RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 ASTN1O14525 1302 aa13.31□□□□□ -0.28
TNC-212ENST00000542877 DIP2BQ9P265 1576 aa13.31□□□□□ -0.28
TNC-212ENST00000542877 RGSL1A5PLK6 1076 aa13.31□□□□□ -0.28
TNC-212ENST00000542877 IFRD1O00458 451 aaPredicted RBP13.31□□□□□ -0.28
TNC-212ENST00000542877 KCNH1O95259 989 aa13.31□□□□□ -0.28
TNC-212ENST00000542877 ABCB1P08183 1280 aaPredicted RBP13.31□□□□□ -0.28
TNC-212ENST00000542877 ITGB6P18564 788 aa13.31□□□□□ -0.28
TNC-212ENST00000542877 ATP5F1P24539 256 aaPredicted RBP13.31□□□□□ -0.28
TNC-212ENST00000542877 PLK1P53350 603 aa13.31□□□□□ -0.28
TNC-212ENST00000542877 PDK3Q15120 406 aa13.31□□□□□ -0.28
TNC-212ENST00000542877 NRF1Q16656 503 aa13.31□□□□□ -0.28
TNC-212ENST00000542877 SHROOM1Q2M3G4 852 aaPredicted RBP13.31□□□□□ -0.28
TNC-212ENST00000542877 ALFQ53S48 1182 aa13.31□□□□□ -0.28
TNC-212ENST00000542877 MARK2Q7KZI7 788 aaKnown RBP13.31□□□□□ -0.28
TNC-212ENST00000542877 ZNF438Q7Z4V0 828 aa13.31□□□□□ -0.28
TNC-212ENST00000542877 UNC93AQ86WB7 457 aa13.31□□□□□ -0.28
TNC-212ENST00000542877 TSPAN14Q8NG11 270 aa13.31□□□□□ -0.28
TNC-212ENST00000542877 RP9Q8TA86 221 aaKnown RBP13.31□□□□□ -0.28
TNC-212ENST00000542877 PTCD3Q96EY7 689 aaKnown RBP13.31□□□□□ -0.28
TNC-212ENST00000542877 CERS2Q96G23 380 aa13.31□□□□□ -0.28
TNC-212ENST00000542877 TMEM106CQ9BVX2 250 aa13.31□□□□□ -0.28
TNC-212ENST00000542877 REEP1Q9H902 201 aa13.31□□□□□ -0.28
TNC-212ENST00000542877 PTPRHQ9HD43 1115 aa13.31□□□□□ -0.28
TNC-212ENST00000542877 OPTCQ9UBM4 332 aa13.31□□□□□ -0.28
TNC-212ENST00000542877 GTF2A1LQ9UNN4 478 aa13.31□□□□□ -0.28
TNC-212ENST00000542877 COMMD3-BMI1R4GMX3 469 aa13.31□□□□□ -0.28
TNC-212ENST00000542877 PIK3C2BO00750 1634 aa13.31□□□□□ -0.28
TNC-212ENST00000542877 URODP06132 367 aa13.31□□□□□ -0.28
TNC-212ENST00000542877 SNRPB2P08579 225 aaKnown RBP13.31□□□□□ -0.28
TNC-212ENST00000542877 ANPEPP15144 967 aa13.31□□□□□ -0.28
TNC-212ENST00000542877 RPL5P46777 297 aaKnown RBP13.31□□□□□ -0.28
TNC-212ENST00000542877 INO80DQ53TQ3 878 aaPredicted RBP13.31□□□□□ -0.28
TNC-212ENST00000542877 ARMC3Q5W041 872 aa13.31□□□□□ -0.28
TNC-212ENST00000542877 IL27RAQ6UWB1 636 aa13.31□□□□□ -0.28
TNC-212ENST00000542877 MTSS1LQ765P7 747 aa13.31□□□□□ -0.28
TNC-212ENST00000542877 STAG3L4Q8TBR4 150 aa13.31□□□□□ -0.28
TNC-212ENST00000542877 WNT8BQ93098 351 aa13.31□□□□□ -0.28
TNC-212ENST00000542877 DNAJC19Q96DA6 116 aa13.31□□□□□ -0.28
TNC-212ENST00000542877 TRIM8Q9BZR9 551 aa13.31□□□□□ -0.28
TNC-212ENST00000542877 NOL6Q9H6R4 1146 aaKnown RBP13.31□□□□□ -0.28
TNC-212ENST00000542877 TMEM216Q9P0N5 145 aa13.31□□□□□ -0.28
TNC-212ENST00000542877 MTF2Q9Y483 593 aaPredicted RBP13.31□□□□□ -0.28
TNC-212ENST00000542877 TIMM13Q9Y5L4 95 aaPredicted RBP13.31□□□□□ -0.28
TNC-212ENST00000542877 AHCYL1O43865 530 aa13.31□□□□□ -0.28
TNC-212ENST00000542877 SERPINA6P08185 405 aa13.31□□□□□ -0.28
TNC-212ENST00000542877 ZNF286BP0CG31 522 aa13.31□□□□□ -0.28
TNC-212ENST00000542877 HPGDP15428 266 aa13.31□□□□□ -0.28
TNC-212ENST00000542877 PAICSP22234 425 aaKnown RBP13.31□□□□□ -0.28
TNC-212ENST00000542877 FEN1P39748 380 aaKnown RBP13.31□□□□□ -0.28
TNC-212ENST00000542877 GPR15P49685 360 aa13.31□□□□□ -0.28
TNC-212ENST00000542877 AMPD2Q01433 879 aa13.31□□□□□ -0.28
TNC-212ENST00000542877 BST1Q10588 318 aa13.31□□□□□ -0.28
TNC-212ENST00000542877 TAB1Q15750 504 aa13.31□□□□□ -0.28
TNC-212ENST00000542877 ATAD3BQ5T9A4 648 aa13.31□□□□□ -0.28
TNC-212ENST00000542877 ZNF483Q8TF39 744 aaPredicted RBP13.31□□□□□ -0.28
TNC-212ENST00000542877 SLC16A10Q8TF71 515 aa13.31□□□□□ -0.28
TNC-212ENST00000542877 MED8Q96G25 268 aa13.31□□□□□ -0.28
TNC-212ENST00000542877 MBOAT7Q96N66 472 aa13.31□□□□□ -0.28
TNC-212ENST00000542877 GINS4Q9BRT9 223 aa13.31□□□□□ -0.28
TNC-212ENST00000542877 TKTL2Q9H0I9 626 aa13.31□□□□□ -0.28
TNC-212ENST00000542877 CLEC4MQ9H2X3 399 aaPredicted RBP13.31□□□□□ -0.28
TNC-212ENST00000542877 ACSS3Q9H6R3 686 aa13.31□□□□□ -0.28
TNC-212ENST00000542877 H3BN98 237 aa13.31□□□□□ -0.28
TNC-212ENST00000542877 TRIM38O00635 465 aa13.31□□□□□ -0.28
TNC-212ENST00000542877 FSCN2O14926 492 aa13.31□□□□□ -0.28
TNC-212ENST00000542877 EPHB6O15197 1021 aa13.31□□□□□ -0.28
TNC-212ENST00000542877 FGF10O15520 208 aaPredicted RBP13.31□□□□□ -0.28
TNC-212ENST00000542877 TAL1P17542 331 aaPredicted RBP13.31□□□□□ -0.28
TNC-212ENST00000542877 ATP6V1C1P21283 382 aa13.31□□□□□ -0.28
TNC-212ENST00000542877 GRK4P32298 578 aa13.31□□□□□ -0.28
TNC-212ENST00000542877 CASP5P51878 434 aa13.31□□□□□ -0.28
TNC-212ENST00000542877 NAGLUP54802 743 aa13.31□□□□□ -0.28
TNC-212ENST00000542877 TNK2Q07912 1038 aa13.31□□□□□ -0.28
TNC-212ENST00000542877 DNAJC14Q6Y2X3 702 aaPredicted RBP13.31□□□□□ -0.28
TNC-212ENST00000542877 TLK2Q86UE8 772 aa13.31□□□□□ -0.28
TNC-212ENST00000542877 PHF13Q86YI8 300 aaPredicted RBP13.31□□□□□ -0.28
TNC-212ENST00000542877 PHACTR4Q8IZ21 702 aa13.31□□□□□ -0.28
TNC-212ENST00000542877 PCSK9Q8NBP7 692 aaKnown RBP13.31□□□□□ -0.28
TNC-212ENST00000542877 CENPIQ92674 756 aaPredicted RBP13.31□□□□□ -0.28
TNC-212ENST00000542877 SERAC1Q96JX3 654 aa13.31□□□□□ -0.28
TNC-212ENST00000542877 IDI2Q9BXS1 227 aa13.31□□□□□ -0.28
TNC-212ENST00000542877 PORCNQ9H237 461 aa13.31□□□□□ -0.28
TNC-212ENST00000542877 CYP3A7-CYP3A51PA0A087WV96 503 aa13.3□□□□□ -0.28
TNC-212ENST00000542877 TMEM150BA6NC51 233 aa13.3□□□□□ -0.28
TNC-212ENST00000542877 RGL2O15211 777 aa13.3□□□□□ -0.28
TNC-212ENST00000542877 USP12O75317 370 aa13.3□□□□□ -0.28
TNC-212ENST00000542877 CYP3A7P24462 503 aa13.3□□□□□ -0.28
TNC-212ENST00000542877 HPCAL1P37235 193 aa13.3□□□□□ -0.28
TNC-212ENST00000542877 IFNGR2P38484 337 aa13.3□□□□□ -0.28
TNC-212ENST00000542877 MMP13P45452 471 aa13.3□□□□□ -0.28
TNC-212ENST00000542877 ALDH9A1P49189 494 aa13.3□□□□□ -0.28
TNC-212ENST00000542877 IL2P60568 153 aa13.3□□□□□ -0.28
TNC-212ENST00000542877 PSME3P61289 254 aa13.3□□□□□ -0.28
TNC-212ENST00000542877 BFSP2Q13515 415 aa13.3□□□□□ -0.28
TNC-212ENST00000542877 AAGABQ6PD74 315 aa13.3□□□□□ -0.28
TNC-212ENST00000542877 ITIH5Q86UX2 942 aa13.3□□□□□ -0.28
TNC-212ENST00000542877 SYTL1Q8IYJ3 562 aa13.3□□□□□ -0.28
TNC-212ENST00000542877 ZCCHC2Q9C0B9 1178 aaKnown RBP13.3□□□□□ -0.28
TNC-212ENST00000542877 POLR1EQ9GZS1 481 aaKnown RBP13.3□□□□□ -0.28
TNC-212ENST00000542877 ATXN3LQ9H3M9 355 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms