RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 C2orf54Q08AI8 447 aa9.56□□□□□ -0.88
DDX55-208ENST00000541259 GALNT2Q10471 571 aa9.56□□□□□ -0.88
DDX55-208ENST00000541259 CDH18Q13634 790 aa9.56□□□□□ -0.88
DDX55-208ENST00000541259 TUBB2AQ13885 445 aa9.56□□□□□ -0.88
DDX55-208ENST00000541259 WHAMMP3Q1A5X7 153 aa9.56□□□□□ -0.88
DDX55-208ENST00000541259 ITPRIPL2Q3MIP1 535 aa9.56□□□□□ -0.88
DDX55-208ENST00000541259 C6orf118Q5T5N4 469 aa9.56□□□□□ -0.88
DDX55-208ENST00000541259 TTC27Q6P3X3 843 aa9.56□□□□□ -0.88
DDX55-208ENST00000541259 BLOC1S3Q6QNY0 202 aa9.56□□□□□ -0.88
DDX55-208ENST00000541259 LEKR1Q6ZMV7 388 aa9.56□□□□□ -0.88
DDX55-208ENST00000541259 SETD3Q86TU7 594 aaPredicted RBP9.56□□□□□ -0.88
DDX55-208ENST00000541259 ETFBKMTQ8IXQ9 262 aa9.56□□□□□ -0.88
DDX55-208ENST00000541259 CPA6Q8N4T0 437 aa9.56□□□□□ -0.88
DDX55-208ENST00000541259 LZTR1Q8N653 840 aa9.56□□□□□ -0.88
DDX55-208ENST00000541259 LRRN4CLQ8ND94 238 aa9.56□□□□□ -0.88
DDX55-208ENST00000541259 SLC35B2Q8TB61 432 aa9.56□□□□□ -0.88
DDX55-208ENST00000541259 MAIP1Q8WWC4 291 aa9.56□□□□□ -0.88
DDX55-208ENST00000541259 ARHGEF2Q92974 986 aaKnown RBP9.56□□□□□ -0.88
DDX55-208ENST00000541259 NXPE3Q969Y0 559 aa9.56□□□□□ -0.88
DDX55-208ENST00000541259 ALG14Q96F25 216 aa9.56□□□□□ -0.88
DDX55-208ENST00000541259 OLFM3Q96PB7 478 aa9.56□□□□□ -0.88
DDX55-208ENST00000541259 NAP1L3Q99457 506 aaPredicted RBP9.56□□□□□ -0.88
DDX55-208ENST00000541259 LGMNQ99538 433 aa9.56□□□□□ -0.88
DDX55-208ENST00000541259 FEM1AQ9BSK4 669 aa9.56□□□□□ -0.88
DDX55-208ENST00000541259 SPON2Q9BUD6 331 aa9.56□□□□□ -0.88
DDX55-208ENST00000541259 TUBB2BQ9BVA1 445 aa9.56□□□□□ -0.88
DDX55-208ENST00000541259 CARD6Q9BX69 1037 aa9.56□□□□□ -0.88
DDX55-208ENST00000541259 MUC3BQ9H195 1237 aa9.56□□□□□ -0.88
DDX55-208ENST00000541259 RETREG1Q9H6L5 497 aa9.56□□□□□ -0.88
DDX55-208ENST00000541259 L2HGDHQ9H9P8 463 aa9.56□□□□□ -0.88
DDX55-208ENST00000541259 RBM12Q9NTZ6 932 aaKnown RBP9.56□□□□□ -0.88
DDX55-208ENST00000541259 ABCB8Q9NUT2 735 aa9.56□□□□□ -0.88
DDX55-208ENST00000541259 OR51B4Q9Y5P0 310 aa9.56□□□□□ -0.88
DDX55-208ENST00000541259 ACTL7AQ9Y615 435 aa9.56□□□□□ -0.88
DDX55-208ENST00000541259 ANTXRLA6NF34 631 aa9.55□□□□□ -0.88
DDX55-208ENST00000541259 H7C0C1 242 aa9.55□□□□□ -0.88
DDX55-208ENST00000541259 J3KR12 359 aa9.55□□□□□ -0.88
DDX55-208ENST00000541259 LIASO43766 372 aa9.55□□□□□ -0.88
DDX55-208ENST00000541259 SNAP91O60641 907 aa9.55□□□□□ -0.88
DDX55-208ENST00000541259 MAFKO60675 156 aa9.55□□□□□ -0.88
DDX55-208ENST00000541259 RBP3P10745 1247 aa9.55□□□□□ -0.88
DDX55-208ENST00000541259 VAV1P15498 845 aa9.55□□□□□ -0.88
DDX55-208ENST00000541259 COILP38432 576 aaPredicted RBP9.55□□□□□ -0.88
DDX55-208ENST00000541259 GARSP41250 739 aaKnown RBP9.55□□□□□ -0.88
DDX55-208ENST00000541259 ATP5OP48047 213 aa9.55□□□□□ -0.88
DDX55-208ENST00000541259 NR2C2P49116 596 aa9.55□□□□□ -0.88
DDX55-208ENST00000541259 DGKGP49619 791 aa9.55□□□□□ -0.88
DDX55-208ENST00000541259 NRLP54845 237 aa9.55□□□□□ -0.88
DDX55-208ENST00000541259 YBEYP58557 167 aaPredicted RBP9.55□□□□□ -0.88
DDX55-208ENST00000541259 MRPS25P82663 173 aaKnown RBP9.55□□□□□ -0.88
DDX55-208ENST00000541259 KDSRQ06136 332 aa9.55□□□□□ -0.88
DDX55-208ENST00000541259 AP1B1Q10567 949 aa9.55□□□□□ -0.88
DDX55-208ENST00000541259 NR1H3Q13133 447 aa9.55□□□□□ -0.88
DDX55-208ENST00000541259 SERINC3Q13530 473 aa9.55□□□□□ -0.88
DDX55-208ENST00000541259 TDGQ13569 410 aa9.55□□□□□ -0.88
DDX55-208ENST00000541259 PDK1Q15118 436 aa9.55□□□□□ -0.88
DDX55-208ENST00000541259 OASLQ15646 514 aaKnown RBP9.55□□□□□ -0.88
DDX55-208ENST00000541259 CCNG2Q16589 344 aa9.55□□□□□ -0.88
DDX55-208ENST00000541259 CYP1B1Q16678 543 aa9.55□□□□□ -0.88
DDX55-208ENST00000541259 QPCTQ16769 361 aa9.55□□□□□ -0.88
DDX55-208ENST00000541259 GEN1Q17RS7 908 aa9.55□□□□□ -0.88
DDX55-208ENST00000541259 TMEM215Q68D42 235 aa9.55□□□□□ -0.88
DDX55-208ENST00000541259 ZNF572Q7Z3I7 529 aaPredicted RBP9.55□□□□□ -0.88
DDX55-208ENST00000541259 KIAA0907Q7Z7F0 614 aaPredicted RBP9.55□□□□□ -0.88
DDX55-208ENST00000541259 ZNF354CQ86Y25 554 aa9.55□□□□□ -0.88
DDX55-208ENST00000541259 CCDC117Q8IWD4 279 aaPredicted RBP9.55□□□□□ -0.88
DDX55-208ENST00000541259 SFTPA1Q8IWL2 248 aa9.55□□□□□ -0.88
DDX55-208ENST00000541259 KLHL7Q8IXQ5 586 aa9.55□□□□□ -0.88
DDX55-208ENST00000541259 PHTF2Q8N3S3 785 aa9.55□□□□□ -0.88
DDX55-208ENST00000541259 C12orf50Q8NA57 414 aaPredicted RBP9.55□□□□□ -0.88
DDX55-208ENST00000541259 CCNYQ8ND76 341 aa9.55□□□□□ -0.88
DDX55-208ENST00000541259 SPATA4Q8NEY3 305 aa9.55□□□□□ -0.88
DDX55-208ENST00000541259 CSGALNACT1Q8TDX6 532 aa9.55□□□□□ -0.88
DDX55-208ENST00000541259 MAGOHBQ96A72 148 aaKnown RBP9.55□□□□□ -0.88
DDX55-208ENST00000541259 ASB2Q96Q27 587 aa9.55□□□□□ -0.88
DDX55-208ENST00000541259 XPO6Q96QU8 1125 aaKnown RBP9.55□□□□□ -0.88
DDX55-208ENST00000541259 ACE2Q9BYF1 805 aaPredicted RBP9.55□□□□□ -0.88
DDX55-208ENST00000541259 SLC2A11Q9BYW1 496 aa9.55□□□□□ -0.88
DDX55-208ENST00000541259 DDX47Q9H0S4 455 aaKnown RBP9.55□□□□□ -0.88
DDX55-208ENST00000541259 MAGEH1Q9H213 219 aa9.55□□□□□ -0.88
DDX55-208ENST00000541259 FBRSL1Q9HCM7 1045 aaKnown RBP9.55□□□□□ -0.88
DDX55-208ENST00000541259 ATP13A1Q9HD20 1204 aa9.55□□□□□ -0.88
DDX55-208ENST00000541259 HEBP1Q9NRV9 189 aa9.55□□□□□ -0.88
DDX55-208ENST00000541259 DNAJC17Q9NVM6 304 aaKnown RBP9.55□□□□□ -0.88
DDX55-208ENST00000541259 KIAA1522Q9P206 1035 aaPredicted RBP9.55□□□□□ -0.88
DDX55-208ENST00000541259 PRKAG3Q9UGI9 489 aa9.55□□□□□ -0.88
DDX55-208ENST00000541259 GGA2Q9UJY4 613 aa9.55□□□□□ -0.88
DDX55-208ENST00000541259 RAD54BQ9Y620 910 aa9.55□□□□□ -0.88
DDX55-208ENST00000541259 TRIOO75962 3097 aa9.55□□□□□ -0.88
DDX55-208ENST00000541259 ARHGAP42A6NI28 874 aa9.54□□□□□ -0.88
DDX55-208ENST00000541259 MCF2LO15068 1137 aa9.54□□□□□ -0.88
DDX55-208ENST00000541259 KDELR3O43731 214 aa9.54□□□□□ -0.88
DDX55-208ENST00000541259 PHF2O75151 1096 aa9.54□□□□□ -0.88
DDX55-208ENST00000541259 ZMPSTE24O75844 475 aa9.54□□□□□ -0.88
DDX55-208ENST00000541259 PABPC1P11940 636 aaKnown RBP9.54□□□□□ -0.88
DDX55-208ENST00000541259 RBL1P28749 1068 aa9.54□□□□□ -0.88
DDX55-208ENST00000541259 CTSOP43234 321 aaPredicted RBP9.54□□□□□ -0.88
DDX55-208ENST00000541259 GALK1P51570 392 aa9.54□□□□□ -0.88
DDX55-208ENST00000541259 PLK1P53350 603 aa9.54□□□□□ -0.88
DDX55-208ENST00000541259 GDF10P55107 478 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms