RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 MRPL12P52815 198 aaKnown RBP4.17□□□□□ -1.74
SFSWAP-211ENST00000542813 RBP5P82980 135 aa4.17□□□□□ -1.74
SFSWAP-211ENST00000542813 KRTAP1-1Q07627 177 aa4.17□□□□□ -1.74
SFSWAP-211ENST00000542813 TFCP2Q12800 502 aa4.17□□□□□ -1.74
SFSWAP-211ENST00000542813 ALKBH1Q13686 389 aaKnown RBP4.17□□□□□ -1.74
SFSWAP-211ENST00000542813 ZNF667Q5HYK9 610 aa4.17□□□□□ -1.74
SFSWAP-211ENST00000542813 ERMARDQ5T6L9 678 aa4.17□□□□□ -1.74
SFSWAP-211ENST00000542813 KAZNQ674X7 775 aa4.17□□□□□ -1.74
SFSWAP-211ENST00000542813 PLBD1Q6P4A8 553 aa4.17□□□□□ -1.74
SFSWAP-211ENST00000542813 CCDC91Q7Z6B0 441 aa4.17□□□□□ -1.74
SFSWAP-211ENST00000542813 GPR149Q86SP6 731 aa4.17□□□□□ -1.74
SFSWAP-211ENST00000542813 CAND1Q86VP6 1230 aaKnown RBP4.17□□□□□ -1.74
SFSWAP-211ENST00000542813 DNAAF5Q86Y56 855 aa4.17□□□□□ -1.74
SFSWAP-211ENST00000542813 SCN4BQ8IWT1 228 aa4.17□□□□□ -1.74
SFSWAP-211ENST00000542813 ARHGAP12Q8IWW6 846 aa4.17□□□□□ -1.74
SFSWAP-211ENST00000542813 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.17□□□□□ -1.74
SFSWAP-211ENST00000542813 CARNMT1Q8N4J0 409 aa4.17□□□□□ -1.74
SFSWAP-211ENST00000542813 ZNF808Q8N4W9 903 aaPredicted RBP4.17□□□□□ -1.74
SFSWAP-211ENST00000542813 POC5Q8NA72 575 aa4.17□□□□□ -1.74
SFSWAP-211ENST00000542813 BEND2Q8NDZ0 799 aa4.17□□□□□ -1.74
SFSWAP-211ENST00000542813 Q8NFD4 153 aa4.17□□□□□ -1.74
SFSWAP-211ENST00000542813 CADM4Q8NFZ8 388 aa4.17□□□□□ -1.74
SFSWAP-211ENST00000542813 OR52L2PQ8NGH6 319 aa4.17□□□□□ -1.74
SFSWAP-211ENST00000542813 GLMPQ8WWB7 406 aa4.17□□□□□ -1.74
SFSWAP-211ENST00000542813 VPS33AQ96AX1 596 aa4.17□□□□□ -1.74
SFSWAP-211ENST00000542813 SLC22A18Q96BI1 424 aa4.17□□□□□ -1.74
SFSWAP-211ENST00000542813 PGAP3Q96FM1 320 aaPredicted RBP4.17□□□□□ -1.74
SFSWAP-211ENST00000542813 PLA2G12BQ9BX93 195 aa4.17□□□□□ -1.74
SFSWAP-211ENST00000542813 NPLQ9BXD5 320 aaPredicted RBP4.17□□□□□ -1.74
SFSWAP-211ENST00000542813 ACTRT3Q9BYD9 372 aa4.17□□□□□ -1.74
SFSWAP-211ENST00000542813 TPSD1Q9BZJ3 242 aa4.17□□□□□ -1.74
SFSWAP-211ENST00000542813 KLHL4Q9C0H6 718 aa4.17□□□□□ -1.74
SFSWAP-211ENST00000542813 C2orf40Q9H1Z8 148 aa4.17□□□□□ -1.74
SFSWAP-211ENST00000542813 CDCP1Q9H5V8 836 aa4.17□□□□□ -1.74
SFSWAP-211ENST00000542813 SCPEP1Q9HB40 452 aa4.17□□□□□ -1.74
SFSWAP-211ENST00000542813 GLOD4Q9HC38 313 aa4.17□□□□□ -1.74
SFSWAP-211ENST00000542813 CD248Q9HCU0 757 aa4.17□□□□□ -1.74
SFSWAP-211ENST00000542813 DECR2Q9NUI1 292 aa4.17□□□□□ -1.74
SFSWAP-211ENST00000542813 SPATS2LQ9NUQ6 558 aaKnown RBP4.17□□□□□ -1.74
SFSWAP-211ENST00000542813 GIMAP4Q9NUV9 329 aa4.17□□□□□ -1.74
SFSWAP-211ENST00000542813 MTMR4Q9NYA4 1195 aa4.17□□□□□ -1.74
SFSWAP-211ENST00000542813 IL1RAPL1Q9NZN1 696 aa4.17□□□□□ -1.74
SFSWAP-211ENST00000542813 C5AR2Q9P296 337 aa4.17□□□□□ -1.74
SFSWAP-211ENST00000542813 MARCH4Q9P2E8 410 aaPredicted RBP4.17□□□□□ -1.74
SFSWAP-211ENST00000542813 KLQ9UEF7 1012 aa4.17□□□□□ -1.74
SFSWAP-211ENST00000542813 KCNE5Q9UJ90 142 aa4.17□□□□□ -1.74
SFSWAP-211ENST00000542813 MKLN1Q9UL63 735 aa4.17□□□□□ -1.74
SFSWAP-211ENST00000542813 SH3BP1Q9Y3L3 701 aa4.17□□□□□ -1.74
SFSWAP-211ENST00000542813 FHOD3Q2V2M9 1422 aa4.17□□□□□ -1.74
SFSWAP-211ENST00000542813 FANCIQ9NVI1 1328 aa4.17□□□□□ -1.74
SFSWAP-211ENST00000542813 MAGI2Q86UL8 1455 aa4.17□□□□□ -1.74
SFSWAP-211ENST00000542813 FER1L4A9Z1Z3 1794 aa4.17□□□□□ -1.74
SFSWAP-211ENST00000542813 STRCQ7RTU9 1775 aa4.17□□□□□ -1.74
SFSWAP-211ENST00000542813 ABCA8O94911 1581 aa4.16□□□□□ -1.74
SFSWAP-211ENST00000542813 MROH6A6NGR9 719 aa4.16□□□□□ -1.74
SFSWAP-211ENST00000542813 GLOD5A6NK44 160 aa4.16□□□□□ -1.74
SFSWAP-211ENST00000542813 TAF4O00268 1085 aa4.16□□□□□ -1.74
SFSWAP-211ENST00000542813 TRIM24O15164 1050 aa4.16□□□□□ -1.74
SFSWAP-211ENST00000542813 CA12O43570 354 aa4.16□□□□□ -1.74
SFSWAP-211ENST00000542813 SPRY2O43597 315 aa4.16□□□□□ -1.74
SFSWAP-211ENST00000542813 ZFPL1O95159 310 aa4.16□□□□□ -1.74
SFSWAP-211ENST00000542813 ERBB2P04626 1255 aa4.16□□□□□ -1.74
SFSWAP-211ENST00000542813 ITGB3P05106 788 aa4.16□□□□□ -1.74
SFSWAP-211ENST00000542813 RB1P06400 928 aa4.16□□□□□ -1.74
SFSWAP-211ENST00000542813 CHRM4P08173 479 aa4.16□□□□□ -1.74
SFSWAP-211ENST00000542813 PDHA1P08559 390 aa4.16□□□□□ -1.74
SFSWAP-211ENST00000542813 CYP4B1P13584 511 aa4.16□□□□□ -1.74
SFSWAP-211ENST00000542813 ZNF37AP17032 561 aaPredicted RBP4.16□□□□□ -1.74
SFSWAP-211ENST00000542813 IFNAR1P17181 557 aa4.16□□□□□ -1.74
SFSWAP-211ENST00000542813 ADRA1DP25100 572 aa4.16□□□□□ -1.74
SFSWAP-211ENST00000542813 APOBEC3AP31941 199 aaPredicted RBP4.16□□□□□ -1.74
SFSWAP-211ENST00000542813 MCM5P33992 734 aa4.16□□□□□ -1.74
SFSWAP-211ENST00000542813 CNR2P34972 360 aa4.16□□□□□ -1.74
SFSWAP-211ENST00000542813 RPS19P39019 145 aaKnown RBP4.16□□□□□ -1.74
SFSWAP-211ENST00000542813 CAPZA2P47755 286 aa4.16□□□□□ -1.74
SFSWAP-211ENST00000542813 NRIP1P48552 1158 aa4.16□□□□□ -1.74
SFSWAP-211ENST00000542813 MMP14P50281 582 aa4.16□□□□□ -1.74
SFSWAP-211ENST00000542813 RRP1P56182 461 aaKnown RBP4.16□□□□□ -1.74
SFSWAP-211ENST00000542813 ABHD18Q0P651 414 aa4.16□□□□□ -1.74
SFSWAP-211ENST00000542813 BYSLQ13895 437 aaKnown RBP4.16□□□□□ -1.74
SFSWAP-211ENST00000542813 GEN1Q17RS7 908 aa4.16□□□□□ -1.74
SFSWAP-211ENST00000542813 DPCR1Q3MIW9 517 aa4.16□□□□□ -1.74
SFSWAP-211ENST00000542813 GXYLT1Q4G148 440 aa4.16□□□□□ -1.74
SFSWAP-211ENST00000542813 GKAP1Q5VSY0 366 aaPredicted RBP4.16□□□□□ -1.74
SFSWAP-211ENST00000542813 ADALQ6DHV7 355 aa4.16□□□□□ -1.74
SFSWAP-211ENST00000542813 DCLRE1AQ6PJP8 1040 aa4.16□□□□□ -1.74
SFSWAP-211ENST00000542813 ADGRA1Q86SQ6 560 aa4.16□□□□□ -1.74
SFSWAP-211ENST00000542813 ZNF761Q86XN6 746 aaPredicted RBP4.16□□□□□ -1.74
SFSWAP-211ENST00000542813 MAPKAPK5Q8IW41 473 aa4.16□□□□□ -1.74
SFSWAP-211ENST00000542813 KIAA2013Q8IYS2 634 aa4.16□□□□□ -1.74
SFSWAP-211ENST00000542813 ENDOVQ8N8Q3 282 aaKnown RBP4.16□□□□□ -1.74
SFSWAP-211ENST00000542813 TDRD5Q8NAT2 981 aaKnown RBP4.16□□□□□ -1.74
SFSWAP-211ENST00000542813 POGLUT1Q8NBL1 392 aa4.16□□□□□ -1.74
SFSWAP-211ENST00000542813 MAFAQ8NHW3 353 aaPredicted RBP4.16□□□□□ -1.74
SFSWAP-211ENST00000542813 MGARPQ8TDB4 240 aa4.16□□□□□ -1.74
SFSWAP-211ENST00000542813 PRPF31Q8WWY3 499 aaKnown RBP4.16□□□□□ -1.74
SFSWAP-211ENST00000542813 SOCS4Q8WXH5 440 aa4.16□□□□□ -1.74
SFSWAP-211ENST00000542813 GLG1Q92896 1179 aa4.16□□□□□ -1.74
SFSWAP-211ENST00000542813 RSPRY1Q96DX4 576 aa4.16□□□□□ -1.74
SFSWAP-211ENST00000542813 ZNF845Q96IR2 970 aaPredicted RBP4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms