RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 C2orf71A6NGG8 1288 aa12.53□□□□□ -0.4
AP003559.1-201ENST00000540906 GREM1O60565 184 aa12.53□□□□□ -0.4
AP003559.1-201ENST00000540906 TSPAN3O60637 253 aa12.53□□□□□ -0.4
AP003559.1-201ENST00000540906 SUN1O94901 812 aa12.53□□□□□ -0.4
AP003559.1-201ENST00000540906 CPP00450 1065 aa12.53□□□□□ -0.4
AP003559.1-201ENST00000540906 IVLP07476 585 aa12.53□□□□□ -0.4
AP003559.1-201ENST00000540906 CHN1P15882 459 aa12.53□□□□□ -0.4
AP003559.1-201ENST00000540906 TSHRP16473 764 aa12.53□□□□□ -0.4
AP003559.1-201ENST00000540906 BMPR1AP36894 532 aa12.53□□□□□ -0.4
AP003559.1-201ENST00000540906 GEMIN4P57678 1058 aaKnown RBP12.53□□□□□ -0.4
AP003559.1-201ENST00000540906 CAMK1Q14012 370 aa12.53□□□□□ -0.4
AP003559.1-201ENST00000540906 VEPH1Q14D04 833 aa12.53□□□□□ -0.4
AP003559.1-201ENST00000540906 TAF12Q16514 161 aa12.53□□□□□ -0.4
AP003559.1-201ENST00000540906 C5orf22Q49AR2 442 aa12.53□□□□□ -0.4
AP003559.1-201ENST00000540906 C9orf50Q5SZB4 431 aa12.53□□□□□ -0.4
AP003559.1-201ENST00000540906 TRABD2AQ86V40 505 aa12.53□□□□□ -0.4
AP003559.1-201ENST00000540906 KLHDC8BQ8IXV7 354 aa12.53□□□□□ -0.4
AP003559.1-201ENST00000540906 SRRM1Q8IYB3 904 aaKnown RBP12.53□□□□□ -0.4
AP003559.1-201ENST00000540906 ARL14EPQ8N8R7 260 aaPredicted RBP12.53□□□□□ -0.4
AP003559.1-201ENST00000540906 SPPL3Q8TCT6 385 aa12.53□□□□□ -0.4
AP003559.1-201ENST00000540906 ATXN2LQ8WWM7 1075 aaKnown RBP12.53□□□□□ -0.4
AP003559.1-201ENST00000540906 CCDC77Q9BR77 488 aa12.53□□□□□ -0.4
AP003559.1-201ENST00000540906 GLOD4Q9HC38 313 aa12.53□□□□□ -0.4
AP003559.1-201ENST00000540906 XAB2Q9HCS7 855 aaKnown RBP12.53□□□□□ -0.4
AP003559.1-201ENST00000540906 IL1RAPL1Q9NZN1 696 aa12.53□□□□□ -0.4
AP003559.1-201ENST00000540906 TRHDEQ9UKU6 1024 aa12.53□□□□□ -0.4
AP003559.1-201ENST00000540906 ZFP37Q9Y6Q3 630 aaPredicted RBP12.53□□□□□ -0.4
AP003559.1-201ENST00000540906 RANBP2P49792 3224 aaKnown RBP12.52□□□□□ -0.4
AP003559.1-201ENST00000540906 A0A0D9SEW6 157 aa12.52□□□□□ -0.41
AP003559.1-201ENST00000540906 MTSS1O43312 755 aa12.52□□□□□ -0.41
AP003559.1-201ENST00000540906 F7P08709 466 aaPredicted RBP12.52□□□□□ -0.41
AP003559.1-201ENST00000540906 LSP1P33241 339 aa12.52□□□□□ -0.41
AP003559.1-201ENST00000540906 PHBP35232 272 aa12.52□□□□□ -0.41
AP003559.1-201ENST00000540906 NDST2P52849 883 aa12.52□□□□□ -0.41
AP003559.1-201ENST00000540906 ZNF33AQ06730 810 aa12.52□□□□□ -0.41
AP003559.1-201ENST00000540906 SLC10A7Q0GE19 358 aa12.52□□□□□ -0.41
AP003559.1-201ENST00000540906 CERCAMQ5T4B2 595 aa12.52□□□□□ -0.41
AP003559.1-201ENST00000540906 CROCCP2Q86T23 111 aa12.52□□□□□ -0.41
AP003559.1-201ENST00000540906 GPR65Q8IYL9 337 aa12.52□□□□□ -0.41
AP003559.1-201ENST00000540906 PGBD5Q8N414 524 aa12.52□□□□□ -0.41
AP003559.1-201ENST00000540906 OR7D4Q8NG98 312 aa12.52□□□□□ -0.41
AP003559.1-201ENST00000540906 POF1BQ8WVV4 589 aa12.52□□□□□ -0.41
AP003559.1-201ENST00000540906 PLD4Q96BZ4 506 aa12.52□□□□□ -0.41
AP003559.1-201ENST00000540906 STAMBPL1Q96FJ0 436 aa12.52□□□□□ -0.41
AP003559.1-201ENST00000540906 FCRL3Q96P31 734 aaPredicted RBP12.52□□□□□ -0.41
AP003559.1-201ENST00000540906 CDK5RAP1Q96SZ6 601 aaKnown RBP12.52□□□□□ -0.41
AP003559.1-201ENST00000540906 MLXIPLQ9NP71 852 aa12.52□□□□□ -0.41
AP003559.1-201ENST00000540906 CASS4Q9NQ75 786 aa12.52□□□□□ -0.41
AP003559.1-201ENST00000540906 RBM22Q9NW64 420 aaKnown RBP eCLIP12.52□□□□□ -0.41
AP003559.1-201ENST00000540906 HCFC1R1Q9NWW0 138 aa12.52□□□□□ -0.41
AP003559.1-201ENST00000540906 PCDHA11Q9Y5I1 949 aa12.52□□□□□ -0.41
AP003559.1-201ENST00000540906 F5H5T6 163 aa12.51□□□□□ -0.41
AP003559.1-201ENST00000540906 C8AP07357 584 aa12.51□□□□□ -0.41
AP003559.1-201ENST00000540906 MBL2P11226 248 aaPredicted RBP12.51□□□□□ -0.41
AP003559.1-201ENST00000540906 MLNP12872 115 aa12.51□□□□□ -0.41
AP003559.1-201ENST00000540906 TPH1P17752 444 aa12.51□□□□□ -0.41
AP003559.1-201ENST00000540906 GLDCP23378 1020 aa12.51□□□□□ -0.41
AP003559.1-201ENST00000540906 PRKCHP24723 683 aa12.51□□□□□ -0.41
AP003559.1-201ENST00000540906 GABRR2P28476 465 aa12.51□□□□□ -0.41
AP003559.1-201ENST00000540906 CCR2P41597 374 aa12.51□□□□□ -0.41
AP003559.1-201ENST00000540906 KPNA1P52294 538 aaPredicted RBP12.51□□□□□ -0.41
AP003559.1-201ENST00000540906 SEC24CP53992 1094 aa12.51□□□□□ -0.41
AP003559.1-201ENST00000540906 MAXP61244 160 aa12.51□□□□□ -0.41
AP003559.1-201ENST00000540906 CDK16Q00536 496 aa12.51□□□□□ -0.41
AP003559.1-201ENST00000540906 NIPAL4Q0D2K0 466 aa12.51□□□□□ -0.41
AP003559.1-201ENST00000540906 STEAP4Q687X5 459 aa12.51□□□□□ -0.41
AP003559.1-201ENST00000540906 ITPRIPL1Q6GPH6 555 aa12.51□□□□□ -0.41
AP003559.1-201ENST00000540906 FOXR1Q6PIV2 292 aa12.51□□□□□ -0.41
AP003559.1-201ENST00000540906 ADGRD1Q6QNK2 874 aa12.51□□□□□ -0.41
AP003559.1-201ENST00000540906 TADA2BQ86TJ2 420 aa12.51□□□□□ -0.41
AP003559.1-201ENST00000540906 C4orf33Q8N1A6 199 aa12.51□□□□□ -0.41
AP003559.1-201ENST00000540906 KREMEN2Q8NCW0 462 aa12.51□□□□□ -0.41
AP003559.1-201ENST00000540906 VAT1Q99536 393 aa12.51□□□□□ -0.41
AP003559.1-201ENST00000540906 FERMT1Q9BQL6 677 aa12.51□□□□□ -0.41
AP003559.1-201ENST00000540906 ENTPD7Q9NQZ7 604 aa12.51□□□□□ -0.41
AP003559.1-201ENST00000540906 CHD7Q9P2D1 2997 aa12.51□□□□□ -0.41
AP003559.1-201ENST00000540906 PSMC3IPQ9P2W1 217 aaPredicted RBP12.51□□□□□ -0.41
AP003559.1-201ENST00000540906 SLC24A2Q9UI40 661 aa12.51□□□□□ -0.41
AP003559.1-201ENST00000540906 TMEM120BA0PK00 339 aa12.51□□□□□ -0.41
AP003559.1-201ENST00000540906 SDR42E2A6NKP2 422 aa12.51□□□□□ -0.41
AP003559.1-201ENST00000540906 MUSKO15146 869 aa12.51□□□□□ -0.41
AP003559.1-201ENST00000540906 GRM6O15303 877 aa12.51□□□□□ -0.41
AP003559.1-201ENST00000540906 CCL16O15467 120 aa12.51□□□□□ -0.41
AP003559.1-201ENST00000540906 SPAG7O75391 227 aa12.51□□□□□ -0.41
AP003559.1-201ENST00000540906 OLFM2O95897 454 aa12.51□□□□□ -0.41
AP003559.1-201ENST00000540906 OR1E1P30953 314 aa12.51□□□□□ -0.41
AP003559.1-201ENST00000540906 ETFBP38117 255 aa12.51□□□□□ -0.41
AP003559.1-201ENST00000540906 HARS2P49590 506 aaKnown RBP12.51□□□□□ -0.41
AP003559.1-201ENST00000540906 LRRC14Q15048 493 aa12.51□□□□□ -0.41
AP003559.1-201ENST00000540906 DENND5AQ6IQ26 1287 aa12.51□□□□□ -0.41
AP003559.1-201ENST00000540906 RIBC1Q8N443 379 aaPredicted RBP12.51□□□□□ -0.41
AP003559.1-201ENST00000540906 ARFGAP2Q8N6H7 521 aa12.51□□□□□ -0.41
AP003559.1-201ENST00000540906 PPM1NQ8N819 430 aa12.51□□□□□ -0.41
AP003559.1-201ENST00000540906 MGARPQ8TDB4 240 aa12.51□□□□□ -0.41
AP003559.1-201ENST00000540906 SLC44A1Q8WWI5 657 aa12.51□□□□□ -0.41
AP003559.1-201ENST00000540906 LRRC39Q96DD0 335 aa12.51□□□□□ -0.41
AP003559.1-201ENST00000540906 FCRL5Q96RD9 977 aa12.51□□□□□ -0.41
AP003559.1-201ENST00000540906 CYTH2Q99418 400 aa12.51□□□□□ -0.41
AP003559.1-201ENST00000540906 KLF6Q99612 283 aaPredicted RBP12.51□□□□□ -0.41
AP003559.1-201ENST00000540906 NT5MQ9NPB1 228 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms