CHD4-212ENST00000545083 SLC5A2P31639 672 aa9.66□□□□□ -0.86
CHD4-212ENST00000545083 AKT2P31751 481 aa9.66□□□□□ -0.86
CHD4-212ENST00000545083 NNMTP40261 264 aa9.66□□□□□ -0.86
CHD4-212ENST00000545083 MLLT3P42568 568 aaPredicted RBP9.66□□□□□ -0.86
CHD4-212ENST00000545083 HNRNPKP61978 463 aaKnown RBP eCLIP9.66□□□□□ -0.86
CHD4-212ENST00000545083 UBAP2LQ14157 1087 aaKnown RBP9.66□□□□□ -0.86
CHD4-212ENST00000545083 DEFB133Q30KQ1 61 aa9.66□□□□□ -0.86
CHD4-212ENST00000545083 TPRG1LQ5T0D9 272 aa9.66□□□□□ -0.86
CHD4-212ENST00000545083 FAM46CQ5VWP2 391 aa9.66□□□□□ -0.86
CHD4-212ENST00000545083 RAP1GAP2Q684P5 730 aa9.66□□□□□ -0.86
CHD4-212ENST00000545083 SEL1L3Q68CR1 1132 aa9.66□□□□□ -0.86
CHD4-212ENST00000545083 KRT39Q6A163 491 aa9.66□□□□□ -0.86
CHD4-212ENST00000545083 CXorf57Q6NSI4 855 aaKnown RBP9.66□□□□□ -0.86
CHD4-212ENST00000545083 XKR5Q6UX68 686 aa9.66□□□□□ -0.86
CHD4-212ENST00000545083 Q6ZSR6 202 aa9.66□□□□□ -0.86
CHD4-212ENST00000545083 USP53Q70EK8 1073 aa9.66□□□□□ -0.86
CHD4-212ENST00000545083 INTS8Q75QN2 995 aaKnown RBP9.66□□□□□ -0.86
CHD4-212ENST00000545083 DSG4Q86SJ6 1040 aa9.66□□□□□ -0.86
CHD4-212ENST00000545083 HORMAD1Q86X24 394 aa9.66□□□□□ -0.86
CHD4-212ENST00000545083 CCDC117Q8IWD4 279 aaPredicted RBP9.66□□□□□ -0.86
CHD4-212ENST00000545083 TTC39CQ8N584 583 aa9.66□□□□□ -0.86
CHD4-212ENST00000545083 CCDC150Q8NCX0 1101 aa9.66□□□□□ -0.86
CHD4-212ENST00000545083 OR52K2Q8NGK3 314 aa9.66□□□□□ -0.86
CHD4-212ENST00000545083 SGF29Q96ES7 293 aa9.66□□□□□ -0.86
CHD4-212ENST00000545083 ALG14Q96F25 216 aa9.66□□□□□ -0.86
CHD4-212ENST00000545083 FAXDC2Q96IV6 333 aa9.66□□□□□ -0.86
CHD4-212ENST00000545083 DDX50Q9BQ39 737 aaKnown RBP9.66□□□□□ -0.86
CHD4-212ENST00000545083 EXOC1Q9NV70 894 aa9.66□□□□□ -0.86
CHD4-212ENST00000545083 EVA1BQ9NVM1 165 aa9.66□□□□□ -0.86
CHD4-212ENST00000545083 HESX1Q9UBX0 185 aa9.66□□□□□ -0.86
CHD4-212ENST00000545083 TRAF3IP3Q9Y228 551 aa9.66□□□□□ -0.86
CHD4-212ENST00000545083 SPTBN1Q01082 2364 aaKnown RBP9.66□□□□□ -0.86
CHD4-212ENST00000545083 POM121BA6NF01 834 aa9.65□□□□□ -0.86
CHD4-212ENST00000545083 C1QTNF3-AMACRE9PGA6 284 aa9.65□□□□□ -0.86
CHD4-212ENST00000545083 MCF2LO15068 1137 aa9.65□□□□□ -0.86
CHD4-212ENST00000545083 RAD51BO15315 384 aa9.65□□□□□ -0.86
CHD4-212ENST00000545083 ATP9BO43861 1147 aa9.65□□□□□ -0.86
CHD4-212ENST00000545083 BNIP3LO60238 219 aa9.65□□□□□ -0.86
CHD4-212ENST00000545083 TCEA3O75764 348 aa9.65□□□□□ -0.86
CHD4-212ENST00000545083 GJB6O95452 261 aa9.65□□□□□ -0.86
CHD4-212ENST00000545083 CSF2P04141 144 aa9.65□□□□□ -0.86
CHD4-212ENST00000545083 NME1P15531 152 aaKnown RBP9.65□□□□□ -0.86
CHD4-212ENST00000545083 CR2P20023 1033 aa9.65□□□□□ -0.86
CHD4-212ENST00000545083 TACR2P21452 398 aa9.65□□□□□ -0.86
CHD4-212ENST00000545083 PLK1P53350 603 aa9.65□□□□□ -0.86
CHD4-212ENST00000545083 FGL2Q14314 439 aa9.65□□□□□ -0.86
CHD4-212ENST00000545083 DLG2Q15700 870 aa9.65□□□□□ -0.86
CHD4-212ENST00000545083 TBR1Q16650 682 aa9.65□□□□□ -0.86
CHD4-212ENST00000545083 ACCSLQ4AC99 568 aa9.65□□□□□ -0.86
CHD4-212ENST00000545083 NEK5Q6P3R8 708 aa9.65□□□□□ -0.86
CHD4-212ENST00000545083 PTAR1Q7Z6K3 402 aaPredicted RBP9.65□□□□□ -0.86
CHD4-212ENST00000545083 B3GNT8Q7Z7M8 397 aa9.65□□□□□ -0.86
CHD4-212ENST00000545083 TAC4Q86UU9 113 aa9.65□□□□□ -0.86
CHD4-212ENST00000545083 CHSY1Q86X52 802 aa9.65□□□□□ -0.86
CHD4-212ENST00000545083 SLC35F3Q8IY50 421 aa9.65□□□□□ -0.86
CHD4-212ENST00000545083 FAM186BQ8IYM0 893 aa9.65□□□□□ -0.86
CHD4-212ENST00000545083 CCAR2Q8N163 923 aaKnown RBP9.65□□□□□ -0.86
CHD4-212ENST00000545083 UBR7Q8N806 425 aa9.65□□□□□ -0.86
CHD4-212ENST00000545083 FBXL13Q8NEE6 735 aa9.65□□□□□ -0.86
CHD4-212ENST00000545083 TPCN2Q8NHX9 752 aa9.65□□□□□ -0.86
CHD4-212ENST00000545083 SLC35F5Q8WV83 523 aa9.65□□□□□ -0.86
CHD4-212ENST00000545083 HTR3CQ8WXA8 447 aa9.65□□□□□ -0.86
CHD4-212ENST00000545083 IRGQQ8WZA9 623 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms