RNA–Protein interactions for RNA: ENST00000543162.1

DDB1-221, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-221ENST00000543162 C4orf22Q6V702 233 aa10.91□□□□□ -0.66
DDB1-221ENST00000543162 PRUNE1Q86TP1 453 aa10.91□□□□□ -0.66
DDB1-221ENST00000543162 IFT20Q8IY31 132 aa10.91□□□□□ -0.66
DDB1-221ENST00000543162 GLIS1Q8NBF1 620 aa10.91□□□□□ -0.66
DDB1-221ENST00000543162 WFDC5Q8TCV5 224 aa10.91□□□□□ -0.66
DDB1-221ENST00000543162 NSMCE1Q8WV22 266 aa10.91□□□□□ -0.66
DDB1-221ENST00000543162 RUBCNQ92622 972 aa10.91□□□□□ -0.66
DDB1-221ENST00000543162 FGF14Q92915 247 aa10.91□□□□□ -0.66
DDB1-221ENST00000543162 FATE1Q969F0 183 aa10.91□□□□□ -0.66
DDB1-221ENST00000543162 FAM83CQ9BQN1 747 aa10.91□□□□□ -0.66
DDB1-221ENST00000543162 FEM1AQ9BSK4 669 aa10.91□□□□□ -0.66
DDB1-221ENST00000543162 SLC2A11Q9BYW1 496 aa10.91□□□□□ -0.66
DDB1-221ENST00000543162 PLA2G2FQ9BZM2 168 aa10.91□□□□□ -0.66
DDB1-221ENST00000543162 DPH5Q9H2P9 285 aa10.91□□□□□ -0.66
DDB1-221ENST00000543162 EBF3Q9H4W6 596 aa10.91□□□□□ -0.66
DDB1-221ENST00000543162 EPB41L5Q9HCM4 733 aa10.91□□□□□ -0.66
DDB1-221ENST00000543162 ATP13A1Q9HD20 1204 aa10.91□□□□□ -0.66
DDB1-221ENST00000543162 KIAA1522Q9P206 1035 aaPredicted RBP10.91□□□□□ -0.66
DDB1-221ENST00000543162 PAK5Q9P286 719 aa10.91□□□□□ -0.66
DDB1-221ENST00000543162 VPS28Q9UK41 221 aa10.91□□□□□ -0.66
DDB1-221ENST00000543162 NYNRINQ9P2P1 1898 aaKnown RBP10.91□□□□□ -0.66
DDB1-221ENST00000543162 MYOFQ9NZM1 2061 aa10.91□□□□□ -0.66
DDB1-221ENST00000543162 CHD5Q8TDI0 1954 aa10.9□□□□□ -0.66
DDB1-221ENST00000543162 KIF26AQ9ULI4 1882 aaPredicted RBP10.9□□□□□ -0.66
DDB1-221ENST00000543162 A0A0A0MRY4 1105 aa10.9□□□□□ -0.66
DDB1-221ENST00000543162 ESYT3A0FGR9 886 aa10.9□□□□□ -0.66
DDB1-221ENST00000543162 ANHXE9PGG2 379 aa10.9□□□□□ -0.66
DDB1-221ENST00000543162 J3KR12 359 aa10.9□□□□□ -0.66
DDB1-221ENST00000543162 CBX4O00257 560 aa10.9□□□□□ -0.66
DDB1-221ENST00000543162 CHADO15335 359 aa10.9□□□□□ -0.66
DDB1-221ENST00000543162 KDELR3O43731 214 aa10.9□□□□□ -0.66
DDB1-221ENST00000543162 PRAMEF11O60813 436 aa10.9□□□□□ -0.66
DDB1-221ENST00000543162 OPHN1O60890 802 aa10.9□□□□□ -0.66
DDB1-221ENST00000543162 NEBLO76041 1014 aa10.9□□□□□ -0.66
DDB1-221ENST00000543162 JCHAINP01591 159 aa10.9□□□□□ -0.66
DDB1-221ENST00000543162 TUBBP07437 444 aa10.9□□□□□ -0.66
DDB1-221ENST00000543162 CCNB1P14635 433 aa10.9□□□□□ -0.66
DDB1-221ENST00000543162 MCM3P25205 808 aa10.9□□□□□ -0.66
DDB1-221ENST00000543162 PTPN3P26045 913 aa10.9□□□□□ -0.66
DDB1-221ENST00000543162 MZF1P28698 734 aaPredicted RBP10.9□□□□□ -0.66
DDB1-221ENST00000543162 GDI1P31150 447 aa10.9□□□□□ -0.66
DDB1-221ENST00000543162 RPL22P35268 128 aaKnown RBP10.9□□□□□ -0.66
DDB1-221ENST00000543162 CSKP41240 450 aa10.9□□□□□ -0.66
DDB1-221ENST00000543162 NUMBP49757 651 aa10.9□□□□□ -0.66
DDB1-221ENST00000543162 NRLP54845 237 aa10.9□□□□□ -0.66
DDB1-221ENST00000543162 DRG2P55039 364 aaKnown RBP10.9□□□□□ -0.66
DDB1-221ENST00000543162 IFI35P80217 286 aaPredicted RBP10.9□□□□□ -0.66
DDB1-221ENST00000543162 WASHC5Q12768 1159 aa10.9□□□□□ -0.66
DDB1-221ENST00000543162 LMAN2Q12907 356 aa10.9□□□□□ -0.66
DDB1-221ENST00000543162 NR1H3Q13133 447 aa10.9□□□□□ -0.66
DDB1-221ENST00000543162 SLC12A1Q13621 1099 aa10.9□□□□□ -0.66
DDB1-221ENST00000543162 HTR4Q13639 388 aa10.9□□□□□ -0.66
DDB1-221ENST00000543162 LEXMQ3ZCV2 418 aa10.9□□□□□ -0.66
DDB1-221ENST00000543162 ARHGEF18Q6ZSZ5 1173 aa10.9□□□□□ -0.66
DDB1-221ENST00000543162 CPA6Q8N4T0 437 aa10.9□□□□□ -0.66
DDB1-221ENST00000543162 NAT16Q8N8M0 369 aa10.9□□□□□ -0.66
DDB1-221ENST00000543162 CCDC110Q8TBZ0 833 aa10.9□□□□□ -0.66
DDB1-221ENST00000543162 LRRC45Q96CN5 670 aa10.9□□□□□ -0.66
DDB1-221ENST00000543162 SNF8Q96H20 258 aa10.9□□□□□ -0.66
DDB1-221ENST00000543162 SPATA13Q96N96 652 aa10.9□□□□□ -0.66
DDB1-221ENST00000543162 XPO6Q96QU8 1125 aaKnown RBP10.9□□□□□ -0.66
DDB1-221ENST00000543162 PNKPQ96T60 521 aa10.9□□□□□ -0.66
DDB1-221ENST00000543162 VAT1Q99536 393 aa10.9□□□□□ -0.66
DDB1-221ENST00000543162 TRMT61BQ9BVS5 477 aaKnown RBP10.9□□□□□ -0.66
DDB1-221ENST00000543162 PHF7Q9BWX1 381 aaPredicted RBP10.9□□□□□ -0.66
DDB1-221ENST00000543162 ACE2Q9BYF1 805 aaPredicted RBP10.9□□□□□ -0.66
DDB1-221ENST00000543162 CEP41Q9BYV8 373 aa10.9□□□□□ -0.66
DDB1-221ENST00000543162 ECT2Q9H8V3 914 aa10.9□□□□□ -0.66
DDB1-221ENST00000543162 ABCB8Q9NUT2 735 aa10.9□□□□□ -0.66
DDB1-221ENST00000543162 KLHL8Q9P2G9 620 aaPredicted RBP10.9□□□□□ -0.66
DDB1-221ENST00000543162 TRHDEQ9UKU6 1024 aa10.9□□□□□ -0.66
DDB1-221ENST00000543162 CLEC4EQ9ULY5 219 aa10.9□□□□□ -0.66
DDB1-221ENST00000543162 SNX24Q9Y343 169 aa10.9□□□□□ -0.66
DDB1-221ENST00000543162 OR51B4Q9Y5P0 310 aa10.9□□□□□ -0.66
DDB1-221ENST00000543162 NUMBLQ9Y6R0 609 aa10.9□□□□□ -0.66
DDB1-221ENST00000543162 REV3LO60673 3130 aa10.89□□□□□ -0.67
DDB1-221ENST00000543162 C2CD4DB7Z1M9 353 aa10.89□□□□□ -0.67
DDB1-221ENST00000543162 BHMG1C9JSJ3 638 aaPredicted RBP10.89□□□□□ -0.67
DDB1-221ENST00000543162 CACNG3O60359 315 aa10.89□□□□□ -0.67
DDB1-221ENST00000543162 CD70P32970 193 aa10.89□□□□□ -0.67
DDB1-221ENST00000543162 RPL21P46778 160 aaKnown RBP10.89□□□□□ -0.67
DDB1-221ENST00000543162 RENBPP51606 427 aa10.89□□□□□ -0.67
DDB1-221ENST00000543162 PLK1P53350 603 aa10.89□□□□□ -0.67
DDB1-221ENST00000543162 TNK2Q07912 1038 aa10.89□□□□□ -0.67
DDB1-221ENST00000543162 ZBTB17Q13105 803 aa10.89□□□□□ -0.67
DDB1-221ENST00000543162 CALCOCO2Q13137 446 aa10.89□□□□□ -0.67
DDB1-221ENST00000543162 CUL1Q13616 776 aa10.89□□□□□ -0.67
DDB1-221ENST00000543162 RUNX3Q13761 415 aa10.89□□□□□ -0.67
DDB1-221ENST00000543162 HNRNPDQ14103 355 aaKnown RBP10.89□□□□□ -0.67
DDB1-221ENST00000543162 TEX44Q53QW1 395 aa10.89□□□□□ -0.67
DDB1-221ENST00000543162 ANKRD20A2Q5SQ80 823 aa10.89□□□□□ -0.67
DDB1-221ENST00000543162 TMCO4Q5TGY1 634 aa10.89□□□□□ -0.67
DDB1-221ENST00000543162 ANKRD20A1Q5TYW2 823 aa10.89□□□□□ -0.67
DDB1-221ENST00000543162 MARC1Q5VT66 337 aa10.89□□□□□ -0.67
DDB1-221ENST00000543162 ANKRD20A3Q5VUR7 823 aa10.89□□□□□ -0.67
DDB1-221ENST00000543162 LEKR1Q6ZMV7 388 aa10.89□□□□□ -0.67
DDB1-221ENST00000543162 PID1Q7Z2X4 250 aa10.89□□□□□ -0.67
DDB1-221ENST00000543162 ZNF567Q8N184 647 aa10.89□□□□□ -0.67
DDB1-221ENST00000543162 PLCD3Q8N3E9 789 aa10.89□□□□□ -0.67
DDB1-221ENST00000543162 TAB3Q8N5C8 712 aaPredicted RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms