RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 PGM5Q15124 567 aa3.54□□□□□ -1.84
USP28-210ENST00000542033 RABEP1Q15276 862 aa3.54□□□□□ -1.84
USP28-210ENST00000542033 RUNDC3AQ59EK9 446 aa3.54□□□□□ -1.84
USP28-210ENST00000542033 C10orf25Q5T742 122 aa3.54□□□□□ -1.84
USP28-210ENST00000542033 LRCH2Q5VUJ6 765 aa3.54□□□□□ -1.84
USP28-210ENST00000542033 PAPD7Q5XG87 772 aaKnown RBP3.54□□□□□ -1.84
USP28-210ENST00000542033 KIAA1324Q6UXG2 1013 aaKnown RBP3.54□□□□□ -1.84
USP28-210ENST00000542033 C4orf50Q6ZRC1 276 aa3.54□□□□□ -1.84
USP28-210ENST00000542033 MDGA2Q7Z553 956 aa3.54□□□□□ -1.84
USP28-210ENST00000542033 TMEM200AQ86VY9 491 aa3.54□□□□□ -1.84
USP28-210ENST00000542033 KLBQ86Z14 1044 aa3.54□□□□□ -1.84
USP28-210ENST00000542033 HERC6Q8IVU3 1022 aa3.54□□□□□ -1.84
USP28-210ENST00000542033 PAQR4Q8N4S7 273 aaPredicted RBP3.54□□□□□ -1.84
USP28-210ENST00000542033 TMEM57Q8N5G2 664 aa3.54□□□□□ -1.84
USP28-210ENST00000542033 PDILTQ8N807 584 aa3.54□□□□□ -1.84
USP28-210ENST00000542033 PTGR2Q8N8N7 351 aaPredicted RBP3.54□□□□□ -1.84
USP28-210ENST00000542033 CCDC89Q8N998 374 aa3.54□□□□□ -1.84
USP28-210ENST00000542033 C16orf52Q8NHV5 167 aa3.54□□□□□ -1.84
USP28-210ENST00000542033 KCNJ9Q92806 393 aa3.54□□□□□ -1.84
USP28-210ENST00000542033 ATP2A3Q93084 1043 aa3.54□□□□□ -1.84
USP28-210ENST00000542033 FCRL4Q96PJ5 515 aa3.54□□□□□ -1.84
USP28-210ENST00000542033 TRIM31Q9BZY9 425 aa3.54□□□□□ -1.84
USP28-210ENST00000542033 JMJD4Q9H9V9 463 aa3.54□□□□□ -1.84
USP28-210ENST00000542033 SMC4Q9NTJ3 1288 aa3.54□□□□□ -1.84
USP28-210ENST00000542033 RBM28Q9NW13 759 aaKnown RBP3.54□□□□□ -1.84
USP28-210ENST00000542033 ARL15Q9NXU5 204 aa3.54□□□□□ -1.84
USP28-210ENST00000542033 GGA3Q9NZ52 723 aa3.54□□□□□ -1.84
USP28-210ENST00000542033 RAI14Q9P0K7 980 aa3.54□□□□□ -1.84
USP28-210ENST00000542033 NRBP1Q9UHY1 535 aa3.54□□□□□ -1.84
USP28-210ENST00000542033 FEM1BQ9UK73 627 aa3.54□□□□□ -1.84
USP28-210ENST00000542033 RABGAP1Q9Y3P9 1069 aa3.54□□□□□ -1.84
USP28-210ENST00000542033 ZMYM2Q9UBW7 1377 aa3.53□□□□□ -1.84
USP28-210ENST00000542033 ZNF521Q96K83 1311 aa3.53□□□□□ -1.84
USP28-210ENST00000542033 CXorf65A6NEN9 183 aa3.53□□□□□ -1.84
USP28-210ENST00000542033 FAM90A20PA6NIJ5 464 aa3.53□□□□□ -1.84
USP28-210ENST00000542033 A6NLC8 198 aa3.53□□□□□ -1.84
USP28-210ENST00000542033 B4E171 279 aa3.53□□□□□ -1.84
USP28-210ENST00000542033 RHODO00212 210 aa3.53□□□□□ -1.84
USP28-210ENST00000542033 TK1P04183 234 aa3.53□□□□□ -1.84
USP28-210ENST00000542033 CYP21A2P08686 494 aa3.53□□□□□ -1.84
USP28-210ENST00000542033 IFIT1P09914 478 aaKnown RBP3.53□□□□□ -1.84
USP28-210ENST00000542033 PKMP14618 531 aaKnown RBP3.53□□□□□ -1.84
USP28-210ENST00000542033 CHN1P15882 459 aa3.53□□□□□ -1.84
USP28-210ENST00000542033 CAPN3P20807 821 aa3.53□□□□□ -1.84
USP28-210ENST00000542033 PRPH2P23942 346 aa3.53□□□□□ -1.84
USP28-210ENST00000542033 GSTM2P28161 218 aa3.53□□□□□ -1.84
USP28-210ENST00000542033 CHRNA5P30532 468 aa3.53□□□□□ -1.84
USP28-210ENST00000542033 PNPLA4P41247 253 aa3.53□□□□□ -1.84
USP28-210ENST00000542033 TSPAN7P41732 249 aa3.53□□□□□ -1.84
USP28-210ENST00000542033 LAMB3Q13751 1172 aa3.53□□□□□ -1.84
USP28-210ENST00000542033 DLGAP5Q15398 846 aa3.53□□□□□ -1.84
USP28-210ENST00000542033 RBMS2Q15434 407 aaKnown RBP3.53□□□□□ -1.84
USP28-210ENST00000542033 LRRC24Q50LG9 513 aa3.53□□□□□ -1.84
USP28-210ENST00000542033 ARL13AQ5H913 290 aaPredicted RBP3.53□□□□□ -1.84
USP28-210ENST00000542033 EPHA10Q5JZY3 1008 aa3.53□□□□□ -1.84
USP28-210ENST00000542033 ISM2Q6H9L7 571 aa3.53□□□□□ -1.84
USP28-210ENST00000542033 CFAP161Q6P656 301 aa3.53□□□□□ -1.84
USP28-210ENST00000542033 DSTYKQ6XUX3 929 aa3.53□□□□□ -1.84
USP28-210ENST00000542033 RASGRP2Q7LDG7 609 aa3.53□□□□□ -1.84
USP28-210ENST00000542033 CPOQ8IVL8 374 aa3.53□□□□□ -1.84
USP28-210ENST00000542033 VPS52Q8N1B4 723 aa3.53□□□□□ -1.84
USP28-210ENST00000542033 TSPYL6Q8N831 410 aa3.53□□□□□ -1.84
USP28-210ENST00000542033 SLC44A5Q8NCS7 719 aa3.53□□□□□ -1.84
USP28-210ENST00000542033 CEP70Q8NHQ1 597 aa3.53□□□□□ -1.84
USP28-210ENST00000542033 COQ8BQ96D53 544 aa3.53□□□□□ -1.84
USP28-210ENST00000542033 ZBTB10Q96DT7 871 aa3.53□□□□□ -1.84
USP28-210ENST00000542033 KTI12Q96EK9 354 aaPredicted RBP3.53□□□□□ -1.84
USP28-210ENST00000542033 HMCESQ96FZ2 354 aa3.53□□□□□ -1.84
USP28-210ENST00000542033 CLMNQ96JQ2 1002 aa3.53□□□□□ -1.84
USP28-210ENST00000542033 MAELQ96JY0 434 aaKnown RBP3.53□□□□□ -1.84
USP28-210ENST00000542033 NEUROD6Q96NK8 337 aa3.53□□□□□ -1.84
USP28-210ENST00000542033 PIMREGQ9BSJ6 248 aa3.53□□□□□ -1.84
USP28-210ENST00000542033 TWSG1Q9GZX9 223 aa3.53□□□□□ -1.84
USP28-210ENST00000542033 CLPBQ9H078 707 aa3.53□□□□□ -1.84
USP28-210ENST00000542033 PLEKHA2Q9HB19 425 aa3.53□□□□□ -1.84
USP28-210ENST00000542033 TXNRD2Q9NNW7 524 aa3.53□□□□□ -1.84
USP28-210ENST00000542033 TBC1D22BQ9NU19 505 aa3.53□□□□□ -1.84
USP28-210ENST00000542033 ELOVL5Q9NYP7 299 aa3.53□□□□□ -1.84
USP28-210ENST00000542033 UTS2RQ9UKP6 389 aa3.53□□□□□ -1.84
USP28-210ENST00000542033 AGO2Q9UKV8 859 aaKnown RBP3.53□□□□□ -1.84
USP28-210ENST00000542033 RCE1Q9Y256 329 aa3.53□□□□□ -1.84
USP28-210ENST00000542033 DTX4Q9Y2E6 619 aa3.53□□□□□ -1.84
USP28-210ENST00000542033 DERAQ9Y315 318 aa3.53□□□□□ -1.84
USP28-210ENST00000542033 RRP7AQ9Y3A4 280 aaKnown RBP3.53□□□□□ -1.84
USP28-210ENST00000542033 PKP3Q9Y446 797 aa3.53□□□□□ -1.84
USP28-210ENST00000542033 B9A039 149 aa3.52□□□□□ -1.85
USP28-210ENST00000542033 SOCS2O14508 198 aa3.52□□□□□ -1.85
USP28-210ENST00000542033 SYN3O14994 580 aa3.52□□□□□ -1.85
USP28-210ENST00000542033 CNOT3O75175 753 aaKnown RBP3.52□□□□□ -1.85
USP28-210ENST00000542033 DDX58O95786 925 aaKnown RBP3.52□□□□□ -1.85
USP28-210ENST00000542033 HLA-DQA2P01906 255 aa3.52□□□□□ -1.85
USP28-210ENST00000542033 TMEM191BP0C7N4 346 aa3.52□□□□□ -1.85
USP28-210ENST00000542033 TNNT1P13805 278 aa3.52□□□□□ -1.85
USP28-210ENST00000542033 LIFRP42702 1097 aa3.52□□□□□ -1.85
USP28-210ENST00000542033 RPS6KA3P51812 740 aa3.52□□□□□ -1.85
USP28-210ENST00000542033 UBE3AQ05086 875 aa3.52□□□□□ -1.85
USP28-210ENST00000542033 DMTNQ08495 405 aa3.52□□□□□ -1.85
USP28-210ENST00000542033 GOLGA8FQ08AF8 430 aa3.52□□□□□ -1.85
USP28-210ENST00000542033 MAPK7Q13164 816 aa3.52□□□□□ -1.85
USP28-210ENST00000542033 PRKG2Q13237 762 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms