RNA–Protein interactions for RNA: ENST00000542113.1

NKRF-204, Transcript of NFKB repressing factor, humanhuman

TSL 3 BASIC

Gene NKRF, Length 3,351 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKRF-204ENST00000542113 SMIM35A0A1B0GVV1 85 aa6.91□□□□□ -1.3
NKRF-204ENST00000542113 E9PBE3 544 aa6.91□□□□□ -1.3
NKRF-204ENST00000542113 G3V2L1 256 aa6.91□□□□□ -1.3
NKRF-204ENST00000542113 MATN2O00339 956 aa6.91□□□□□ -1.3
NKRF-204ENST00000542113 TXNDC9O14530 226 aa6.91□□□□□ -1.3
NKRF-204ENST00000542113 PPEF2O14830 753 aa6.91□□□□□ -1.3
NKRF-204ENST00000542113 KLHL41O60662 606 aa6.91□□□□□ -1.3
NKRF-204ENST00000542113 PRKCGP05129 697 aa6.91□□□□□ -1.3
NKRF-204ENST00000542113 ERCC2P18074 760 aa6.91□□□□□ -1.3
NKRF-204ENST00000542113 PAMP19021 973 aa6.91□□□□□ -1.3
NKRF-204ENST00000542113 CYP2B6P20813 491 aa6.91□□□□□ -1.3
NKRF-204ENST00000542113 HOXA11P31270 313 aaPredicted RBP6.91□□□□□ -1.3
NKRF-204ENST00000542113 CYP2C18P33260 490 aa6.91□□□□□ -1.3
NKRF-204ENST00000542113 RGS2P41220 211 aa6.91□□□□□ -1.3
NKRF-204ENST00000542113 ALDH1A3P47895 512 aa6.91□□□□□ -1.3
NKRF-204ENST00000542113 NUDT2P50583 147 aa6.91□□□□□ -1.3
NKRF-204ENST00000542113 FLOT2Q14254 428 aa6.91□□□□□ -1.3
NKRF-204ENST00000542113 PDK3Q15120 406 aa6.91□□□□□ -1.3
NKRF-204ENST00000542113 CNGA3Q16281 694 aa6.91□□□□□ -1.3
NKRF-204ENST00000542113 CCDC117Q8IWD4 279 aaPredicted RBP6.91□□□□□ -1.3
NKRF-204ENST00000542113 TMEM130Q8N3G9 435 aa6.91□□□□□ -1.3
NKRF-204ENST00000542113 MARVELD2Q8N4S9 558 aa6.91□□□□□ -1.3
NKRF-204ENST00000542113 RIN3Q8TB24 985 aa6.91□□□□□ -1.3
NKRF-204ENST00000542113 CNKSR2Q8WXI2 1034 aa6.91□□□□□ -1.3
NKRF-204ENST00000542113 AZIN2Q96A70 460 aa6.91□□□□□ -1.3
NKRF-204ENST00000542113 C18orf25Q96B23 403 aaPredicted RBP6.91□□□□□ -1.3
NKRF-204ENST00000542113 PGAP3Q96FM1 320 aaPredicted RBP6.91□□□□□ -1.3
NKRF-204ENST00000542113 MED10Q9BTT4 135 aa6.91□□□□□ -1.3
NKRF-204ENST00000542113 GATA5Q9BWX5 397 aaPredicted RBP6.91□□□□□ -1.3
NKRF-204ENST00000542113 MRM3Q9HC36 420 aaKnown RBP6.91□□□□□ -1.3
NKRF-204ENST00000542113 SLC17A6Q9P2U8 582 aa6.91□□□□□ -1.3
NKRF-204ENST00000542113 LOC100653049A0A140TA62 436 aa6.91□□□□□ -1.3
NKRF-204ENST00000542113 ZCWPW2A0A1B0GU75 182 aa6.91□□□□□ -1.3
NKRF-204ENST00000542113 DENRO43583 198 aaKnown RBP6.91□□□□□ -1.3
NKRF-204ENST00000542113 KRT34O76011 436 aa6.91□□□□□ -1.3
NKRF-204ENST00000542113 DARSP14868 501 aaKnown RBP6.91□□□□□ -1.3
NKRF-204ENST00000542113 PEX2P28328 305 aa6.91□□□□□ -1.3
NKRF-204ENST00000542113 HTR7P34969 479 aa6.91□□□□□ -1.3
NKRF-204ENST00000542113 NME3Q13232 169 aa6.91□□□□□ -1.3
NKRF-204ENST00000542113 ART3Q13508 389 aa6.91□□□□□ -1.3
NKRF-204ENST00000542113 KIZQ2M2Z5 673 aa6.91□□□□□ -1.3
NKRF-204ENST00000542113 Q3C1V9 767 aa6.91□□□□□ -1.3
NKRF-204ENST00000542113 ZNF792Q3KQV3 632 aa6.91□□□□□ -1.3
NKRF-204ENST00000542113 HPS6Q86YV9 775 aa6.91□□□□□ -1.3
NKRF-204ENST00000542113 GPRC5AQ8NFJ5 357 aa6.91□□□□□ -1.3
NKRF-204ENST00000542113 CCDC126Q96EE4 140 aa6.91□□□□□ -1.3
NKRF-204ENST00000542113 SCYL1Q96KG9 808 aa6.91□□□□□ -1.3
NKRF-204ENST00000542113 UBE2OQ9C0C9 1292 aaKnown RBP6.91□□□□□ -1.3
NKRF-204ENST00000542113 ADAMTS10Q9H324 1103 aa6.91□□□□□ -1.3
NKRF-204ENST00000542113 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.91□□□□□ -1.3
NKRF-204ENST00000542113 NME7Q9Y5B8 376 aa6.91□□□□□ -1.3
NKRF-204ENST00000542113 PAPPA2Q9BXP8 1791 aa6.91□□□□□ -1.3
NKRF-204ENST00000542113 SMIM28A0A1B0GU29 152 aa6.91□□□□□ -1.3
NKRF-204ENST00000542113 F5H423 210 aaPredicted RBP6.91□□□□□ -1.3
NKRF-204ENST00000542113 KCNK1O00180 336 aa6.91□□□□□ -1.3
NKRF-204ENST00000542113 NPHS1O60500 1241 aa6.91□□□□□ -1.3
NKRF-204ENST00000542113 RNASEH1O60930 286 aaKnown RBP6.91□□□□□ -1.3
NKRF-204ENST00000542113 ANXA9O76027 345 aa6.91□□□□□ -1.3
NKRF-204ENST00000542113 TNFAIP8O95379 198 aa6.91□□□□□ -1.3
NKRF-204ENST00000542113 STAMBPO95630 424 aa6.91□□□□□ -1.3
NKRF-204ENST00000542113 PTPN1P18031 435 aaKnown RBP6.91□□□□□ -1.3
NKRF-204ENST00000542113 ME2P23368 584 aa6.91□□□□□ -1.3
NKRF-204ENST00000542113 AQP4P55087 323 aa6.91□□□□□ -1.3
NKRF-204ENST00000542113 GALNT2Q10471 571 aa6.91□□□□□ -1.3
NKRF-204ENST00000542113 TTLL12Q14166 644 aaPredicted RBP6.91□□□□□ -1.3
NKRF-204ENST00000542113 USP10Q14694 798 aaKnown RBP6.91□□□□□ -1.3
NKRF-204ENST00000542113 CNPY1Q3B7I2 92 aa6.91□□□□□ -1.3
NKRF-204ENST00000542113 DUSP28Q4G0W2 176 aa6.91□□□□□ -1.3
NKRF-204ENST00000542113 SFT2D3Q587I9 215 aa6.91□□□□□ -1.3
NKRF-204ENST00000542113 XKR4Q5GH76 650 aa6.91□□□□□ -1.3
NKRF-204ENST00000542113 GLRA4Q5JXX5 417 aa6.91□□□□□ -1.3
NKRF-204ENST00000542113 TCHHL1Q5QJ38 904 aaPredicted RBP6.91□□□□□ -1.3
NKRF-204ENST00000542113 FAM182AQ5T1J6 154 aa6.91□□□□□ -1.3
NKRF-204ENST00000542113 KCTD11Q693B1 232 aa6.91□□□□□ -1.3
NKRF-204ENST00000542113 PIWIL4Q7Z3Z4 852 aaKnown RBP6.91□□□□□ -1.3
NKRF-204ENST00000542113 SNX32Q86XE0 403 aa6.91□□□□□ -1.3
NKRF-204ENST00000542113 TMEM86AQ8N2M4 240 aa6.91□□□□□ -1.3
NKRF-204ENST00000542113 PHTF2Q8N3S3 785 aa6.91□□□□□ -1.3
NKRF-204ENST00000542113 OR6J1Q8NGC5 347 aa6.91□□□□□ -1.3
NKRF-204ENST00000542113 DDI1Q8WTU0 396 aa6.91□□□□□ -1.3
NKRF-204ENST00000542113 TOP1MTQ969P6 601 aa6.91□□□□□ -1.3
NKRF-204ENST00000542113 FCRL3Q96P31 734 aaPredicted RBP6.91□□□□□ -1.3
NKRF-204ENST00000542113 LENG8Q96PV6 779 aaPredicted RBP6.91□□□□□ -1.3
NKRF-204ENST00000542113 SUDS3Q9H7L9 328 aaPredicted RBP6.91□□□□□ -1.3
NKRF-204ENST00000542113 SLC38A7Q9NVC3 462 aa6.91□□□□□ -1.3
NKRF-204ENST00000542113 ADAMTS6Q9UKP5 1117 aa6.91□□□□□ -1.3
NKRF-204ENST00000542113 TBC1D30Q9Y2I9 924 aa6.91□□□□□ -1.3
NKRF-204ENST00000542113 MFHAS1Q9Y4C4 1052 aa6.91□□□□□ -1.3
NKRF-204ENST00000542113 KAT6AQ92794 2004 aa6.91□□□□□ -1.3
NKRF-204ENST00000542113 SYNJ2BP-COX16A0A087WUM0 186 aa6.9□□□□□ -1.3
NKRF-204ENST00000542113 A0A087X1B8 175 aa6.9□□□□□ -1.3
NKRF-204ENST00000542113 C15orf38-AP3S2A0A0A6YYH1 394 aa6.9□□□□□ -1.3
NKRF-204ENST00000542113 ZBTB14O43829 449 aa6.9□□□□□ -1.3
NKRF-204ENST00000542113 ATP9BO43861 1147 aa6.9□□□□□ -1.3
NKRF-204ENST00000542113 RTN3O95197 1032 aaPredicted RBP6.9□□□□□ -1.3
NKRF-204ENST00000542113 MMP3P08254 477 aa6.9□□□□□ -1.3
NKRF-204ENST00000542113 LHX1P48742 406 aa6.9□□□□□ -1.3
NKRF-204ENST00000542113 RAB27AP51159 221 aa6.9□□□□□ -1.3
NKRF-204ENST00000542113 TKTL1P51854 596 aa6.9□□□□□ -1.3
NKRF-204ENST00000542113 USP4Q13107 963 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms