RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 DPP10Q8N608 796 aa15.19■□□□□ 0.02
SMARCA4-207ENST00000541122 F5H5T6 163 aa15.19■□□□□ 0.02
SMARCA4-207ENST00000541122 DPYSL4O14531 572 aa15.19■□□□□ 0.02
SMARCA4-207ENST00000541122 TADA2AO75478 443 aa15.19■□□□□ 0.02
SMARCA4-207ENST00000541122 PARNO95453 639 aaKnown RBP15.19■□□□□ 0.02
SMARCA4-207ENST00000541122 PPP2R1BP30154 601 aa15.19■□□□□ 0.02
SMARCA4-207ENST00000541122 GRIA4P48058 902 aa15.19■□□□□ 0.02
SMARCA4-207ENST00000541122 RENBPP51606 427 aa15.19■□□□□ 0.02
SMARCA4-207ENST00000541122 RPS7P62081 194 aaKnown RBP15.19■□□□□ 0.02
SMARCA4-207ENST00000541122 PPP3CAQ08209 521 aa15.19■□□□□ 0.02
SMARCA4-207ENST00000541122 ATAD3BQ5T9A4 648 aa15.19■□□□□ 0.02
SMARCA4-207ENST00000541122 METTL21CQ5VZV1 264 aa15.19■□□□□ 0.02
SMARCA4-207ENST00000541122 C11orf88Q6PI97 169 aa15.19■□□□□ 0.02
SMARCA4-207ENST00000541122 C1orf186Q6ZWK4 172 aa15.19■□□□□ 0.02
SMARCA4-207ENST00000541122 EPHX4Q8IUS5 362 aa15.19■□□□□ 0.02
SMARCA4-207ENST00000541122 HS6ST3Q8IZP7 471 aa15.19■□□□□ 0.02
SMARCA4-207ENST00000541122 DEPDC4Q8N2C3 294 aa15.19■□□□□ 0.02
SMARCA4-207ENST00000541122 DNAJC28Q9NX36 388 aa15.19■□□□□ 0.02
SMARCA4-207ENST00000541122 DNAJB4Q9UDY4 337 aa15.19■□□□□ 0.02
SMARCA4-207ENST00000541122 NUDT5Q9UKK9 219 aa15.19■□□□□ 0.02
SMARCA4-207ENST00000541122 POLIQ9UNA4 740 aa15.19■□□□□ 0.02
SMARCA4-207ENST00000541122 TNPO3Q9Y5L0 923 aaKnown RBP15.19■□□□□ 0.02
SMARCA4-207ENST00000541122 WARSP23381 471 aaKnown RBP15.19■□□□□ 0.02
SMARCA4-207ENST00000541122 PHKG1Q16816 387 aa15.19■□□□□ 0.02
SMARCA4-207ENST00000541122 PROSER1Q86XN7 944 aa15.19■□□□□ 0.02
SMARCA4-207ENST00000541122 EPB41L1Q9H4G0 881 aa15.19■□□□□ 0.02
SMARCA4-207ENST00000541122 ASB7Q9H672 318 aa15.19■□□□□ 0.02
SMARCA4-207ENST00000541122 RPS6KA6Q9UK32 745 aa15.19■□□□□ 0.02
SMARCA4-207ENST00000541122 MAPRE3Q9UPY8 281 aa15.19■□□□□ 0.02
SMARCA4-207ENST00000541122 AMPD1P23109 780 aa15.18■□□□□ 0.02
SMARCA4-207ENST00000541122 CDC42P60953 191 aa15.18■□□□□ 0.02
SMARCA4-207ENST00000541122 INSCQ1MX18 579 aa15.18■□□□□ 0.02
SMARCA4-207ENST00000541122 LPCAT4Q643R3 524 aa15.18■□□□□ 0.02
SMARCA4-207ENST00000541122 ZNF544Q6NX49 715 aa15.18■□□□□ 0.02
SMARCA4-207ENST00000541122 KIAA0408Q6ZU52 694 aa15.18■□□□□ 0.02
SMARCA4-207ENST00000541122 ILDR2Q71H61 639 aa15.18■□□□□ 0.02
SMARCA4-207ENST00000541122 TDRPQ86YL5 185 aa15.18■□□□□ 0.02
SMARCA4-207ENST00000541122 ZNF512Q96ME7 567 aaPredicted RBP15.18■□□□□ 0.02
SMARCA4-207ENST00000541122 MUC13Q9H3R2 512 aa15.18■□□□□ 0.02
SMARCA4-207ENST00000541122 SCUBE2Q9NQ36 999 aa15.18■□□□□ 0.02
SMARCA4-207ENST00000541122 GMPPBQ9Y5P6 360 aa15.18■□□□□ 0.02
SMARCA4-207ENST00000541122 S100A3P33764 101 aa15.18■□□□□ 0.02
SMARCA4-207ENST00000541122 OXCT1P55809 520 aa15.18■□□□□ 0.02
SMARCA4-207ENST00000541122 GRIK3Q13003 919 aa15.18■□□□□ 0.02
SMARCA4-207ENST00000541122 CDC16Q13042 620 aa15.18■□□□□ 0.02
SMARCA4-207ENST00000541122 USP39Q53GS9 565 aaKnown RBP15.18■□□□□ 0.02
SMARCA4-207ENST00000541122 PCID2Q5JVF3 399 aa15.18■□□□□ 0.02
SMARCA4-207ENST00000541122 NEK10Q6ZWH5 1172 aa15.18■□□□□ 0.02
SMARCA4-207ENST00000541122 IRF2BP1Q8IU81 584 aa15.18■□□□□ 0.02
SMARCA4-207ENST00000541122 FAM47BQ8NA70 645 aa15.18■□□□□ 0.02
SMARCA4-207ENST00000541122 RBM15BQ8NDT2 890 aaKnown RBP15.18■□□□□ 0.02
SMARCA4-207ENST00000541122 ALG3Q92685 438 aa15.18■□□□□ 0.02
SMARCA4-207ENST00000541122 SAGE2PA6NJ88 616 aa15.18■□□□□ 0.02
SMARCA4-207ENST00000541122 LHX1P48742 406 aa15.18■□□□□ 0.02
SMARCA4-207ENST00000541122 CASP5P51878 434 aa15.18■□□□□ 0.02
SMARCA4-207ENST00000541122 MARC1Q5VT66 337 aa15.18■□□□□ 0.02
SMARCA4-207ENST00000541122 TBC1D21Q8IYX1 336 aa15.18■□□□□ 0.02
SMARCA4-207ENST00000541122 B3GALNT2Q8NCR0 500 aa15.18■□□□□ 0.02
SMARCA4-207ENST00000541122 MRPL57Q9BQC6 102 aaKnown RBP15.18■□□□□ 0.02
SMARCA4-207ENST00000541122 KCNMB3Q9NPA1 279 aa15.18■□□□□ 0.02
SMARCA4-207ENST00000541122 NT5MQ9NPB1 228 aa15.18■□□□□ 0.02
SMARCA4-207ENST00000541122 NMRK2Q9NPI5 230 aa15.18■□□□□ 0.02
SMARCA4-207ENST00000541122 GNG14A0A1W2PPG7 69 aa15.18■□□□□ 0.02
SMARCA4-207ENST00000541122 RNF225M0QZC1 329 aaPredicted RBP15.18■□□□□ 0.02
SMARCA4-207ENST00000541122 ZMPSTE24O75844 475 aa15.18■□□□□ 0.02
SMARCA4-207ENST00000541122 ERVK-10P10266 1014 aa15.18■□□□□ 0.02
SMARCA4-207ENST00000541122 ST8SIA6P61647 398 aa15.18■□□□□ 0.02
SMARCA4-207ENST00000541122 KHDRBS2Q5VWX1 349 aaKnown RBP15.18■□□□□ 0.02
SMARCA4-207ENST00000541122 TSEN34Q9BSV6 310 aaKnown RBP15.18■□□□□ 0.02
SMARCA4-207ENST00000541122 NMUR2Q9GZQ4 415 aa15.18■□□□□ 0.02
SMARCA4-207ENST00000541122 WBP11Q9Y2W2 641 aaKnown RBP15.18■□□□□ 0.02
SMARCA4-207ENST00000541122 RWDD3Q9Y3V2 267 aa15.18■□□□□ 0.02
SMARCA4-207ENST00000541122 CASZ1Q86V15 1759 aa15.18■□□□□ 0.02
SMARCA4-207ENST00000541122 LOC100506127A0A0U1RQW1 187 aa15.17■□□□□ 0.02
SMARCA4-207ENST00000541122 A0A1W2PPM1 405 aa15.17■□□□□ 0.02
SMARCA4-207ENST00000541122 TCRBV9S1A1TA0A576 114 aa15.17■□□□□ 0.02
SMARCA4-207ENST00000541122 ITGA2BP08514 1039 aa15.17■□□□□ 0.02
SMARCA4-207ENST00000541122 TPH1P17752 444 aa15.17■□□□□ 0.02
SMARCA4-207ENST00000541122 CLCN5P51795 746 aa15.17■□□□□ 0.02
SMARCA4-207ENST00000541122 TDRD10Q5VZ19 366 aaKnown RBP15.17■□□□□ 0.02
SMARCA4-207ENST00000541122 EGFLAMQ63HQ2 1017 aa15.17■□□□□ 0.02
SMARCA4-207ENST00000541122 ATG14Q6ZNE5 492 aa15.17■□□□□ 0.02
SMARCA4-207ENST00000541122 SEMA4DQ92854 862 aa15.17■□□□□ 0.02
SMARCA4-207ENST00000541122 HPS1Q92902 700 aa15.17■□□□□ 0.02
SMARCA4-207ENST00000541122 HOPXQ9BPY8 73 aaPredicted RBP15.17■□□□□ 0.02
SMARCA4-207ENST00000541122 ACE2Q9BYF1 805 aaPredicted RBP15.17■□□□□ 0.02
SMARCA4-207ENST00000541122 PNPLA8Q9NP80 782 aa15.17■□□□□ 0.02
SMARCA4-207ENST00000541122 RPRD1BQ9NQG5 326 aaKnown RBP15.17■□□□□ 0.02
SMARCA4-207ENST00000541122 CDH22Q9UJ99 828 aa15.17■□□□□ 0.02
SMARCA4-207ENST00000541122 PNMA8BQ9ULN7 279 aaPredicted RBP15.17■□□□□ 0.02
SMARCA4-207ENST00000541122 ING4Q9UNL4 249 aa15.17■□□□□ 0.02
SMARCA4-207ENST00000541122 TMX2Q9Y320 296 aa15.17■□□□□ 0.02
SMARCA4-207ENST00000541122 DYRK1BQ9Y463 629 aa15.17■□□□□ 0.02
SMARCA4-207ENST00000541122 FAM86B1E9PN63 330 aa15.17■□□□□ 0.02
SMARCA4-207ENST00000541122 FAM86B2P0C5J1 330 aa15.17■□□□□ 0.02
SMARCA4-207ENST00000541122 GPC1P35052 558 aa15.17■□□□□ 0.02
SMARCA4-207ENST00000541122 C3orf67Q6ZVT6 689 aa15.17■□□□□ 0.02
SMARCA4-207ENST00000541122 MILR1Q7Z6M3 343 aa15.17■□□□□ 0.02
SMARCA4-207ENST00000541122 ANKRD13AQ8IZ07 590 aa15.17■□□□□ 0.02
SMARCA4-207ENST00000541122 C12orf50Q8NA57 414 aaPredicted RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms