RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	GREB1L	Q9C091	1923 aa	Predicted RBP	5.79	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	PIK3R2	O00459	728 aa		5.79	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	PMM2	O15305	246 aa		5.79	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	NBN	O60934	754 aa		5.79	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	FGF18	O76093	207 aa		5.79	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	CYBB	P04839	570 aa		5.79	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	HOXB8	P17481	243 aa	Predicted RBP	5.79	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	SLC18A2	Q05940	514 aa		5.79	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	TLR1	Q15399	786 aa		5.79	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	SHH	Q15465	462 aa		5.79	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	DRICH1	Q6PGQ1	229 aa	Predicted RBP	5.79	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	DARS2	Q6PI48	645 aa	Known RBP	5.79	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	C1orf228	Q6PIY5	440 aa		5.79	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	PDZD4	Q76G19	769 aa	Predicted RBP	5.79	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	LCA5	Q86VQ0	697 aa		5.79	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	PHF13	Q86YI8	300 aa	Predicted RBP	5.79	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	FAF2	Q96CS3	445 aa		5.79	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	PPP1R36	Q96LQ0	422 aa		5.79	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	CNBD2	Q96M20	576 aa		5.79	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	ACSS2	Q9NR19	701 aa		5.79	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	PIH1D1	Q9NWS0	290 aa	Known RBP	5.79	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	HBS1L	Q9Y450	684 aa	Known RBP	5.79	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	MAD1L1	Q9Y6D9	718 aa		5.79	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	SIPA1L1	O43166	1804 aa		5.79	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	OTOF	Q9HC10	1997 aa		5.79	□□□□□ -1.48
RAPGEF4-215	ENST00000540783		A0A1B0GTW7	788 aa		5.79	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	STK25	O00506	426 aa		5.79	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	VILL	O15195	856 aa		5.79	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	FBXO21	O94952	628 aa		5.79	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	CALB1	P05937	261 aa		5.79	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	F7	P08709	466 aa	Predicted RBP	5.79	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	NELFE	P18615	380 aa	Known RBP	5.79	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	MMP8	P22894	467 aa		5.79	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	PML	P29590	882 aa		5.79	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	KPNA1	P52294	538 aa	Predicted RBP	5.79	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	CHN2	P52757	468 aa		5.79	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	ADAM17	P78536	824 aa		5.79	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	MGAT3	Q09327	533 aa		5.79	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	STX3	Q13277	289 aa		5.79	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	HADH	Q16836	314 aa	Known RBP	5.79	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	ARL13B	Q3SXY8	428 aa		5.79	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	NADK2	Q4G0N4	442 aa		5.79	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	RAB6C	Q53S08	254 aa		5.79	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	BTBD8	Q5XKL5	378 aa		5.79	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	ATG16L1	Q676U5	607 aa		5.79	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	TRMT10B	Q6PF06	316 aa	Known RBP	5.79	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	PCGF5	Q86SE9	256 aa		5.79	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	ZNF677	Q86XU0	584 aa		5.79	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	UNC5B	Q8IZJ1	945 aa		5.79	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	GALNT4	Q8N4A0	578 aa		5.79	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	ARFGAP1	Q8N6T3	406 aa		5.79	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	RNF148	Q8N7C7	305 aa		5.79	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	KCTD6	Q8NC69	237 aa		5.79	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	RAB6C	Q9H0N0	254 aa		5.79	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	LIN28A	Q9H9Z2	209 aa	Known RBP	5.79	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	MAN1C1	Q9NR34	630 aa		5.79	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	ASAH2	Q9NR71	780 aa		5.79	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	RAB6B	Q9NRW1	208 aa		5.79	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	PNPO	Q9NVS9	261 aa		5.79	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	UBAP1	Q9NZ09	502 aa		5.79	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	BARX2	Q9UMQ3	279 aa	Predicted RBP	5.79	□□□□□ -1.48
RAPGEF4-215	ENST00000540783		H7C0C1	242 aa		5.79	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	SLC9A3R1	O14745	358 aa	Predicted RBP	5.79	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	NRP1	O14786	923 aa		5.79	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	ZSCAN9	O15535	394 aa	Predicted RBP	5.79	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	FKBP6	O75344	327 aa		5.79	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	ATP6V1G1	O75348	118 aa		5.79	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	CST3	P01034	146 aa	Predicted RBP	5.79	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	APOE	P02649	317 aa		5.79	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	SOD2	P04179	222 aa		5.79	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	CA3	P07451	260 aa		5.79	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	SNRPA	P09012	282 aa	Known RBP	5.79	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	PCSK6	P29122	969 aa		5.79	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	ATP5O	P48047	213 aa		5.79	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	TRIM71	Q2Q1W2	868 aa	Known RBP	5.79	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	ZACN	Q401N2	412 aa		5.79	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	C9orf57	Q5W0N0	161 aa		5.79	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	KLHDC10	Q6PID8	442 aa		5.79	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	SLC26A11	Q86WA9	606 aa		5.79	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	TMEM130	Q8N3G9	435 aa		5.79	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	METTL25	Q8N6Q8	603 aa		5.79	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	ZNF557	Q8N988	423 aa	Predicted RBP	5.79	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	ICA1L	Q8NDH6	482 aa		5.79	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	HERC2P3	Q9BVR0	1158 aa		5.79	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	ZNF576	Q9H609	170 aa		5.79	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	PPCS	Q9HAB8	311 aa		5.79	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	TMCO1	Q9UM00	188 aa		5.79	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	TDRKH	Q9Y2W6	561 aa	Known RBP	5.79	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	C3orf70	A6NLC5	250 aa	Predicted RBP	5.78	□□□□□ -1.48
RAPGEF4-215	ENST00000540783		M0QYV0	167 aa		5.78	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	CLPTM1	O96005	669 aa		5.78	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	C4BPA	P04003	597 aa	Known RBP	5.78	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	TFAP2A	P05549	437 aa		5.78	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	BCAT1	P54687	386 aa		5.78	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	FAM189B	P81408	668 aa		5.78	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	COG7	P83436	770 aa		5.78	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	C1QBP	Q07021	282 aa	Known RBP	5.78	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	DSC3	Q14574	896 aa		5.78	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	ANKRD20A4	Q4UJ75	823 aa		5.78	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	TTC39B	Q5VTQ0	682 aa	Predicted RBP	5.78	□□□□□ -1.48

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