RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 ANKRD20A4Q4UJ75 823 aa17.4■□□□□ 0.38
PTPRO-209ENST00000543886 C10orf120Q5SQS8 335 aa17.4■□□□□ 0.38
PTPRO-209ENST00000543886 ARTNQ5T4W7 220 aa17.4■□□□□ 0.38
PTPRO-209ENST00000543886 LRRC43Q8N309 656 aa17.4■□□□□ 0.38
PTPRO-209ENST00000543886 C10orf82Q8WW14 230 aa17.4■□□□□ 0.38
PTPRO-209ENST00000543886 SCLYQ96I15 445 aa17.4■□□□□ 0.38
PTPRO-209ENST00000543886 SPATA17Q96L03 361 aa17.4■□□□□ 0.38
PTPRO-209ENST00000543886 DEFB118Q96PH6 123 aa17.4■□□□□ 0.38
PTPRO-209ENST00000543886 FCRL5Q96RD9 977 aa17.4■□□□□ 0.38
PTPRO-209ENST00000543886 TTPALQ9BTX7 342 aa17.4■□□□□ 0.38
PTPRO-209ENST00000543886 OXCT2Q9BYC2 517 aaPredicted RBP17.4■□□□□ 0.38
PTPRO-209ENST00000543886 GLOD4Q9HC38 313 aa17.4■□□□□ 0.38
PTPRO-209ENST00000543886 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.4■□□□□ 0.38
PTPRO-209ENST00000543886 DONSONQ9NYP3 566 aa17.4■□□□□ 0.38
PTPRO-209ENST00000543886 TANC1Q9C0D5 1861 aa17.4■□□□□ 0.38
PTPRO-209ENST00000543886 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.4■□□□□ 0.38
PTPRO-209ENST00000543886 TPP1O14773 563 aa17.4■□□□□ 0.38
PTPRO-209ENST00000543886 HAPLN1P10915 354 aaPredicted RBP17.4■□□□□ 0.38
PTPRO-209ENST00000543886 PAPOLAP51003 745 aaKnown RBP17.4■□□□□ 0.38
PTPRO-209ENST00000543886 PSMD5Q16401 504 aa17.4■□□□□ 0.38
PTPRO-209ENST00000543886 ANO4Q32M45 955 aa17.4■□□□□ 0.38
PTPRO-209ENST00000543886 MS4A13Q5J8X5 152 aa17.4■□□□□ 0.38
PTPRO-209ENST00000543886 GRTP1Q5TC63 336 aa17.4■□□□□ 0.38
PTPRO-209ENST00000543886 FBXW10Q5XX13 1052 aa17.4■□□□□ 0.38
PTPRO-209ENST00000543886 MIB1Q86YT6 1006 aa17.4■□□□□ 0.38
PTPRO-209ENST00000543886 C2orf15Q8WU43 125 aaKnown RBP17.4■□□□□ 0.38
PTPRO-209ENST00000543886 ATP2A3Q93084 1043 aa17.4■□□□□ 0.38
PTPRO-209ENST00000543886 TBL1YQ9BQ87 522 aa17.4■□□□□ 0.38
PTPRO-209ENST00000543886 ZYG11BQ9C0D3 744 aa17.4■□□□□ 0.38
PTPRO-209ENST00000543886 ECT2Q9H8V3 914 aa17.4■□□□□ 0.38
PTPRO-209ENST00000543886 COMMD8Q9NX08 183 aa17.4■□□□□ 0.38
PTPRO-209ENST00000543886 MARCH2Q9P0N8 246 aa17.4■□□□□ 0.38
PTPRO-209ENST00000543886 NYNRINQ9P2P1 1898 aaKnown RBP17.39■□□□□ 0.38
PTPRO-209ENST00000543886 KLF11O14901 512 aa17.39■□□□□ 0.37
PTPRO-209ENST00000543886 TPH1P17752 444 aa17.39■□□□□ 0.37
PTPRO-209ENST00000543886 HNRNPH1P31943 449 aaKnown RBP17.39■□□□□ 0.37
PTPRO-209ENST00000543886 GEMP55040 296 aa17.39■□□□□ 0.37
PTPRO-209ENST00000543886 RPL10AP62906 217 aaKnown RBP17.39■□□□□ 0.37
PTPRO-209ENST00000543886 OVGP1Q12889 678 aa17.39■□□□□ 0.37
PTPRO-209ENST00000543886 BNIP1Q12981 228 aa17.39■□□□□ 0.37
PTPRO-209ENST00000543886 RSPO2Q6UXX9 243 aaPredicted RBP17.39■□□□□ 0.37
PTPRO-209ENST00000543886 KLHDC8BQ8IXV7 354 aa17.39■□□□□ 0.37
PTPRO-209ENST00000543886 IPMKQ8NFU5 416 aa17.39■□□□□ 0.37
PTPRO-209ENST00000543886 SPATA22Q8NHS9 363 aa17.39■□□□□ 0.37
PTPRO-209ENST00000543886 ZNF398Q8TD17 642 aa17.39■□□□□ 0.37
PTPRO-209ENST00000543886 BTN2A3PQ96KV6 586 aa17.39■□□□□ 0.37
PTPRO-209ENST00000543886 LRRC37BQ96QE4 947 aa17.39■□□□□ 0.37
PTPRO-209ENST00000543886 TRIM55Q9BYV6 548 aa17.39■□□□□ 0.37
PTPRO-209ENST00000543886 HIPK3Q9H422 1215 aa17.39■□□□□ 0.37
PTPRO-209ENST00000543886 RBM22Q9NW64 420 aaKnown RBP eCLIP17.39■□□□□ 0.37
PTPRO-209ENST00000543886 SOX13Q9UN79 622 aa17.39■□□□□ 0.37
PTPRO-209ENST00000543886 ZCWPW2A0A1B0GU75 182 aa17.38■□□□□ 0.37
PTPRO-209ENST00000543886 TBC1D4O60343 1298 aa17.38■□□□□ 0.37
PTPRO-209ENST00000543886 TBX18O95935 607 aa17.38■□□□□ 0.37
PTPRO-209ENST00000543886 ALDOAP04075 364 aaKnown RBP17.38■□□□□ 0.37
PTPRO-209ENST00000543886 RHOQP17081 205 aa17.38■□□□□ 0.37
PTPRO-209ENST00000543886 DUSP4Q13115 394 aa17.38■□□□□ 0.37
PTPRO-209ENST00000543886 ATG16L1Q676U5 607 aa17.38■□□□□ 0.37
PTPRO-209ENST00000543886 KYAT3Q6YP21 454 aaKnown RBP17.38■□□□□ 0.37
PTPRO-209ENST00000543886 TFAP2DQ7Z6R9 452 aa17.38■□□□□ 0.37
PTPRO-209ENST00000543886 TMEM173Q86WV6 379 aaPredicted RBP17.38■□□□□ 0.37
PTPRO-209ENST00000543886 CRIPAKQ8N1N5 446 aa17.38■□□□□ 0.37
PTPRO-209ENST00000543886 MFSD3Q96ES6 412 aa17.38■□□□□ 0.37
PTPRO-209ENST00000543886 CRISPLD1Q9H336 500 aa17.38■□□□□ 0.37
PTPRO-209ENST00000543886 SLC40A1Q9NP59 571 aa17.38■□□□□ 0.37
PTPRO-209ENST00000543886 PAK6Q9NQU5 681 aaPredicted RBP17.38■□□□□ 0.37
PTPRO-209ENST00000543886 PRDM5Q9NQX1 630 aaPredicted RBP17.38■□□□□ 0.37
PTPRO-209ENST00000543886 CHRAC1Q9NRG0 131 aa17.38■□□□□ 0.37
PTPRO-209ENST00000543886 PPARGC1AQ9UBK2 798 aaKnown RBP17.38■□□□□ 0.37
PTPRO-209ENST00000543886 IPO11Q9UI26 975 aaKnown RBP17.38■□□□□ 0.37
PTPRO-209ENST00000543886 SCN5AQ14524 2016 aa17.38■□□□□ 0.37
PTPRO-209ENST00000543886 SLC12A8A0AV02 714 aa17.38■□□□□ 0.37
PTPRO-209ENST00000543886 GLRA3O75311 464 aa17.38■□□□□ 0.37
PTPRO-209ENST00000543886 VNN2O95498 520 aa17.38■□□□□ 0.37
PTPRO-209ENST00000543886 MT-CYBP00156 380 aaPredicted RBP17.38■□□□□ 0.37
PTPRO-209ENST00000543886 HLA-DQB2P05538 268 aa17.38■□□□□ 0.37
PTPRO-209ENST00000543886 NDST2P52849 883 aa17.38■□□□□ 0.37
PTPRO-209ENST00000543886 CCL23P55773 120 aa17.38■□□□□ 0.37
PTPRO-209ENST00000543886 RASIP1Q5U651 963 aa17.38■□□□□ 0.37
PTPRO-209ENST00000543886 PRSS55Q6UWB4 352 aaPredicted RBP17.38■□□□□ 0.37
PTPRO-209ENST00000543886 STRA8Q7Z7C7 330 aa17.38■□□□□ 0.37
PTPRO-209ENST00000543886 KCNMB4Q86W47 210 aa17.38■□□□□ 0.37
PTPRO-209ENST00000543886 NUDCD3Q8IVD9 361 aa17.38■□□□□ 0.37
PTPRO-209ENST00000543886 ZNF683Q8IZ20 524 aa17.38■□□□□ 0.37
PTPRO-209ENST00000543886 UMODL1-AS1Q8N2C9 162 aa17.38■□□□□ 0.37
PTPRO-209ENST00000543886 PLCD3Q8N3E9 789 aa17.38■□□□□ 0.37
PTPRO-209ENST00000543886 MECRQ9BV79 373 aa17.38■□□□□ 0.37
PTPRO-209ENST00000543886 C20orf96Q9NUD7 363 aaPredicted RBP17.38■□□□□ 0.37
PTPRO-209ENST00000543886 SAGE1Q9NXZ1 904 aa17.38■□□□□ 0.37
PTPRO-209ENST00000543886 TET1Q8NFU7 2136 aa17.38■□□□□ 0.37
PTPRO-209ENST00000543886 FNDC1Q4ZHG4 1894 aaPredicted RBP17.37■□□□□ 0.37
PTPRO-209ENST00000543886 IL1BP01584 269 aa17.37■□□□□ 0.37
PTPRO-209ENST00000543886 HMBSP08397 361 aa17.37■□□□□ 0.37
PTPRO-209ENST00000543886 SPRP35270 261 aaPredicted RBP17.37■□□□□ 0.37
PTPRO-209ENST00000543886 ATN1P54259 1190 aaPredicted RBP17.37■□□□□ 0.37
PTPRO-209ENST00000543886 TMPRSS15P98073 1019 aa17.37■□□□□ 0.37
PTPRO-209ENST00000543886 STXBP5Q5T5C0 1151 aa17.37■□□□□ 0.37
PTPRO-209ENST00000543886 TAS1R1Q7RTX1 841 aa17.37■□□□□ 0.37
PTPRO-209ENST00000543886 BCL7CQ8WUZ0 217 aaPredicted RBP17.37■□□□□ 0.37
PTPRO-209ENST00000543886 E2F7Q96AV8 911 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms