RNA–Protein interactions for RNA: ENST00000544909.5

PAAF1-215, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-215ENST00000544909 PRKD2Q9BZL6 878 aa12.7□□□□□ -0.38
PAAF1-215ENST00000544909 CDH19Q9H159 772 aa12.7□□□□□ -0.38
PAAF1-215ENST00000544909 CATSPERBQ9H7T0 1116 aa12.7□□□□□ -0.38
PAAF1-215ENST00000544909 NMRAL1Q9HBL8 299 aa12.7□□□□□ -0.38
PAAF1-215ENST00000544909 OXSMQ9NWU1 459 aa12.7□□□□□ -0.38
PAAF1-215ENST00000544909 NDE1Q9NXR1 346 aa12.7□□□□□ -0.38
PAAF1-215ENST00000544909 HACD3Q9P035 362 aa12.7□□□□□ -0.38
PAAF1-215ENST00000544909 VTI1BQ9UEU0 232 aa12.7□□□□□ -0.38
PAAF1-215ENST00000544909 MARCOQ9UEW3 520 aaPredicted RBP12.7□□□□□ -0.38
PAAF1-215ENST00000544909 C2orf71A6NGG8 1288 aa12.69□□□□□ -0.38
PAAF1-215ENST00000544909 FAM72CH0Y354 149 aa12.69□□□□□ -0.38
PAAF1-215ENST00000544909 ZBTB24O43167 697 aaPredicted RBP12.69□□□□□ -0.38
PAAF1-215ENST00000544909 KRT36O76013 467 aa12.69□□□□□ -0.38
PAAF1-215ENST00000544909 LRIG2O94898 1065 aa12.69□□□□□ -0.38
PAAF1-215ENST00000544909 AKR1A1P14550 325 aa12.69□□□□□ -0.38
PAAF1-215ENST00000544909 YBX3P16989 372 aaKnown RBP eCLIP12.69□□□□□ -0.382e-8■□□□□ 8.8
PAAF1-215ENST00000544909 KCNA4P22459 653 aa12.69□□□□□ -0.38
PAAF1-215ENST00000544909 MLH1P40692 756 aa12.69□□□□□ -0.38
PAAF1-215ENST00000544909 CLCN2P51788 898 aa12.69□□□□□ -0.38
PAAF1-215ENST00000544909 KDSRQ06136 332 aa12.69□□□□□ -0.38
PAAF1-215ENST00000544909 RCN2Q14257 317 aa12.69□□□□□ -0.38
PAAF1-215ENST00000544909 PPP2R5DQ14738 602 aa12.69□□□□□ -0.38
PAAF1-215ENST00000544909 UPP1Q16831 310 aa12.69□□□□□ -0.38
PAAF1-215ENST00000544909 PCID2Q5JVF3 399 aa12.69□□□□□ -0.38
PAAF1-215ENST00000544909 MAP3K21Q5TCX8 1036 aa12.69□□□□□ -0.38
PAAF1-215ENST00000544909 FAM72AQ5TYM5 149 aa12.69□□□□□ -0.38
PAAF1-215ENST00000544909 CAPRIN2Q6IMN6 1127 aaKnown RBP12.69□□□□□ -0.38
PAAF1-215ENST00000544909 FAM72DQ6L9T8 149 aa12.69□□□□□ -0.38
PAAF1-215ENST00000544909 ZCCHC23Q6ZST2 131 aa12.69□□□□□ -0.38
PAAF1-215ENST00000544909 FAM72BQ86X60 149 aa12.69□□□□□ -0.38
PAAF1-215ENST00000544909 IL12RB2Q99665 862 aa12.69□□□□□ -0.38
PAAF1-215ENST00000544909 EBF4Q9BQW3 602 aa12.69□□□□□ -0.38
PAAF1-215ENST00000544909 MLPHQ9BV36 600 aaPredicted RBP12.69□□□□□ -0.38
PAAF1-215ENST00000544909 UBE2OQ9C0C9 1292 aaKnown RBP12.69□□□□□ -0.38
PAAF1-215ENST00000544909 SENP6Q9GZR1 1112 aaPredicted RBP12.69□□□□□ -0.38
PAAF1-215ENST00000544909 ENTPD7Q9NQZ7 604 aa12.69□□□□□ -0.38
PAAF1-215ENST00000544909 SPATS2LQ9NUQ6 558 aaKnown RBP12.69□□□□□ -0.38
PAAF1-215ENST00000544909 PRPF19Q9UMS4 504 aaKnown RBP12.69□□□□□ -0.38
PAAF1-215ENST00000544909 RAP2CQ9Y3L5 183 aa12.69□□□□□ -0.38
PAAF1-215ENST00000544909 SCN10AQ9Y5Y9 1956 aa12.69□□□□□ -0.38
PAAF1-215ENST00000544909 PATJQ8NI35 1801 aa12.69□□□□□ -0.38
PAAF1-215ENST00000544909 G3V2L1 256 aa12.69□□□□□ -0.38
PAAF1-215ENST00000544909 M0QZQ0 153 aa12.69□□□□□ -0.38
PAAF1-215ENST00000544909 INPPL1O15357 1258 aa12.69□□□□□ -0.38
PAAF1-215ENST00000544909 ITM2AO43736 263 aa12.69□□□□□ -0.38
PAAF1-215ENST00000544909 C2P06681 752 aa12.69□□□□□ -0.38
PAAF1-215ENST00000544909 MYL3P08590 195 aa12.69□□□□□ -0.38
PAAF1-215ENST00000544909 KITP10721 976 aa12.69□□□□□ -0.38
PAAF1-215ENST00000544909 PAMP19021 973 aa12.69□□□□□ -0.38
PAAF1-215ENST00000544909 NFKB1P19838 968 aa12.69□□□□□ -0.38
PAAF1-215ENST00000544909 GEMP55040 296 aa12.69□□□□□ -0.38
PAAF1-215ENST00000544909 ITGA9Q13797 1035 aa12.69□□□□□ -0.38
PAAF1-215ENST00000544909 HERC3Q15034 1050 aa12.69□□□□□ -0.38
PAAF1-215ENST00000544909 MANEALQ5VSG8 457 aa12.69□□□□□ -0.38
PAAF1-215ENST00000544909 C1orf146Q5VVC0 180 aa12.69□□□□□ -0.38
PAAF1-215ENST00000544909 LIPMQ5VYY2 423 aa12.69□□□□□ -0.38
PAAF1-215ENST00000544909 BSPRYQ5W0U4 402 aa12.69□□□□□ -0.38
PAAF1-215ENST00000544909 ANO7Q6IWH7 933 aa12.69□□□□□ -0.38
PAAF1-215ENST00000544909 ZYG11AQ6WRX3 759 aa12.69□□□□□ -0.38
PAAF1-215ENST00000544909 RIPOR1Q6ZS17 1223 aa12.69□□□□□ -0.38
PAAF1-215ENST00000544909 TMEM126BQ8IUX1 230 aa12.69□□□□□ -0.38
PAAF1-215ENST00000544909 LRRN4Q8WUT4 740 aa12.69□□□□□ -0.38
PAAF1-215ENST00000544909 SCG3Q8WXD2 468 aaKnown RBP12.69□□□□□ -0.38
PAAF1-215ENST00000544909 ZFP42Q96MM3 310 aa12.69□□□□□ -0.38
PAAF1-215ENST00000544909 KCNK16Q96T55 309 aa12.69□□□□□ -0.38
PAAF1-215ENST00000544909 PTPN18Q99952 460 aa12.69□□□□□ -0.38
PAAF1-215ENST00000544909 RTKNQ9BST9 563 aa12.69□□□□□ -0.38
PAAF1-215ENST00000544909 SYT17Q9BSW7 474 aa12.69□□□□□ -0.38
PAAF1-215ENST00000544909 MTG1Q9BT17 334 aaPredicted RBP12.69□□□□□ -0.38
PAAF1-215ENST00000544909 OSBPL1AQ9BXW6 950 aa12.69□□□□□ -0.38
PAAF1-215ENST00000544909 DRC3Q9H069 523 aa12.69□□□□□ -0.38
PAAF1-215ENST00000544909 ILKAPQ9H0C8 392 aaPredicted RBP12.69□□□□□ -0.38
PAAF1-215ENST00000544909 TKTL2Q9H0I9 626 aa12.69□□□□□ -0.38
PAAF1-215ENST00000544909 SMOC2Q9H3U7 446 aa12.69□□□□□ -0.38
PAAF1-215ENST00000544909 ABCC13Q9NSE7 274 aa12.69□□□□□ -0.38
PAAF1-215ENST00000544909 BCAP29Q9UHQ4 241 aa12.69□□□□□ -0.38
PAAF1-215ENST00000544909 VPS28Q9UK41 221 aa12.69□□□□□ -0.38
PAAF1-215ENST00000544909 TLK1Q9UKI8 766 aa12.69□□□□□ -0.38
PAAF1-215ENST00000544909 ARHGAP26Q9UNA1 814 aa12.69□□□□□ -0.38
PAAF1-215ENST00000544909 A0A088AWK7 358 aa12.68□□□□□ -0.38
PAAF1-215ENST00000544909 MYBPHLA2RUH7 354 aa12.68□□□□□ -0.38
PAAF1-215ENST00000544909 WASH4PA8MWX3 477 aa12.68□□□□□ -0.38
PAAF1-215ENST00000544909 I6L893 689 aaPredicted RBP12.68□□□□□ -0.38
PAAF1-215ENST00000544909 IRAK2O43187 625 aa12.68□□□□□ -0.38
PAAF1-215ENST00000544909 HSPA4LO95757 839 aa12.68□□□□□ -0.38
PAAF1-215ENST00000544909 USP17L7P0C7H9 530 aa12.68□□□□□ -0.38
PAAF1-215ENST00000544909 TYMPP19971 482 aa12.68□□□□□ -0.38
PAAF1-215ENST00000544909 CRABP2P29373 138 aa12.68□□□□□ -0.38
PAAF1-215ENST00000544909 ABL2P42684 1182 aa12.68□□□□□ -0.38
PAAF1-215ENST00000544909 PSEN1P49768 467 aa12.68□□□□□ -0.38
PAAF1-215ENST00000544909 MXRA7P84157 204 aa12.68□□□□□ -0.38
PAAF1-215ENST00000544909 GRIK3Q13003 919 aa12.68□□□□□ -0.38
PAAF1-215ENST00000544909 ZBTB17Q13105 803 aa12.68□□□□□ -0.38
PAAF1-215ENST00000544909 PRKAA1Q13131 559 aa12.68□□□□□ -0.38
PAAF1-215ENST00000544909 SLC12A1Q13621 1099 aa12.68□□□□□ -0.38
PAAF1-215ENST00000544909 CFAP157Q5JU67 520 aa12.68□□□□□ -0.38
PAAF1-215ENST00000544909 C16orf46Q6P387 395 aa12.68□□□□□ -0.38
PAAF1-215ENST00000544909 PKN3Q6P5Z2 889 aa12.68□□□□□ -0.38
PAAF1-215ENST00000544909 ZC3HC1Q86WB0 502 aaKnown RBP12.68□□□□□ -0.38
PAAF1-215ENST00000544909 KCNV2Q8TDN2 545 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms