RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 LRRC57Q8N9N7 239 aa6.46□□□□□ -1.38
LTBR-212ENST00000543542 DCAF4L2Q8NA75 395 aa6.46□□□□□ -1.38
LTBR-212ENST00000543542 IL17RCQ8NAC3 791 aa6.46□□□□□ -1.38
LTBR-212ENST00000543542 NETO2Q8NC67 525 aa6.46□□□□□ -1.38
LTBR-212ENST00000543542 CCNYQ8ND76 341 aa6.46□□□□□ -1.38
LTBR-212ENST00000543542 TSTD1Q8NFU3 115 aa6.46□□□□□ -1.38
LTBR-212ENST00000543542 TRIM58Q8NG06 486 aa6.46□□□□□ -1.38
LTBR-212ENST00000543542 OR52K2Q8NGK3 314 aa6.46□□□□□ -1.38
LTBR-212ENST00000543542 EXD1Q8NHP7 514 aa6.46□□□□□ -1.38
LTBR-212ENST00000543542 KRT35Q92764 455 aa6.46□□□□□ -1.38
LTBR-212ENST00000543542 EZH1Q92800 747 aaPredicted RBP6.46□□□□□ -1.38
LTBR-212ENST00000543542 ARHGEF2Q92974 986 aaKnown RBP6.46□□□□□ -1.38
LTBR-212ENST00000543542 TTC17Q96AE7 1141 aa6.46□□□□□ -1.38
LTBR-212ENST00000543542 HMCESQ96FZ2 354 aa6.46□□□□□ -1.38
LTBR-212ENST00000543542 CCDC114Q96M63 670 aa6.46□□□□□ -1.38
LTBR-212ENST00000543542 ACOX2Q99424 681 aa6.46□□□□□ -1.38
LTBR-212ENST00000543542 SLC39A8Q9C0K1 460 aa6.46□□□□□ -1.38
LTBR-212ENST00000543542 THAP10Q9P2Z0 257 aaPredicted RBP6.46□□□□□ -1.38
LTBR-212ENST00000543542 VPS51Q9UID3 782 aa6.46□□□□□ -1.38
LTBR-212ENST00000543542 INTS6Q9UL03 887 aaKnown RBP6.46□□□□□ -1.38
LTBR-212ENST00000543542 MMP17Q9ULZ9 603 aa6.46□□□□□ -1.38
LTBR-212ENST00000543542 STARD13Q9Y3M8 1113 aa6.46□□□□□ -1.38
LTBR-212ENST00000543542 FARP1Q9Y4F1 1045 aaPredicted RBP6.46□□□□□ -1.38
LTBR-212ENST00000543542 PCDHA3Q9Y5H8 950 aa6.46□□□□□ -1.38
LTBR-212ENST00000543542 HEY1Q9Y5J3 304 aa6.46□□□□□ -1.38
LTBR-212ENST00000543542 RAD54BQ9Y620 910 aa6.46□□□□□ -1.38
LTBR-212ENST00000543542 ATG2BQ96BY7 2078 aa6.46□□□□□ -1.38
LTBR-212ENST00000543542 KMT2EQ8IZD2 1858 aa6.45□□□□□ -1.38
LTBR-212ENST00000543542 EDDM13A0A1B0GTR0 161 aa6.45□□□□□ -1.38
LTBR-212ENST00000543542 TCRBV21S2A2A0A5A6 115 aa6.45□□□□□ -1.38
LTBR-212ENST00000543542 ZSCAN5CA6NGD5 496 aaPredicted RBP6.45□□□□□ -1.38
LTBR-212ENST00000543542 TTC34A8MYJ7 566 aa6.45□□□□□ -1.38
LTBR-212ENST00000543542 CHURC1-FNTBB4DL54 471 aa6.45□□□□□ -1.38
LTBR-212ENST00000543542 DCLK1O15075 740 aa6.45□□□□□ -1.38
LTBR-212ENST00000543542 KDELR3O43731 214 aa6.45□□□□□ -1.38
LTBR-212ENST00000543542 CST8O60676 142 aa6.45□□□□□ -1.38
LTBR-212ENST00000543542 MAP3K6O95382 1288 aa6.45□□□□□ -1.38
LTBR-212ENST00000543542 ACADMP11310 421 aa6.45□□□□□ -1.38
LTBR-212ENST00000543542 KRT10P13645 584 aa6.45□□□□□ -1.38
LTBR-212ENST00000543542 MX2P20592 715 aa6.45□□□□□ -1.38
LTBR-212ENST00000543542 PRKCHP24723 683 aa6.45□□□□□ -1.38
LTBR-212ENST00000543542 MARCKSL1P49006 195 aa6.45□□□□□ -1.38
LTBR-212ENST00000543542 PXNP49023 591 aaPredicted RBP6.45□□□□□ -1.38
LTBR-212ENST00000543542 ARSEP51690 589 aa6.45□□□□□ -1.38
LTBR-212ENST00000543542 DGKEP52429 567 aa6.45□□□□□ -1.38
LTBR-212ENST00000543542 COPS2P61201 443 aa6.45□□□□□ -1.38
LTBR-212ENST00000543542 SATB1Q01826 763 aa6.45□□□□□ -1.38
LTBR-212ENST00000543542 SLC20A2Q08357 652 aa6.45□□□□□ -1.38
LTBR-212ENST00000543542 ZNF211Q13398 564 aaPredicted RBP6.45□□□□□ -1.38
LTBR-212ENST00000543542 FZD5Q13467 585 aa6.45□□□□□ -1.38
LTBR-212ENST00000543542 SERINC3Q13530 473 aa6.45□□□□□ -1.38
LTBR-212ENST00000543542 GAS6Q14393 721 aa6.45□□□□□ -1.38
LTBR-212ENST00000543542 ANGPT1Q15389 498 aa6.45□□□□□ -1.38
LTBR-212ENST00000543542 DLG2Q15700 870 aa6.45□□□□□ -1.38
LTBR-212ENST00000543542 CRY1Q16526 586 aa6.45□□□□□ -1.38
LTBR-212ENST00000543542 RNF43Q68DV7 783 aa6.45□□□□□ -1.38
LTBR-212ENST00000543542 NCBP2-AS2Q69YL0 99 aa6.45□□□□□ -1.38
LTBR-212ENST00000543542 HEATR6Q6AI08 1181 aaKnown RBP6.45□□□□□ -1.38
LTBR-212ENST00000543542 ANO7Q6IWH7 933 aa6.45□□□□□ -1.38
LTBR-212ENST00000543542 TSSK4Q6SA08 328 aa6.45□□□□□ -1.38
LTBR-212ENST00000543542 KIAA1324Q6UXG2 1013 aaKnown RBP6.45□□□□□ -1.38
LTBR-212ENST00000543542 ZNF662Q6ZS27 426 aa6.45□□□□□ -1.38
LTBR-212ENST00000543542 BZW1Q7L1Q6 419 aaKnown RBP6.45□□□□□ -1.38
LTBR-212ENST00000543542 SYT13Q7L8C5 426 aa6.45□□□□□ -1.38
LTBR-212ENST00000543542 CACUL1Q86Y37 369 aa6.45□□□□□ -1.38
LTBR-212ENST00000543542 ZNF687Q8N1G0 1237 aa6.45□□□□□ -1.38
LTBR-212ENST00000543542 UMODL1-AS1Q8N2C9 162 aa6.45□□□□□ -1.38
LTBR-212ENST00000543542 BBS5Q8N3I7 341 aa6.45□□□□□ -1.38
LTBR-212ENST00000543542 SH2D3CQ8N5H7 860 aa6.45□□□□□ -1.38
LTBR-212ENST00000543542 PCDH19Q8TAB3 1148 aa6.45□□□□□ -1.38
LTBR-212ENST00000543542 GANCQ8TET4 914 aa6.45□□□□□ -1.38
LTBR-212ENST00000543542 UBE2Q2Q8WVN8 375 aa6.45□□□□□ -1.38
LTBR-212ENST00000543542 HMGB4Q8WW32 186 aa6.45□□□□□ -1.38
LTBR-212ENST00000543542 P3H4Q92791 437 aa6.45□□□□□ -1.38
LTBR-212ENST00000543542 HAUS1Q96CS2 278 aa6.45□□□□□ -1.38
LTBR-212ENST00000543542 ALG14Q96F25 216 aa6.45□□□□□ -1.38
LTBR-212ENST00000543542 LMLNQ96KR4 655 aa6.45□□□□□ -1.38
LTBR-212ENST00000543542 RNF157Q96PX1 679 aa6.45□□□□□ -1.38
LTBR-212ENST00000543542 HHIPQ96QV1 700 aa6.45□□□□□ -1.38
LTBR-212ENST00000543542 PSMB7Q99436 277 aa6.45□□□□□ -1.38
LTBR-212ENST00000543542 HEMGNQ9BXL5 484 aa6.45□□□□□ -1.38
LTBR-212ENST00000543542 PRDM16Q9HAZ2 1276 aa6.45□□□□□ -1.38
LTBR-212ENST00000543542 C11orf16Q9NQ32 467 aa6.45□□□□□ -1.38
LTBR-212ENST00000543542 ETNK2Q9NVF9 386 aa6.45□□□□□ -1.38
LTBR-212ENST00000543542 POLR3BQ9NW08 1133 aaPredicted RBP6.45□□□□□ -1.38
LTBR-212ENST00000543542 DLGAP2Q9P1A6 1054 aa6.45□□□□□ -1.38
LTBR-212ENST00000543542 UBA2Q9UBT2 640 aaPredicted RBP6.45□□□□□ -1.38
LTBR-212ENST00000543542 SLCO3A1Q9UIG8 710 aa6.45□□□□□ -1.38
LTBR-212ENST00000543542 PYCARDQ9ULZ3 195 aa6.45□□□□□ -1.38
LTBR-212ENST00000543542 NEU3Q9UQ49 428 aa6.45□□□□□ -1.38
LTBR-212ENST00000543542 MFHAS1Q9Y4C4 1052 aa6.45□□□□□ -1.38
LTBR-212ENST00000543542 NYNRINQ9P2P1 1898 aaKnown RBP6.45□□□□□ -1.38
LTBR-212ENST00000543542 SHROOM3Q8TF72 1996 aa6.44□□□□□ -1.38
LTBR-212ENST00000543542 TECTAO75443 2155 aa6.44□□□□□ -1.38
LTBR-212ENST00000543542 hCG_1818297A0A087WSY0 165 aa6.44□□□□□ -1.38
LTBR-212ENST00000543542 TARSL2A2RTX5 802 aaKnown RBP6.44□□□□□ -1.38
LTBR-212ENST00000543542 ZNF487B1APH4 448 aa6.44□□□□□ -1.38
LTBR-212ENST00000543542 H7C0C1 242 aa6.44□□□□□ -1.38
LTBR-212ENST00000543542 J3KR12 359 aa6.44□□□□□ -1.38
LTBR-212ENST00000543542 KCNK3O14649 394 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms