RNA–Protein interactions for RNA: ENST00000541817.5

CHFR-220, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-220ENST00000541817 SDK2Q58EX2 2172 aa10.08□□□□□ -0.8
CHFR-220ENST00000541817 FAM237AA0A1B0GTK4 181 aa10.08□□□□□ -0.8
CHFR-220ENST00000541817 K7EM74 188 aa10.08□□□□□ -0.8
CHFR-220ENST00000541817 NRDCO43847 1150 aa10.08□□□□□ -0.8
CHFR-220ENST00000541817 RNGTTO60942 597 aaKnown RBP10.08□□□□□ -0.8
CHFR-220ENST00000541817 TCEA3O75764 348 aa10.08□□□□□ -0.8
CHFR-220ENST00000541817 ADH1BP00325 375 aa10.08□□□□□ -0.8
CHFR-220ENST00000541817 PRKCGP05129 697 aa10.08□□□□□ -0.8
CHFR-220ENST00000541817 MZF1P28698 734 aaPredicted RBP10.08□□□□□ -0.8
CHFR-220ENST00000541817 ABCD1P33897 745 aa10.08□□□□□ -0.8
CHFR-220ENST00000541817 CCL7P80098 99 aa10.08□□□□□ -0.8
CHFR-220ENST00000541817 C1orf61Q13536 156 aa10.08□□□□□ -0.8
CHFR-220ENST00000541817 SETMARQ53H47 684 aaPredicted RBP10.08□□□□□ -0.8
CHFR-220ENST00000541817 RESP18Q5W5W9 173 aa10.08□□□□□ -0.8
CHFR-220ENST00000541817 RSRC2Q7L4I2 434 aaKnown RBP10.08□□□□□ -0.8
CHFR-220ENST00000541817 MAMDC2Q7Z304 686 aaPredicted RBP10.08□□□□□ -0.8
CHFR-220ENST00000541817 MTERF4Q7Z6M4 381 aaKnown RBP10.08□□□□□ -0.8
CHFR-220ENST00000541817 ZC3H18Q86VM9 953 aaKnown RBP10.08□□□□□ -0.8
CHFR-220ENST00000541817 WDR49Q8IV35 697 aa10.08□□□□□ -0.8
CHFR-220ENST00000541817 SLC35F3Q8IY50 421 aa10.08□□□□□ -0.8
CHFR-220ENST00000541817 MYRIPQ8NFW9 859 aa10.08□□□□□ -0.8
CHFR-220ENST00000541817 TPCN2Q8NHX9 752 aa10.08□□□□□ -0.8
CHFR-220ENST00000541817 LMX1AQ8TE12 382 aa10.08□□□□□ -0.8
CHFR-220ENST00000541817 PTPRN2Q92932 1015 aa10.08□□□□□ -0.8
CHFR-220ENST00000541817 HVCN1Q96D96 273 aa10.08□□□□□ -0.8
CHFR-220ENST00000541817 CCDC34Q96HJ3 373 aa10.08□□□□□ -0.8
CHFR-220ENST00000541817 XYLT2Q9H1B5 865 aa10.08□□□□□ -0.8
CHFR-220ENST00000541817 CASS4Q9NQ75 786 aa10.08□□□□□ -0.8
CHFR-220ENST00000541817 RABGEF1Q9UJ41 708 aa10.08□□□□□ -0.8
CHFR-220ENST00000541817 ACSL6Q9UKU0 697 aa10.08□□□□□ -0.8
CHFR-220ENST00000541817 SARDHQ9UL12 918 aa10.08□□□□□ -0.8
CHFR-220ENST00000541817 PYCARDQ9ULZ3 195 aa10.08□□□□□ -0.8
CHFR-220ENST00000541817 ERVW-1Q9UQF0 538 aa10.08□□□□□ -0.8
CHFR-220ENST00000541817 PCDHB11Q9Y5F2 797 aa10.08□□□□□ -0.8
CHFR-220ENST00000541817 WIPF3A6NGB9 483 aa10.07□□□□□ -0.8
CHFR-220ENST00000541817 PRR19A6NJB7 356 aa10.07□□□□□ -0.8
CHFR-220ENST00000541817 ZNF233A6NK53 670 aa10.07□□□□□ -0.8
CHFR-220ENST00000541817 C9orf172C9J069 976 aa10.07□□□□□ -0.8
CHFR-220ENST00000541817 NVLO15381 856 aaKnown RBP10.07□□□□□ -0.8
CHFR-220ENST00000541817 CBFA2T2O43439 604 aa10.07□□□□□ -0.8
CHFR-220ENST00000541817 PLRG1O43660 514 aaKnown RBP10.07□□□□□ -0.8
CHFR-220ENST00000541817 VPS4BO75351 444 aa10.07□□□□□ -0.8
CHFR-220ENST00000541817 FAM163BP0C2L3 166 aa10.07□□□□□ -0.8
CHFR-220ENST00000541817 FAM200BP0CF97 657 aa10.07□□□□□ -0.8
CHFR-220ENST00000541817 STK19P49842 368 aaPredicted RBP10.07□□□□□ -0.8
CHFR-220ENST00000541817 KIF11P52732 1056 aa10.07□□□□□ -0.8
CHFR-220ENST00000541817 NDST1P52848 882 aa10.07□□□□□ -0.8
CHFR-220ENST00000541817 GSDMDP57764 484 aa10.07□□□□□ -0.8
CHFR-220ENST00000541817 PDE4CQ08493 712 aa10.07□□□□□ -0.8
CHFR-220ENST00000541817 CNTN1Q12860 1018 aa10.07□□□□□ -0.8
CHFR-220ENST00000541817 TRPC3Q13507 836 aa10.07□□□□□ -0.8
CHFR-220ENST00000541817 GCNT7Q6ZNI0 430 aa10.07□□□□□ -0.8
CHFR-220ENST00000541817 Q6ZSR6 202 aa10.07□□□□□ -0.8
CHFR-220ENST00000541817 PTAR1Q7Z6K3 402 aaPredicted RBP10.07□□□□□ -0.8
CHFR-220ENST00000541817 TADA2BQ86TJ2 420 aa10.07□□□□□ -0.8
CHFR-220ENST00000541817 TRIM69Q86WT6 500 aa10.07□□□□□ -0.8
CHFR-220ENST00000541817 ELOA2Q8IYF1 753 aaPredicted RBP10.07□□□□□ -0.8
CHFR-220ENST00000541817 TMEM145Q8NBT3 493 aa10.07□□□□□ -0.8
CHFR-220ENST00000541817 TTC17Q96AE7 1141 aa10.07□□□□□ -0.8
CHFR-220ENST00000541817 CCDC127Q96BQ5 260 aa10.07□□□□□ -0.8
CHFR-220ENST00000541817 MYEOVQ96EZ4 313 aa10.07□□□□□ -0.8
CHFR-220ENST00000541817 CALML4Q96GE6 196 aa10.07□□□□□ -0.8
CHFR-220ENST00000541817 ABHD17AQ96GS6 310 aa10.07□□□□□ -0.8
CHFR-220ENST00000541817 TNIP3Q96KP6 325 aa10.07□□□□□ -0.8
CHFR-220ENST00000541817 LMLNQ96KR4 655 aa10.07□□□□□ -0.8
CHFR-220ENST00000541817 CGRRF1Q99675 332 aa10.07□□□□□ -0.8
CHFR-220ENST00000541817 TCEAL2Q9H3H9 227 aaPredicted RBP10.07□□□□□ -0.8
CHFR-220ENST00000541817 IMPACTQ9P2X3 320 aa10.07□□□□□ -0.8
CHFR-220ENST00000541817 SFMBT1Q9UHJ3 866 aa10.07□□□□□ -0.8
CHFR-220ENST00000541817 VPS4AQ9UN37 437 aa10.07□□□□□ -0.8
CHFR-220ENST00000541817 LOXL2Q9Y4K0 774 aa10.07□□□□□ -0.8
CHFR-220ENST00000541817 A0A087X0B3 334 aa10.06□□□□□ -0.8
CHFR-220ENST00000541817 EDDM13A0A1B0GTR0 161 aa10.06□□□□□ -0.8
CHFR-220ENST00000541817 A0A1W2PQU0 124 aa10.06□□□□□ -0.8
CHFR-220ENST00000541817 TARSL2A2RTX5 802 aaKnown RBP10.06□□□□□ -0.8
CHFR-220ENST00000541817 NTN3O00634 580 aaPredicted RBP10.06□□□□□ -0.8
CHFR-220ENST00000541817 AQP9O43315 295 aa10.06□□□□□ -0.8
CHFR-220ENST00000541817 BMP15O95972 392 aa10.06□□□□□ -0.8
CHFR-220ENST00000541817 PRKAR1AP10644 381 aa10.06□□□□□ -0.8
CHFR-220ENST00000541817 LIFP15018 202 aa10.06□□□□□ -0.8
CHFR-220ENST00000541817 SLC6A4P31645 630 aa10.06□□□□□ -0.8
CHFR-220ENST00000541817 TAS2R38P59533 333 aa10.06□□□□□ -0.8
CHFR-220ENST00000541817 HNRNPKP61978 463 aaKnown RBP eCLIP10.06□□□□□ -0.81e-10■■■■■ 28.3
CHFR-220ENST00000541817 FZD2Q14332 565 aa10.06□□□□□ -0.8
CHFR-220ENST00000541817 SURF1Q15526 300 aa10.06□□□□□ -0.8
CHFR-220ENST00000541817 TCEA2Q15560 299 aa10.06□□□□□ -0.8
CHFR-220ENST00000541817 TRIP4Q15650 581 aaPredicted RBP10.06□□□□□ -0.8
CHFR-220ENST00000541817 KMT5BQ4FZB7 885 aa10.06□□□□□ -0.8
CHFR-220ENST00000541817 FSCBQ5H9T9 825 aa10.06□□□□□ -0.8
CHFR-220ENST00000541817 TMPRSS9Q7Z410 1059 aa10.06□□□□□ -0.8
CHFR-220ENST00000541817 DTX1Q86Y01 620 aa10.06□□□□□ -0.8
CHFR-220ENST00000541817 FAM114A1Q8IWE2 563 aa10.06□□□□□ -0.8
CHFR-220ENST00000541817 RBFAQ8N0V3 343 aa10.06□□□□□ -0.8
CHFR-220ENST00000541817 C17orf53Q8N3J3 647 aaPredicted RBP10.06□□□□□ -0.8
CHFR-220ENST00000541817 SDR16C5Q8N3Y7 309 aa10.06□□□□□ -0.8
CHFR-220ENST00000541817 CARNMT1Q8N4J0 409 aa10.06□□□□□ -0.8
CHFR-220ENST00000541817 RASSF8Q8NHQ8 419 aa10.06□□□□□ -0.8
CHFR-220ENST00000541817 PDCD6IPQ8WUM4 868 aaKnown RBP10.06□□□□□ -0.8
CHFR-220ENST00000541817 IL12RB2Q99665 862 aa10.06□□□□□ -0.8
CHFR-220ENST00000541817 STRADBQ9C0K7 418 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms