RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 ZNF483Q8TF39 744 aaPredicted RBP5.31□□□□□ -1.56
ATPAF1-212ENST00000542495 DPF3Q92784 378 aa5.31□□□□□ -1.56
ATPAF1-212ENST00000542495 NTAN1Q96AB6 310 aa5.31□□□□□ -1.56
ATPAF1-212ENST00000542495 DCPSQ96C86 337 aaKnown RBP5.31□□□□□ -1.56
ATPAF1-212ENST00000542495 ZNF560Q96MR9 790 aa5.31□□□□□ -1.56
ATPAF1-212ENST00000542495 RBBP8Q99708 897 aa5.31□□□□□ -1.56
ATPAF1-212ENST00000542495 ECSITQ9BQ95 431 aa5.31□□□□□ -1.56
ATPAF1-212ENST00000542495 CCDC28BQ9BUN5 200 aa5.31□□□□□ -1.56
ATPAF1-212ENST00000542495 DUSP16Q9BY84 665 aa5.31□□□□□ -1.56
ATPAF1-212ENST00000542495 PRDM12Q9H4Q4 367 aa5.31□□□□□ -1.56
ATPAF1-212ENST00000542495 LRRC40Q9H9A6 602 aa5.31□□□□□ -1.56
ATPAF1-212ENST00000542495 S100A14Q9HCY8 104 aa5.31□□□□□ -1.56
ATPAF1-212ENST00000542495 CASS4Q9NQ75 786 aa5.31□□□□□ -1.56
ATPAF1-212ENST00000542495 PNPOQ9NVS9 261 aa5.31□□□□□ -1.56
ATPAF1-212ENST00000542495 NDE1Q9NXR1 346 aa5.31□□□□□ -1.56
ATPAF1-212ENST00000542495 DLGAP2Q9P1A6 1054 aa5.31□□□□□ -1.56
ATPAF1-212ENST00000542495 SCOCQ9UIL1 159 aa5.31□□□□□ -1.56
ATPAF1-212ENST00000542495 PPM1HQ9ULR3 514 aa5.31□□□□□ -1.56
ATPAF1-212ENST00000542495 PLXNB2O15031 1838 aa5.3□□□□□ -1.56
ATPAF1-212ENST00000542495 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.3□□□□□ -1.56
ATPAF1-212ENST00000542495 SMIM28A0A1B0GU29 152 aa5.3□□□□□ -1.56
ATPAF1-212ENST00000542495 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.3□□□□□ -1.56
ATPAF1-212ENST00000542495 SMIM35A0A1B0GVV1 85 aa5.3□□□□□ -1.56
ATPAF1-212ENST00000542495 MBLAC1A4D2B0 266 aaPredicted RBP5.3□□□□□ -1.56
ATPAF1-212ENST00000542495 ERI2A8K979 691 aaKnown RBP5.3□□□□□ -1.56
ATPAF1-212ENST00000542495 MEI4A8MW99 385 aa5.3□□□□□ -1.56
ATPAF1-212ENST00000542495 C9IYK1 514 aa5.3□□□□□ -1.56
ATPAF1-212ENST00000542495 SCAMP3O14828 347 aaKnown RBP5.3□□□□□ -1.56
ATPAF1-212ENST00000542495 CASQ2O14958 399 aaPredicted RBP5.3□□□□□ -1.56
ATPAF1-212ENST00000542495 NCAM2O15394 837 aa5.3□□□□□ -1.56
ATPAF1-212ENST00000542495 H2AFYO75367 372 aaKnown RBP5.3□□□□□ -1.56
ATPAF1-212ENST00000542495 USP1O94782 785 aa5.3□□□□□ -1.56
ATPAF1-212ENST00000542495 UPP2O95045 317 aa5.3□□□□□ -1.56
ATPAF1-212ENST00000542495 MYCP01106 439 aaPredicted RBP5.3□□□□□ -1.56
ATPAF1-212ENST00000542495 IGHA2P01877 340 aa5.3□□□□□ -1.56
ATPAF1-212ENST00000542495 FYNP06241 537 aa5.3□□□□□ -1.56
ATPAF1-212ENST00000542495 MMP3P08254 477 aa5.3□□□□□ -1.56
ATPAF1-212ENST00000542495 PDGFRBP09619 1106 aa5.3□□□□□ -1.56
ATPAF1-212ENST00000542495 ERVK-10P10266 1014 aa5.3□□□□□ -1.56
ATPAF1-212ENST00000542495 DARSP14868 501 aaKnown RBP5.3□□□□□ -1.56
ATPAF1-212ENST00000542495 CPA3P15088 417 aa5.3□□□□□ -1.56
ATPAF1-212ENST00000542495 SMPD1P17405 629 aa5.3□□□□□ -1.56
ATPAF1-212ENST00000542495 ITGAXP20702 1163 aa5.3□□□□□ -1.56
ATPAF1-212ENST00000542495 GLDCP23378 1020 aa5.3□□□□□ -1.56
ATPAF1-212ENST00000542495 PTPN3P26045 913 aa5.3□□□□□ -1.56
ATPAF1-212ENST00000542495 TYK2P29597 1187 aa5.3□□□□□ -1.56
ATPAF1-212ENST00000542495 AXLP30530 894 aa5.3□□□□□ -1.56
ATPAF1-212ENST00000542495 SPRP35270 261 aaPredicted RBP5.3□□□□□ -1.56
ATPAF1-212ENST00000542495 ADRA1BP35368 520 aa5.3□□□□□ -1.56
ATPAF1-212ENST00000542495 MLH1P40692 756 aa5.3□□□□□ -1.56
ATPAF1-212ENST00000542495 TAF6P49848 677 aa5.3□□□□□ -1.56
ATPAF1-212ENST00000542495 SERPINB8P50452 374 aa5.3□□□□□ -1.56
ATPAF1-212ENST00000542495 CACNA2D1P54289 1103 aa5.3□□□□□ -1.56
ATPAF1-212ENST00000542495 EPHA4P54764 986 aa5.3□□□□□ -1.56
ATPAF1-212ENST00000542495 GJA9P57773 515 aa5.3□□□□□ -1.56
ATPAF1-212ENST00000542495 RPL26P61254 145 aaKnown RBP5.3□□□□□ -1.56
ATPAF1-212ENST00000542495 XIAPP98170 497 aa5.3□□□□□ -1.56
ATPAF1-212ENST00000542495 SLC25A3Q00325 362 aa5.3□□□□□ -1.56
ATPAF1-212ENST00000542495 DSG1Q02413 1049 aa5.3□□□□□ -1.56
ATPAF1-212ENST00000542495 PPIDQ08752 370 aaKnown RBP5.3□□□□□ -1.56
ATPAF1-212ENST00000542495 ADIGQ0VDE8 80 aa5.3□□□□□ -1.56
ATPAF1-212ENST00000542495 CDC16Q13042 620 aa5.3□□□□□ -1.56
ATPAF1-212ENST00000542495 DUSP28Q4G0W2 176 aa5.3□□□□□ -1.56
ATPAF1-212ENST00000542495 INTS6LQ5JSJ4 861 aaKnown RBP5.3□□□□□ -1.56
ATPAF1-212ENST00000542495 GLRA4Q5JXX5 417 aa5.3□□□□□ -1.56
ATPAF1-212ENST00000542495 UBXN11Q5T124 520 aa5.3□□□□□ -1.56
ATPAF1-212ENST00000542495 ZNF618Q5T7W0 954 aa5.3□□□□□ -1.56
ATPAF1-212ENST00000542495 FOXB2Q5VYV0 432 aa5.3□□□□□ -1.56
ATPAF1-212ENST00000542495 PDPK2PQ6A1A2 396 aa5.3□□□□□ -1.56
ATPAF1-212ENST00000542495 IZUMO2Q6UXV1 221 aa5.3□□□□□ -1.56
ATPAF1-212ENST00000542495 MOB2Q70IA6 237 aa5.3□□□□□ -1.56
ATPAF1-212ENST00000542495 CATSPER4Q7RTX7 472 aa5.3□□□□□ -1.56
ATPAF1-212ENST00000542495 DHDDSQ86SQ9 333 aa5.3□□□□□ -1.56
ATPAF1-212ENST00000542495 OSTM1Q86WC4 334 aa5.3□□□□□ -1.56
ATPAF1-212ENST00000542495 RASSF3Q86WH2 238 aa5.3□□□□□ -1.56
ATPAF1-212ENST00000542495 PDSS2Q86YH6 399 aa5.3□□□□□ -1.56
ATPAF1-212ENST00000542495 PLD6Q8N2A8 252 aaKnown RBP5.3□□□□□ -1.56
ATPAF1-212ENST00000542495 DCLK2Q8N568 766 aa5.3□□□□□ -1.56
ATPAF1-212ENST00000542495 TOP6BLQ8N6T0 577 aa5.3□□□□□ -1.56
ATPAF1-212ENST00000542495 RNF169Q8NCN4 708 aa5.3□□□□□ -1.56
ATPAF1-212ENST00000542495 B3GALNT2Q8NCR0 500 aa5.3□□□□□ -1.56
ATPAF1-212ENST00000542495 GSTCDQ8NEC7 633 aa5.3□□□□□ -1.56
ATPAF1-212ENST00000542495 APPL2Q8NEU8 664 aa5.3□□□□□ -1.56
ATPAF1-212ENST00000542495 GPRC5AQ8NFJ5 357 aa5.3□□□□□ -1.56
ATPAF1-212ENST00000542495 PPP4R1Q8TF05 950 aa5.3□□□□□ -1.56
ATPAF1-212ENST00000542495 ZFAND2BQ8WV99 257 aa5.3□□□□□ -1.56
ATPAF1-212ENST00000542495 NDRG1Q92597 394 aaKnown RBP5.3□□□□□ -1.56
ATPAF1-212ENST00000542495 JADE3Q92613 823 aa5.3□□□□□ -1.56
ATPAF1-212ENST00000542495 WNT8BQ93098 351 aa5.3□□□□□ -1.56
ATPAF1-212ENST00000542495 PPP2R3CQ969Q6 453 aa5.3□□□□□ -1.56
ATPAF1-212ENST00000542495 OPTNQ96CV9 577 aa5.3□□□□□ -1.56
ATPAF1-212ENST00000542495 PGBD4Q96DM1 585 aa5.3□□□□□ -1.56
ATPAF1-212ENST00000542495 CMTM5Q96DZ9 223 aa5.3□□□□□ -1.56
ATPAF1-212ENST00000542495 CDCA5Q96FF9 252 aa5.3□□□□□ -1.56
ATPAF1-212ENST00000542495 TNIP3Q96KP6 325 aa5.3□□□□□ -1.56
ATPAF1-212ENST00000542495 TRAPPC9Q96Q05 1148 aa5.3□□□□□ -1.56
ATPAF1-212ENST00000542495 FERMT1Q9BQL6 677 aa5.3□□□□□ -1.56
ATPAF1-212ENST00000542495 YIPF3Q9GZM5 350 aa5.3□□□□□ -1.56
ATPAF1-212ENST00000542495 SLC6A16Q9GZN6 736 aa5.3□□□□□ -1.56
ATPAF1-212ENST00000542495 DNAI2Q9GZS0 605 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms