RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 SALL4Q9UJQ4 1053 aa19.21■□□□□ 0.67
VPS33A-205ENST00000541169 FARP1Q9Y4F1 1045 aaPredicted RBP19.21■□□□□ 0.67
VPS33A-205ENST00000541169 PCDHGA2Q9Y5H1 932 aa19.21■□□□□ 0.67
VPS33A-205ENST00000541169 MYO18AQ92614 2054 aaKnown RBP19.21■□□□□ 0.67
VPS33A-205ENST00000541169 MACROD2A1Z1Q3 448 aa19.2■□□□□ 0.66
VPS33A-205ENST00000541169 LRRD1A4D1F6 860 aa19.2■□□□□ 0.66
VPS33A-205ENST00000541169 K7ESF4 209 aa19.2■□□□□ 0.66
VPS33A-205ENST00000541169 ZSCAN12O43309 604 aa19.2■□□□□ 0.66
VPS33A-205ENST00000541169 CETN2P41208 172 aa19.2■□□□□ 0.66
VPS33A-205ENST00000541169 COPS2P61201 443 aa19.2■□□□□ 0.66
VPS33A-205ENST00000541169 ZBTB16Q05516 673 aa19.2■□□□□ 0.66
VPS33A-205ENST00000541169 SERINC3Q13530 473 aa19.2■□□□□ 0.66
VPS33A-205ENST00000541169 DPYSL3Q14195 570 aa19.2■□□□□ 0.66
VPS33A-205ENST00000541169 ANKRD20A8PQ5CZ79 823 aa19.2■□□□□ 0.66
VPS33A-205ENST00000541169 RASSF3Q86WH2 238 aa19.2■□□□□ 0.66
VPS33A-205ENST00000541169 KATNAL2Q8IYT4 538 aa19.2■□□□□ 0.66
VPS33A-205ENST00000541169 MAML2Q8IZL2 1156 aaPredicted RBP19.2■□□□□ 0.66
VPS33A-205ENST00000541169 LRRC57Q8N9N7 239 aa19.2■□□□□ 0.66
VPS33A-205ENST00000541169 NELL1Q92832 810 aa19.2■□□□□ 0.66
VPS33A-205ENST00000541169 RBM41Q96IZ5 413 aaKnown RBP19.2■□□□□ 0.66
VPS33A-205ENST00000541169 MRGPRX3Q96LB0 322 aa19.2■□□□□ 0.66
VPS33A-205ENST00000541169 ACOX2Q99424 681 aa19.2■□□□□ 0.66
VPS33A-205ENST00000541169 PSMB7Q99436 277 aa19.2■□□□□ 0.66
VPS33A-205ENST00000541169 MAK16Q9BXY0 300 aaKnown RBP19.2■□□□□ 0.66
VPS33A-205ENST00000541169 LRRC19Q9H756 370 aa19.2■□□□□ 0.66
VPS33A-205ENST00000541169 TFR2Q9UP52 801 aa19.2■□□□□ 0.66
VPS33A-205ENST00000541169 RAD54BQ9Y620 910 aa19.2■□□□□ 0.66
VPS33A-205ENST00000541169 MUC22E2RYF6 1773 aaPredicted RBP19.19■□□□□ 0.66
VPS33A-205ENST00000541169 A0A1W2PQF6 199 aa19.19■□□□□ 0.66
VPS33A-205ENST00000541169 RASA4BC9J798 803 aa19.19■□□□□ 0.66
VPS33A-205ENST00000541169 DCLK1O15075 740 aa19.19■□□□□ 0.66
VPS33A-205ENST00000541169 ALOX15BO15296 676 aa19.19■□□□□ 0.66
VPS33A-205ENST00000541169 RASA4O43374 803 aa19.19■□□□□ 0.66
VPS33A-205ENST00000541169 RNASEH1O60930 286 aaKnown RBP19.19■□□□□ 0.66
VPS33A-205ENST00000541169 ZRANB2O95218 330 aaKnown RBP eCLIP19.19■□□□□ 0.66
VPS33A-205ENST00000541169 SP9P0CG40 484 aa19.19■□□□□ 0.66
VPS33A-205ENST00000541169 CTNNA1P35221 906 aaKnown RBP19.19■□□□□ 0.66
VPS33A-205ENST00000541169 GJC1P36383 396 aa19.19■□□□□ 0.66
VPS33A-205ENST00000541169 INO80DQ53TQ3 878 aaPredicted RBP19.19■□□□□ 0.66
VPS33A-205ENST00000541169 AFMIDQ63HM1 303 aa19.19■□□□□ 0.66
VPS33A-205ENST00000541169 PEX26Q7Z412 305 aa19.19■□□□□ 0.66
VPS33A-205ENST00000541169 DSG4Q86SJ6 1040 aa19.19■□□□□ 0.66
VPS33A-205ENST00000541169 C11orf74Q86VG3 221 aa19.19■□□□□ 0.66
VPS33A-205ENST00000541169 LONP2Q86WA8 852 aa19.19■□□□□ 0.66
VPS33A-205ENST00000541169 PLPP6Q8IY26 295 aa19.19■□□□□ 0.66
VPS33A-205ENST00000541169 SH2D3CQ8N5H7 860 aa19.19■□□□□ 0.66
VPS33A-205ENST00000541169 UBL4BQ8N7F7 174 aa19.19■□□□□ 0.66
VPS33A-205ENST00000541169 ATP11CQ8NB49 1132 aa19.19■□□□□ 0.66
VPS33A-205ENST00000541169 EXD1Q8NHP7 514 aa19.19■□□□□ 0.66
VPS33A-205ENST00000541169 ATRIPQ8WXE1 791 aa19.19■□□□□ 0.66
VPS33A-205ENST00000541169 ISG20Q96AZ6 181 aaKnown RBP19.19■□□□□ 0.66
VPS33A-205ENST00000541169 MYO19Q96H55 970 aa19.19■□□□□ 0.66
VPS33A-205ENST00000541169 ALS2CR12Q96Q35 445 aa19.19■□□□□ 0.66
VPS33A-205ENST00000541169 NDFIP2Q9NV92 336 aa19.19■□□□□ 0.66
VPS33A-205ENST00000541169 AMFRQ9UKV5 643 aa19.19■□□□□ 0.66
VPS33A-205ENST00000541169 SCML1Q9UN30 329 aa19.19■□□□□ 0.66
VPS33A-205ENST00000541169 PPP2R2CQ9Y2T4 447 aa19.19■□□□□ 0.66
VPS33A-205ENST00000541169 PCDHA3Q9Y5H8 950 aa19.19■□□□□ 0.66
VPS33A-205ENST00000541169 ATG2BQ96BY7 2078 aa19.19■□□□□ 0.66
VPS33A-205ENST00000541169 ZNF217O75362 1048 aa19.18■□□□□ 0.66
VPS33A-205ENST00000541169 ZMPSTE24O75844 475 aa19.18■□□□□ 0.66
VPS33A-205ENST00000541169 KRT1P04264 644 aa19.18■□□□□ 0.66
VPS33A-205ENST00000541169 TDGF1P13385 188 aa19.18■□□□□ 0.66
VPS33A-205ENST00000541169 IL4RP24394 825 aa19.18■□□□□ 0.66
VPS33A-205ENST00000541169 PRKCHP24723 683 aa19.18■□□□□ 0.66
VPS33A-205ENST00000541169 SERPINH1P50454 418 aaKnown RBP19.18■□□□□ 0.66
VPS33A-205ENST00000541169 TFDP2Q14188 446 aa19.18■□□□□ 0.66
VPS33A-205ENST00000541169 ELAVL3Q14576 367 aaKnown RBP19.18■□□□□ 0.66
VPS33A-205ENST00000541169 ATP13A4Q4VNC1 1196 aa19.18■□□□□ 0.66
VPS33A-205ENST00000541169 TMEM92Q6UXU6 159 aa19.18■□□□□ 0.66
VPS33A-205ENST00000541169 BZW1Q7L1Q6 419 aaKnown RBP19.18■□□□□ 0.66
VPS33A-205ENST00000541169 WDR5BQ86VZ2 330 aa19.18■□□□□ 0.66
VPS33A-205ENST00000541169 ZNF354CQ86Y25 554 aa19.18■□□□□ 0.66
VPS33A-205ENST00000541169 OR7D4Q8NG98 312 aa19.18■□□□□ 0.66
VPS33A-205ENST00000541169 OR2T3Q8NH03 318 aa19.18■□□□□ 0.66
VPS33A-205ENST00000541169 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.18■□□□□ 0.66
VPS33A-205ENST00000541169 RNF157Q96PX1 679 aa19.18■□□□□ 0.66
VPS33A-205ENST00000541169 SEMA4AQ9H3S1 761 aa19.18■□□□□ 0.66
VPS33A-205ENST00000541169 NOL6Q9H6R4 1146 aaKnown RBP19.18■□□□□ 0.66
VPS33A-205ENST00000541169 HAUS2Q9NVX0 235 aa19.18■□□□□ 0.66
VPS33A-205ENST00000541169 BCCIPQ9P287 314 aaKnown RBP eCLIP19.18■□□□□ 0.66
VPS33A-205ENST00000541169 GUCA1BQ9UMX6 200 aa19.18■□□□□ 0.66
VPS33A-205ENST00000541169 EFR3BQ9Y2G0 817 aa19.18■□□□□ 0.66
VPS33A-205ENST00000541169 CKAP5Q14008 2032 aa19.18■□□□□ 0.66
VPS33A-205ENST00000541169 CACNA1IQ9P0X4 2223 aa19.17■□□□□ 0.66
VPS33A-205ENST00000541169 TCRBV21S2A2A0A5A6 115 aa19.17■□□□□ 0.66
VPS33A-205ENST00000541169 GRID2IPA4D2P6 1211 aa19.17■□□□□ 0.66
VPS33A-205ENST00000541169 MX2P20592 715 aa19.17■□□□□ 0.66
VPS33A-205ENST00000541169 AMPD1P23109 780 aa19.17■□□□□ 0.66
VPS33A-205ENST00000541169 CTNNA2P26232 953 aa19.17■□□□□ 0.66
VPS33A-205ENST00000541169 RECQLP46063 649 aaPredicted RBP19.17■□□□□ 0.66
VPS33A-205ENST00000541169 RFTN1Q14699 578 aaPredicted RBP19.17■□□□□ 0.66
VPS33A-205ENST00000541169 PAFAH1B3Q15102 231 aaKnown RBP19.17■□□□□ 0.66
VPS33A-205ENST00000541169 ACCSLQ4AC99 568 aa19.17■□□□□ 0.66
VPS33A-205ENST00000541169 TFDP3Q5H9I0 405 aa19.17■□□□□ 0.66
VPS33A-205ENST00000541169 NT5DC3Q86UY8 548 aa19.17■□□□□ 0.66
VPS33A-205ENST00000541169 PCDH20Q8N6Y1 951 aaKnown RBP19.17■□□□□ 0.66
VPS33A-205ENST00000541169 ZBTB44Q8NCP5 570 aa19.17■□□□□ 0.66
VPS33A-205ENST00000541169 TRIM58Q8NG06 486 aa19.17■□□□□ 0.66
VPS33A-205ENST00000541169 RPL10LQ96L21 214 aaKnown RBP19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms