RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 GALNT7Q86SF2 657 aa11.26□□□□□ -0.61
PBX1-212ENST00000540236 MARVELD2Q8N4S9 558 aa11.26□□□□□ -0.61
PBX1-212ENST00000540236 ACTL9Q8TC94 416 aa11.26□□□□□ -0.61
PBX1-212ENST00000540236 TCF12Q99081 682 aa11.26□□□□□ -0.61
PBX1-212ENST00000540236 AGPAT3Q9NRZ7 376 aa11.26□□□□□ -0.61
PBX1-212ENST00000540236 WTIPA6NIX2 430 aaPredicted RBP11.26□□□□□ -0.61
PBX1-212ENST00000540236 ACADVLP49748 655 aa11.26□□□□□ -0.61
PBX1-212ENST00000540236 TRIM32Q13049 653 aa11.26□□□□□ -0.61
PBX1-212ENST00000540236 PADI6Q6TGC4 694 aa11.26□□□□□ -0.61
PBX1-212ENST00000540236 NDNFQ8TB73 568 aa11.26□□□□□ -0.61
PBX1-212ENST00000540236 S100ZQ8WXG8 99 aa11.26□□□□□ -0.61
PBX1-212ENST00000540236 PHF21BQ96EK2 531 aa11.26□□□□□ -0.61
PBX1-212ENST00000540236 TEKT3Q9BXF9 490 aa11.26□□□□□ -0.61
PBX1-212ENST00000540236 PLK2Q9NYY3 685 aa11.26□□□□□ -0.61
PBX1-212ENST00000540236 IGSF9Q9P2J2 1179 aa11.26□□□□□ -0.61
PBX1-212ENST00000540236 ITGA11Q9UKX5 1188 aa11.26□□□□□ -0.61
PBX1-212ENST00000540236 SPATA31A3Q5VYP0 1347 aa11.26□□□□□ -0.61
PBX1-212ENST00000540236 TRIM38O00635 465 aa11.26□□□□□ -0.61
PBX1-212ENST00000540236 APOL1O14791 398 aa11.26□□□□□ -0.61
PBX1-212ENST00000540236 KCNA5P22460 613 aa11.26□□□□□ -0.61
PBX1-212ENST00000540236 ANXA13P27216 316 aa11.26□□□□□ -0.61
PBX1-212ENST00000540236 ADSSP30520 456 aa11.26□□□□□ -0.61
PBX1-212ENST00000540236 ZSWIM7Q19AV6 140 aa11.26□□□□□ -0.61
PBX1-212ENST00000540236 TFDP3Q5H9I0 405 aa11.26□□□□□ -0.61
PBX1-212ENST00000540236 CMC1Q7Z7K0 106 aa11.26□□□□□ -0.61
PBX1-212ENST00000540236 GAD1Q99259 594 aa11.26□□□□□ -0.61
PBX1-212ENST00000540236 REV1Q9UBZ9 1251 aa11.26□□□□□ -0.61
PBX1-212ENST00000540236 PLLPQ9Y342 182 aa11.26□□□□□ -0.61
PBX1-212ENST00000540236 ATP6AP2A0A1C7CYW4 349 aa11.26□□□□□ -0.61
PBX1-212ENST00000540236 LOC110117498-PIK3R3F6TDL0 507 aa11.26□□□□□ -0.61
PBX1-212ENST00000540236 ATP6AP2O75787 350 aa11.26□□□□□ -0.61
PBX1-212ENST00000540236 GDF11O95390 407 aa11.26□□□□□ -0.61
PBX1-212ENST00000540236 GNAO1P09471 354 aa11.26□□□□□ -0.61
PBX1-212ENST00000540236 FGFR1P11362 822 aa11.26□□□□□ -0.61
PBX1-212ENST00000540236 MTHFD1P11586 935 aaKnown RBP11.26□□□□□ -0.61
PBX1-212ENST00000540236 FMO3P31513 532 aa11.26□□□□□ -0.61
PBX1-212ENST00000540236 SOX10P56693 466 aa11.26□□□□□ -0.61
PBX1-212ENST00000540236 PPP1R8Q12972 351 aaKnown RBP11.26□□□□□ -0.61
PBX1-212ENST00000540236 PWP1Q13610 501 aa11.26□□□□□ -0.61
PBX1-212ENST00000540236 NFYCQ13952 458 aa11.26□□□□□ -0.61
PBX1-212ENST00000540236 C8orf59Q8N0T1 100 aaPredicted RBP11.26□□□□□ -0.61
PBX1-212ENST00000540236 TTC30BQ8N4P2 665 aa11.26□□□□□ -0.61
PBX1-212ENST00000540236 FBXO30Q8TB52 745 aa11.26□□□□□ -0.61
PBX1-212ENST00000540236 ENKURQ8TC29 256 aa11.26□□□□□ -0.61
PBX1-212ENST00000540236 BIRC8Q96P09 236 aa11.26□□□□□ -0.61
PBX1-212ENST00000540236 FARSBQ9NSD9 589 aaKnown RBP11.26□□□□□ -0.61
PBX1-212ENST00000540236 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.26□□□□□ -0.61
PBX1-212ENST00000540236 DCDC2Q9UHG0 476 aa11.26□□□□□ -0.61
PBX1-212ENST00000540236 PNMA6FA0A0J9YX94 578 aa11.26□□□□□ -0.61
PBX1-212ENST00000540236 TIMM44O43615 452 aa11.26□□□□□ -0.61
PBX1-212ENST00000540236 PIGNO95427 931 aa11.26□□□□□ -0.61
PBX1-212ENST00000540236 PUDPQ08623 228 aa11.26□□□□□ -0.61
PBX1-212ENST00000540236 PHKG1Q16816 387 aa11.26□□□□□ -0.61
PBX1-212ENST00000540236 ALFQ53S48 1182 aa11.26□□□□□ -0.61
PBX1-212ENST00000540236 KRT39Q6A163 491 aa11.26□□□□□ -0.61
PBX1-212ENST00000540236 RASSF6Q6ZTQ3 369 aa11.26□□□□□ -0.61
PBX1-212ENST00000540236 ANKRD13BQ86YJ7 626 aa11.26□□□□□ -0.61
PBX1-212ENST00000540236 CBWD2Q8IUF1 395 aa11.26□□□□□ -0.61
PBX1-212ENST00000540236 SPERTQ8NA61 448 aa11.26□□□□□ -0.61
PBX1-212ENST00000540236 SEPT8Q92599 483 aa11.26□□□□□ -0.61
PBX1-212ENST00000540236 TBCBQ99426 244 aa11.26□□□□□ -0.61
PBX1-212ENST00000540236 TINF2Q9BSI4 451 aa11.26□□□□□ -0.61
PBX1-212ENST00000540236 INO80BQ9C086 356 aaPredicted RBP11.26□□□□□ -0.61
PBX1-212ENST00000540236 SLC38A7Q9NVC3 462 aa11.26□□□□□ -0.61
PBX1-212ENST00000540236 SETBP1Q9Y6X0 1596 aa11.25□□□□□ -0.61
PBX1-212ENST00000540236 RGSL1A5PLK6 1076 aa11.25□□□□□ -0.61
PBX1-212ENST00000540236 PLOD2O00469 737 aa11.25□□□□□ -0.61
PBX1-212ENST00000540236 ABCB1P08183 1280 aaPredicted RBP11.25□□□□□ -0.61
PBX1-212ENST00000540236 TCF4P15884 667 aa11.25□□□□□ -0.61
PBX1-212ENST00000540236 SOX6P35712 828 aa11.25□□□□□ -0.61
PBX1-212ENST00000540236 RGS7P49802 495 aa11.25□□□□□ -0.61
PBX1-212ENST00000540236 FXR2P51116 673 aaKnown RBP eCLIP11.25□□□□□ -0.61
PBX1-212ENST00000540236 BCAR1P56945 870 aa11.25□□□□□ -0.61
PBX1-212ENST00000540236 DDI2Q5TDH0 399 aa11.25□□□□□ -0.61
PBX1-212ENST00000540236 STRA8Q7Z7C7 330 aa11.25□□□□□ -0.61
PBX1-212ENST00000540236 CAMK1DQ8IU85 385 aa11.25□□□□□ -0.61
PBX1-212ENST00000540236 TNFRSF25Q93038 417 aa11.25□□□□□ -0.61
PBX1-212ENST00000540236 FEM1AQ9BSK4 669 aa11.25□□□□□ -0.61
PBX1-212ENST00000540236 ADI1Q9BV57 179 aa11.25□□□□□ -0.61
PBX1-212ENST00000540236 ABCB9Q9NP78 766 aa11.25□□□□□ -0.61
PBX1-212ENST00000540236 NCF1BA6NI72 391 aaPredicted RBP11.25□□□□□ -0.61
PBX1-212ENST00000540236 NCF1CA8MVU1 366 aaPredicted RBP11.25□□□□□ -0.61
PBX1-212ENST00000540236 CXorf49A8MYA2 514 aaPredicted RBP11.25□□□□□ -0.61
PBX1-212ENST00000540236 BPGMP07738 259 aa11.25□□□□□ -0.61
PBX1-212ENST00000540236 NCF1P14598 390 aaPredicted RBP11.25□□□□□ -0.61
PBX1-212ENST00000540236 MUTP22033 750 aa11.25□□□□□ -0.61
PBX1-212ENST00000540236 RPL22P35268 128 aaKnown RBP11.25□□□□□ -0.61
PBX1-212ENST00000540236 MCOLN2Q8IZK6 566 aa11.25□□□□□ -0.61
PBX1-212ENST00000540236 NEDD1Q8NHV4 660 aa11.25□□□□□ -0.61
PBX1-212ENST00000540236 TRPC4APQ8TEL6 797 aa11.25□□□□□ -0.61
PBX1-212ENST00000540236 AKAP1Q92667 903 aaKnown RBP eCLIP11.25□□□□□ -0.61
PBX1-212ENST00000540236 HSFY1Q96LI6 401 aa11.25□□□□□ -0.61
PBX1-212ENST00000540236 ZNF358Q9NW07 568 aa11.25□□□□□ -0.61
PBX1-212ENST00000540236 ATPIF1Q9UII2 106 aa11.25□□□□□ -0.61
PBX1-212ENST00000540236 ASTN1O14525 1302 aa11.25□□□□□ -0.61
PBX1-212ENST00000540236 EVPLLA8MZ36 301 aa11.25□□□□□ -0.61
PBX1-212ENST00000540236 H3BNH8 94 aa11.25□□□□□ -0.61
PBX1-212ENST00000540236 RNASEH2AO75792 299 aaKnown RBP11.25□□□□□ -0.61
PBX1-212ENST00000540236 AMIGO1Q86WK6 493 aa11.25□□□□□ -0.61
PBX1-212ENST00000540236 C9orf16Q9BUW7 83 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms