RNA–Protein interactions for RNA: ENST00000542866.2

KDM3B-209, Transcript of lysine demethylase 3B, humanhuman

TSL 2 BASIC

Gene KDM3B, Length 3,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-209ENST00000542866 PDAP1Q13442 181 aaKnown RBP5.41□□□□□ -1.54
KDM3B-209ENST00000542866 LAMC2Q13753 1193 aa5.41□□□□□ -1.54
KDM3B-209ENST00000542866 LSM12Q3MHD2 195 aaKnown RBP5.41□□□□□ -1.54
KDM3B-209ENST00000542866 ANKDD1AQ495B1 522 aa5.41□□□□□ -1.54
KDM3B-209ENST00000542866 C4orf46Q504U0 113 aa5.41□□□□□ -1.54
KDM3B-209ENST00000542866 XKR3Q5GH77 459 aa5.41□□□□□ -1.54
KDM3B-209ENST00000542866 HEATR6Q6AI08 1181 aaKnown RBP5.41□□□□□ -1.54
KDM3B-209ENST00000542866 KCNT2Q6UVM3 1135 aa5.41□□□□□ -1.54
KDM3B-209ENST00000542866 CYP2R1Q6VVX0 501 aa5.41□□□□□ -1.54
KDM3B-209ENST00000542866 ZNF534Q76KX8 674 aa5.41□□□□□ -1.54
KDM3B-209ENST00000542866 C11orf96Q7Z7L8 435 aa5.41□□□□□ -1.54
KDM3B-209ENST00000542866 VSIG10LQ86VR7 867 aa5.41□□□□□ -1.54
KDM3B-209ENST00000542866 CDKL3Q8IVW4 592 aaPredicted RBP5.41□□□□□ -1.54
KDM3B-209ENST00000542866 BRSK2Q8IWQ3 736 aa5.41□□□□□ -1.54
KDM3B-209ENST00000542866 SLC4A11Q8NBS3 891 aa5.41□□□□□ -1.54
KDM3B-209ENST00000542866 MCUQ8NE86 351 aa5.41□□□□□ -1.54
KDM3B-209ENST00000542866 CD99L2Q8TCZ2 262 aa5.41□□□□□ -1.54
KDM3B-209ENST00000542866 ACMSDQ8TDX5 336 aa5.41□□□□□ -1.54
KDM3B-209ENST00000542866 SEPT1Q8WYJ6 367 aa5.41□□□□□ -1.54
KDM3B-209ENST00000542866 LRTOMTQ8WZ04 291 aa5.41□□□□□ -1.54
KDM3B-209ENST00000542866 THAP11Q96EK4 314 aa5.41□□□□□ -1.54
KDM3B-209ENST00000542866 RMND5BQ96G75 393 aaPredicted RBP5.41□□□□□ -1.54
KDM3B-209ENST00000542866 FAM167AQ96KS9 214 aa5.41□□□□□ -1.54
KDM3B-209ENST00000542866 KLHL32Q96NJ5 620 aa5.41□□□□□ -1.54
KDM3B-209ENST00000542866 TWNKQ96RR1 684 aa5.41□□□□□ -1.54
KDM3B-209ENST00000542866 CNPY3Q9BT09 278 aa5.41□□□□□ -1.54
KDM3B-209ENST00000542866 MAGEB5Q9BZ81 275 aa5.41□□□□□ -1.54
KDM3B-209ENST00000542866 ILKAPQ9H0C8 392 aaPredicted RBP5.41□□□□□ -1.54
KDM3B-209ENST00000542866 PCDHAC1Q9H158 963 aa5.41□□□□□ -1.54
KDM3B-209ENST00000542866 VTA1Q9NP79 307 aa5.41□□□□□ -1.54
KDM3B-209ENST00000542866 PDLIM7Q9NR12 457 aa5.41□□□□□ -1.54
KDM3B-209ENST00000542866 MOCS1Q9NZB8 636 aa5.41□□□□□ -1.54
KDM3B-209ENST00000542866 PCDH10Q9P2E7 1040 aa5.41□□□□□ -1.54
KDM3B-209ENST00000542866 HMGXB4Q9UGU5 601 aa5.41□□□□□ -1.54
KDM3B-209ENST00000542866 MYRFQ9Y2G1 1151 aa5.41□□□□□ -1.54
KDM3B-209ENST00000542866 PCDHB12Q9Y5F1 795 aa5.41□□□□□ -1.54
KDM3B-209ENST00000542866 STYXL1Q9Y6J8 313 aa5.41□□□□□ -1.54
KDM3B-209ENST00000542866 GOLGB1Q14789 3259 aaKnown RBP5.41□□□□□ -1.54
KDM3B-209ENST00000542866 LTBP1Q14766 1721 aa5.41□□□□□ -1.54
KDM3B-209ENST00000542866 C7orf72A4D263 438 aa5.41□□□□□ -1.54
KDM3B-209ENST00000542866 M0QZ92 97 aa5.41□□□□□ -1.54
KDM3B-209ENST00000542866 GIPC1O14908 333 aa5.41□□□□□ -1.54
KDM3B-209ENST00000542866 XPOTO43592 962 aaKnown RBP5.41□□□□□ -1.54
KDM3B-209ENST00000542866 ZNF23P17027 643 aa5.41□□□□□ -1.54
KDM3B-209ENST00000542866 CYP2F1P24903 491 aa5.41□□□□□ -1.54
KDM3B-209ENST00000542866 NAMPTP43490 491 aa5.41□□□□□ -1.54
KDM3B-209ENST00000542866 ASPAP45381 313 aa5.41□□□□□ -1.54
KDM3B-209ENST00000542866 HARS2P49590 506 aaKnown RBP5.41□□□□□ -1.54
KDM3B-209ENST00000542866 CDK9P50750 372 aaKnown RBP5.41□□□□□ -1.54
KDM3B-209ENST00000542866 NDST2P52849 883 aa5.41□□□□□ -1.54
KDM3B-209ENST00000542866 SLC5A3P53794 718 aa5.41□□□□□ -1.54
KDM3B-209ENST00000542866 DLG2Q15700 870 aa5.41□□□□□ -1.54
KDM3B-209ENST00000542866 MGAT5BQ3V5L5 792 aa5.41□□□□□ -1.54
KDM3B-209ENST00000542866 GNASQ5JWF2 1037 aa5.41□□□□□ -1.54
KDM3B-209ENST00000542866 SLC9A4Q6AI14 798 aa5.41□□□□□ -1.54
KDM3B-209ENST00000542866 GPR141Q7Z602 305 aa5.41□□□□□ -1.54
KDM3B-209ENST00000542866 TMEM110Q86TL2 294 aa5.41□□□□□ -1.54
KDM3B-209ENST00000542866 BBS5Q8N3I7 341 aa5.41□□□□□ -1.54
KDM3B-209ENST00000542866 DCLK2Q8N568 766 aa5.41□□□□□ -1.54
KDM3B-209ENST00000542866 ANKRD36BP1Q96IX9 119 aa5.41□□□□□ -1.54
KDM3B-209ENST00000542866 SCYL1Q96KG9 808 aa5.41□□□□□ -1.54
KDM3B-209ENST00000542866 CIB1Q99828 191 aa5.41□□□□□ -1.54
KDM3B-209ENST00000542866 TMEM106CQ9BVX2 250 aa5.41□□□□□ -1.54
KDM3B-209ENST00000542866 OSBPL6Q9BZF3 934 aa5.41□□□□□ -1.54
KDM3B-209ENST00000542866 LHX5Q9H2C1 402 aa5.41□□□□□ -1.54
KDM3B-209ENST00000542866 EFCAB1Q9HAE3 211 aa5.41□□□□□ -1.54
KDM3B-209ENST00000542866 PCDH18Q9HCL0 1135 aa5.41□□□□□ -1.54
KDM3B-209ENST00000542866 ZNF302Q9NR11 478 aa5.41□□□□□ -1.54
KDM3B-209ENST00000542866 SNX15Q9NRS6 342 aa5.41□□□□□ -1.54
KDM3B-209ENST00000542866 FAIMQ9NVQ4 179 aa5.41□□□□□ -1.54
KDM3B-209ENST00000542866 MORF4L1Q9UBU8 362 aa5.41□□□□□ -1.54
KDM3B-209ENST00000542866 EBF1Q9UH73 591 aa5.41□□□□□ -1.54
KDM3B-209ENST00000542866 RNF11Q9Y3C5 154 aa5.41□□□□□ -1.54
KDM3B-209ENST00000542866 BCLAF3A2AJT9 711 aaKnown RBP5.41□□□□□ -1.54
KDM3B-209ENST00000542866 KPNA7A9QM74 516 aa5.41□□□□□ -1.54
KDM3B-209ENST00000542866 TRIM13O60858 407 aa5.41□□□□□ -1.54
KDM3B-209ENST00000542866 ATG7O95352 703 aa5.41□□□□□ -1.54
KDM3B-209ENST00000542866 H6PDO95479 791 aa5.41□□□□□ -1.54
KDM3B-209ENST00000542866 LTFP02788 710 aa5.41□□□□□ -1.54
KDM3B-209ENST00000542866 TGM2P21980 687 aa5.41□□□□□ -1.54
KDM3B-209ENST00000542866 IL4RP24394 825 aa5.41□□□□□ -1.54
KDM3B-209ENST00000542866 VARSP26640 1264 aaKnown RBP5.41□□□□□ -1.54
KDM3B-209ENST00000542866 STAT5BP51692 787 aa5.41□□□□□ -1.54
KDM3B-209ENST00000542866 AP3M2P53677 418 aa5.41□□□□□ -1.54
KDM3B-209ENST00000542866 NUP107P57740 925 aa5.41□□□□□ -1.54
KDM3B-209ENST00000542866 IRF9Q00978 393 aa5.41□□□□□ -1.54
KDM3B-209ENST00000542866 PTPN11Q06124 597 aaPredicted RBP5.41□□□□□ -1.54
KDM3B-209ENST00000542866 PTK2BQ14289 1009 aa5.41□□□□□ -1.54
KDM3B-209ENST00000542866 PIGGQ5H8A4 983 aa5.41□□□□□ -1.54
KDM3B-209ENST00000542866 SEL1L3Q68CR1 1132 aa5.41□□□□□ -1.54
KDM3B-209ENST00000542866 TRNP1Q6NT89 227 aa5.41□□□□□ -1.54
KDM3B-209ENST00000542866 BORAQ6PGQ7 559 aa5.41□□□□□ -1.54
KDM3B-209ENST00000542866 FAM183BPQ6ZVS7 135 aa5.41□□□□□ -1.54
KDM3B-209ENST00000542866 CROCCP3Q8IVE0 287 aa5.41□□□□□ -1.54
KDM3B-209ENST00000542866 ZNF786Q8N393 782 aa5.41□□□□□ -1.54
KDM3B-209ENST00000542866 RDM1Q8NG50 284 aa5.41□□□□□ -1.54
KDM3B-209ENST00000542866 RP9Q8TA86 221 aaKnown RBP5.41□□□□□ -1.54
KDM3B-209ENST00000542866 PPP1R14BQ96C90 147 aa5.41□□□□□ -1.54
KDM3B-209ENST00000542866 SNRNP25Q9BV90 132 aaKnown RBP5.41□□□□□ -1.54
KDM3B-209ENST00000542866 GATA5Q9BWX5 397 aaPredicted RBP5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms