RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 ZYG11BQ9C0D3 744 aa28.44■■■□□ 2.14
CCM2-218ENST00000541586 NDFIP2Q9NV92 336 aa28.44■■■□□ 2.14
CCM2-218ENST00000541586 ATP8A1Q9Y2Q0 1164 aa28.44■■■□□ 2.14
CCM2-218ENST00000541586 FARP1Q9Y4F1 1045 aaPredicted RBP28.44■■■□□ 2.14
CCM2-218ENST00000541586 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP28.43■■■□□ 2.14
CCM2-218ENST00000541586 C5orf60A6NFR6 353 aa28.43■■■□□ 2.14
CCM2-218ENST00000541586 SLC9A3R1O14745 358 aaPredicted RBP28.43■■■□□ 2.14
CCM2-218ENST00000541586 NDC80O14777 642 aa28.43■■■□□ 2.14
CCM2-218ENST00000541586 IRAK1P51617 712 aa28.43■■■□□ 2.14
CCM2-218ENST00000541586 ADGRG2Q8IZP9 1017 aa28.43■■■□□ 2.14
CCM2-218ENST00000541586 LZTR1Q8N653 840 aa28.43■■■□□ 2.14
CCM2-218ENST00000541586 CPT1BQ92523 772 aa28.43■■■□□ 2.14
CCM2-218ENST00000541586 IGSF8Q969P0 613 aa28.43■■■□□ 2.14
CCM2-218ENST00000541586 BRD8Q9H0E9 1235 aa28.43■■■□□ 2.14
CCM2-218ENST00000541586 ARSAP15289 507 aa28.43■■■□□ 2.14
CCM2-218ENST00000541586 RHOQP17081 205 aa28.43■■■□□ 2.14
CCM2-218ENST00000541586 GARSP41250 739 aaKnown RBP28.43■■■□□ 2.14
CCM2-218ENST00000541586 PPIDQ08752 370 aaKnown RBP28.43■■■□□ 2.14
CCM2-218ENST00000541586 ADGRF1Q5T601 910 aa28.43■■■□□ 2.14
CCM2-218ENST00000541586 ARHGAP12Q8IWW6 846 aa28.43■■■□□ 2.14
CCM2-218ENST00000541586 PPIL6Q8IXY8 311 aa28.43■■■□□ 2.14
CCM2-218ENST00000541586 GJD3Q8N144 294 aa28.43■■■□□ 2.14
CCM2-218ENST00000541586 BHMTQ93088 406 aa28.43■■■□□ 2.14
CCM2-218ENST00000541586 HDAC11Q96DB2 347 aa28.43■■■□□ 2.14
CCM2-218ENST00000541586 A0A0C4DFX4 3053 aa28.42■■■□□ 2.14
CCM2-218ENST00000541586 DRGXA6NNA5 263 aa28.42■■■□□ 2.14
CCM2-218ENST00000541586 CHADO15335 359 aa28.42■■■□□ 2.14
CCM2-218ENST00000541586 NARSO43776 548 aaKnown RBP28.42■■■□□ 2.14
CCM2-218ENST00000541586 TSPAN3O60637 253 aa28.42■■■□□ 2.14
CCM2-218ENST00000541586 TACR2P21452 398 aa28.42■■■□□ 2.14
CCM2-218ENST00000541586 BASP1P80723 227 aaKnown RBP28.42■■■□□ 2.14
CCM2-218ENST00000541586 TDGQ13569 410 aa28.42■■■□□ 2.14
CCM2-218ENST00000541586 RFWD3Q6PCD5 774 aa28.42■■■□□ 2.14
CCM2-218ENST00000541586 CCDC25Q86WR0 208 aa28.42■■■□□ 2.14
CCM2-218ENST00000541586 PWWP2AQ96N64 755 aa28.42■■■□□ 2.14
CCM2-218ENST00000541586 FAM83CQ9BQN1 747 aa28.42■■■□□ 2.14
CCM2-218ENST00000541586 SHOC2Q9UQ13 582 aa28.42■■■□□ 2.14
CCM2-218ENST00000541586 CNTN5O94779 1100 aa28.41■■■□□ 2.14
CCM2-218ENST00000541586 HSD17B3P37058 310 aa28.41■■■□□ 2.14
CCM2-218ENST00000541586 UAP1Q16222 522 aaPredicted RBP28.41■■■□□ 2.14
CCM2-218ENST00000541586 EML3Q32P44 896 aa28.41■■■□□ 2.14
CCM2-218ENST00000541586 ALFQ53S48 1182 aa28.41■■■□□ 2.14
CCM2-218ENST00000541586 FAM133BQ5BKY9 247 aaKnown RBP28.41■■■□□ 2.14
CCM2-218ENST00000541586 RNF135Q8IUD6 432 aa28.41■■■□□ 2.14
CCM2-218ENST00000541586 ZCCHC9Q8N567 271 aaKnown RBP28.41■■■□□ 2.14
CCM2-218ENST00000541586 PRCCQ92733 491 aaPredicted RBP28.41■■■□□ 2.14
CCM2-218ENST00000541586 AZIN2Q96A70 460 aa28.41■■■□□ 2.14
CCM2-218ENST00000541586 MYEOVQ96EZ4 313 aa28.41■■■□□ 2.14
CCM2-218ENST00000541586 RPRD1AQ96P16 312 aaPredicted RBP28.41■■■□□ 2.14
CCM2-218ENST00000541586 FERMT1Q9BQL6 677 aa28.41■■■□□ 2.14
CCM2-218ENST00000541586 TSPYL1Q9H0U9 437 aa28.41■■■□□ 2.14
CCM2-218ENST00000541586 CD320Q9NPF0 282 aa28.41■■■□□ 2.14
CCM2-218ENST00000541586 GTSE1Q9NYZ3 720 aa28.41■■■□□ 2.14
CCM2-218ENST00000541586 NUP205Q92621 2012 aa28.41■■■□□ 2.14
CCM2-218ENST00000541586 RNF103O00237 685 aa28.4■■■□□ 2.14
CCM2-218ENST00000541586 SLMAPQ14BN4 828 aa28.4■■■□□ 2.14
CCM2-218ENST00000541586 ANKRD22Q5VYY1 191 aa28.4■■■□□ 2.14
CCM2-218ENST00000541586 AFMIDQ63HM1 303 aa28.4■■■□□ 2.14
CCM2-218ENST00000541586 C4orf22Q6V702 233 aa28.4■■■□□ 2.14
CCM2-218ENST00000541586 TFAP2DQ7Z6R9 452 aa28.4■■■□□ 2.14
CCM2-218ENST00000541586 NAT8LQ8N9F0 302 aa28.4■■■□□ 2.14
CCM2-218ENST00000541586 RAB6BQ9NRW1 208 aa28.4■■■□□ 2.14
CCM2-218ENST00000541586 TMEM248Q9NWD8 314 aa28.4■■■□□ 2.14
CCM2-218ENST00000541586 SEPT10Q9P0V9 454 aa28.4■■■□□ 2.14
CCM2-218ENST00000541586 A0A0A0MRY4 1105 aa28.4■■■□□ 2.14
CCM2-218ENST00000541586 DFFAO00273 331 aa28.4■■■□□ 2.14
CCM2-218ENST00000541586 STK10O94804 968 aaKnown RBP28.4■■■□□ 2.14
CCM2-218ENST00000541586 SLC6A4P31645 630 aa28.4■■■□□ 2.14
CCM2-218ENST00000541586 PMS2P54278 862 aa28.4■■■□□ 2.14
CCM2-218ENST00000541586 WASHC5Q12768 1159 aa28.4■■■□□ 2.14
CCM2-218ENST00000541586 PDGFRLQ15198 375 aa28.4■■■□□ 2.14
CCM2-218ENST00000541586 ANKRD20A2Q5SQ80 823 aa28.4■■■□□ 2.14
CCM2-218ENST00000541586 ANKRD20A1Q5TYW2 823 aa28.4■■■□□ 2.14
CCM2-218ENST00000541586 ANKRD20A3Q5VUR7 823 aa28.4■■■□□ 2.14
CCM2-218ENST00000541586 HOOK3Q86VS8 718 aa28.4■■■□□ 2.14
CCM2-218ENST00000541586 IRF7Q92985 503 aa28.4■■■□□ 2.14
CCM2-218ENST00000541586 ATP2A3Q93084 1043 aa28.4■■■□□ 2.14
CCM2-218ENST00000541586 ZBTB9Q96C00 473 aa28.4■■■□□ 2.14
CCM2-218ENST00000541586 OTUB2Q96DC9 234 aa28.4■■■□□ 2.14
CCM2-218ENST00000541586 SPATA13Q96N96 652 aa28.4■■■□□ 2.14
CCM2-218ENST00000541586 SLC39A8Q9C0K1 460 aa28.4■■■□□ 2.14
CCM2-218ENST00000541586 DOCK4Q8N1I0 1966 aa28.4■■■□□ 2.14
CCM2-218ENST00000541586 TCRBV7S3A2A0A539 114 aa28.39■■■□□ 2.14
CCM2-218ENST00000541586 F5H5T6 163 aa28.39■■■□□ 2.14
CCM2-218ENST00000541586 ZNF189O75820 626 aaPredicted RBP28.39■■■□□ 2.14
CCM2-218ENST00000541586 LATS1O95835 1130 aa28.39■■■□□ 2.14
CCM2-218ENST00000541586 ANO4Q32M45 955 aa28.39■■■□□ 2.14
CCM2-218ENST00000541586 TMEM25Q86YD3 366 aa28.39■■■□□ 2.14
CCM2-218ENST00000541586 LGI2Q8N0V4 545 aa28.39■■■□□ 2.14
CCM2-218ENST00000541586 UBLCP1Q8WVY7 318 aaPredicted RBP28.39■■■□□ 2.14
CCM2-218ENST00000541586 FOXP3Q9BZS1 431 aa28.39■■■□□ 2.14
CCM2-218ENST00000541586 HPS4Q9NQG7 708 aa28.39■■■□□ 2.14
CCM2-218ENST00000541586 DNAJC17Q9NVM6 304 aaKnown RBP28.39■■■□□ 2.14
CCM2-218ENST00000541586 PLK2Q9NYY3 685 aa28.39■■■□□ 2.14
CCM2-218ENST00000541586 OTOL1A6NHN0 477 aaPredicted RBP28.38■■■□□ 2.13
CCM2-218ENST00000541586 KCNK1O00180 336 aa28.38■■■□□ 2.13
CCM2-218ENST00000541586 LY6G5CQ5SRR4 150 aa28.38■■■□□ 2.13
CCM2-218ENST00000541586 ARHGEF18Q6ZSZ5 1173 aa28.38■■■□□ 2.13
CCM2-218ENST00000541586 CIR1Q86X95 450 aaPredicted RBP28.38■■■□□ 2.13
CCM2-218ENST00000541586 IQCKQ8N0W5 287 aa28.38■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms