RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 SPATA17Q96L03 361 aa10.17□□□□□ -0.78
TRAF1-202ENST00000540010 SYT15Q9BQS2 421 aa10.17□□□□□ -0.78
TRAF1-202ENST00000540010 TMEM79Q9BSE2 394 aa10.17□□□□□ -0.78
TRAF1-202ENST00000540010 CASS4Q9NQ75 786 aa10.17□□□□□ -0.78
TRAF1-202ENST00000540010 TRMT13Q9NUP7 481 aaKnown RBP10.17□□□□□ -0.78
TRAF1-202ENST00000540010 ARL8BQ9NVJ2 186 aa10.17□□□□□ -0.78
TRAF1-202ENST00000540010 GDAP2Q9NXN4 497 aa10.17□□□□□ -0.78
TRAF1-202ENST00000540010 PLA2G4CQ9UP65 541 aa10.17□□□□□ -0.78
TRAF1-202ENST00000540010 ARL5CA6NH57 179 aa10.16□□□□□ -0.78
TRAF1-202ENST00000540010 MYO1GB0I1T2 1018 aa10.16□□□□□ -0.78
TRAF1-202ENST00000540010 MAPK10P53779 464 aa10.16□□□□□ -0.78
TRAF1-202ENST00000540010 NAGLUP54802 743 aa10.16□□□□□ -0.78
TRAF1-202ENST00000540010 BNIP1Q12981 228 aa10.16□□□□□ -0.78
TRAF1-202ENST00000540010 SLC44A4Q53GD3 710 aa10.16□□□□□ -0.78
TRAF1-202ENST00000540010 ZC3H12AQ5D1E8 599 aaKnown RBP10.16□□□□□ -0.78
TRAF1-202ENST00000540010 RIPOR1Q6ZS17 1223 aa10.16□□□□□ -0.78
TRAF1-202ENST00000540010 SERINC5Q86VE9 423 aa10.16□□□□□ -0.78
TRAF1-202ENST00000540010 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.16□□□□□ -0.78
TRAF1-202ENST00000540010 B4GALNT2Q8NHY0 566 aa10.16□□□□□ -0.78
TRAF1-202ENST00000540010 BLOC1S5Q8TDH9 187 aa10.16□□□□□ -0.78
TRAF1-202ENST00000540010 CLPTM1LQ96KA5 538 aa10.16□□□□□ -0.78
TRAF1-202ENST00000540010 ANKRD27Q96NW4 1050 aa10.16□□□□□ -0.78
TRAF1-202ENST00000540010 SLC4A5Q9BY07 1137 aa10.16□□□□□ -0.78
TRAF1-202ENST00000540010 DDX28Q9NUL7 540 aaKnown RBP10.16□□□□□ -0.78
TRAF1-202ENST00000540010 RNF186Q9NXI6 227 aa10.16□□□□□ -0.78
TRAF1-202ENST00000540010 SCHIP1Q9P0W5 487 aaPredicted RBP10.16□□□□□ -0.78
TRAF1-202ENST00000540010 DRG1Q9Y295 367 aaKnown RBP10.16□□□□□ -0.78
TRAF1-202ENST00000540010 ACTL7BQ9Y614 415 aa10.16□□□□□ -0.78
TRAF1-202ENST00000540010 PTGESO14684 152 aa10.16□□□□□ -0.78
TRAF1-202ENST00000540010 CHRNA1P02708 482 aa10.16□□□□□ -0.78
TRAF1-202ENST00000540010 ALBP02768 609 aa10.16□□□□□ -0.78
TRAF1-202ENST00000540010 CPB1P15086 417 aa10.16□□□□□ -0.78
TRAF1-202ENST00000540010 GSTT1P30711 240 aa10.16□□□□□ -0.78
TRAF1-202ENST00000540010 PPARGP37231 505 aaPredicted RBP10.16□□□□□ -0.78
TRAF1-202ENST00000540010 GP5P40197 560 aa10.16□□□□□ -0.78
TRAF1-202ENST00000540010 LHX1P48742 406 aa10.16□□□□□ -0.78
TRAF1-202ENST00000540010 CCDC81Q6ZN84 652 aa10.16□□□□□ -0.78
TRAF1-202ENST00000540010 CLNKQ7Z7G1 428 aa10.16□□□□□ -0.78
TRAF1-202ENST00000540010 CRYBG2Q8N1P7 616 aa10.16□□□□□ -0.78
TRAF1-202ENST00000540010 ARFGAP1Q8N6T3 406 aa10.16□□□□□ -0.78
TRAF1-202ENST00000540010 KBTBD7Q8WVZ9 684 aa10.16□□□□□ -0.78
TRAF1-202ENST00000540010 HTR3CQ8WXA8 447 aa10.16□□□□□ -0.78
TRAF1-202ENST00000540010 EDEM1Q92611 657 aa10.16□□□□□ -0.78
TRAF1-202ENST00000540010 TSPAN17Q96FV3 270 aa10.16□□□□□ -0.78
TRAF1-202ENST00000540010 GRIP2Q9C0E4 1043 aa10.16□□□□□ -0.78
TRAF1-202ENST00000540010 AGO3Q9H9G7 860 aaKnown RBP10.16□□□□□ -0.78
TRAF1-202ENST00000540010 UTP6Q9NYH9 597 aaKnown RBP10.16□□□□□ -0.78
TRAF1-202ENST00000540010 NCKIPSDQ9NZQ3 722 aa10.16□□□□□ -0.78
TRAF1-202ENST00000540010 ZNF212Q9UDV6 495 aa10.16□□□□□ -0.78
TRAF1-202ENST00000540010 VANGL2Q9ULK5 521 aa10.16□□□□□ -0.78
TRAF1-202ENST00000540010 CITO14578 2027 aa10.16□□□□□ -0.78
TRAF1-202ENST00000540010 TCRBV9S1A1TA0A576 114 aa10.16□□□□□ -0.78
TRAF1-202ENST00000540010 SYNDIG1LA6NDD5 238 aa10.16□□□□□ -0.78
TRAF1-202ENST00000540010 TRPC5OSA6NMA1 111 aa10.16□□□□□ -0.78
TRAF1-202ENST00000540010 E7ENQ6 273 aa10.16□□□□□ -0.78
TRAF1-202ENST00000540010 M0R3G1 203 aa10.16□□□□□ -0.78
TRAF1-202ENST00000540010 USP1O94782 785 aa10.16□□□□□ -0.78
TRAF1-202ENST00000540010 PFKMP08237 780 aa10.16□□□□□ -0.78
TRAF1-202ENST00000540010 CHRM3P20309 590 aa10.16□□□□□ -0.78
TRAF1-202ENST00000540010 ATP6V1C1P21283 382 aa10.16□□□□□ -0.78
TRAF1-202ENST00000540010 FGFR3P22607 806 aa10.16□□□□□ -0.78
TRAF1-202ENST00000540010 PCSK1P29120 753 aa10.16□□□□□ -0.78
TRAF1-202ENST00000540010 RAB27AP51159 221 aa10.16□□□□□ -0.78
TRAF1-202ENST00000540010 CSE1LP55060 971 aaKnown RBP10.16□□□□□ -0.78
TRAF1-202ENST00000540010 RNF220Q5VTB9 566 aa10.16□□□□□ -0.78
TRAF1-202ENST00000540010 OLFML1Q6UWY5 402 aa10.16□□□□□ -0.78
TRAF1-202ENST00000540010 TMEM110Q86TL2 294 aa10.16□□□□□ -0.78
TRAF1-202ENST00000540010 ZBTB46Q86UZ6 589 aa10.16□□□□□ -0.78
TRAF1-202ENST00000540010 OSTM1Q86WC4 334 aa10.16□□□□□ -0.78
TRAF1-202ENST00000540010 TNS4Q8IZW8 715 aa10.16□□□□□ -0.78
TRAF1-202ENST00000540010 CYP4X1Q8N118 509 aa10.16□□□□□ -0.78
TRAF1-202ENST00000540010 PCDH20Q8N6Y1 951 aaKnown RBP10.16□□□□□ -0.78
TRAF1-202ENST00000540010 NDRG1Q92597 394 aaKnown RBP10.16□□□□□ -0.78
TRAF1-202ENST00000540010 ASIC4Q96FT7 647 aa10.16□□□□□ -0.78
TRAF1-202ENST00000540010 HSFY1Q96LI6 401 aa10.16□□□□□ -0.78
TRAF1-202ENST00000540010 SNRNP25Q9BV90 132 aaKnown RBP10.16□□□□□ -0.78
TRAF1-202ENST00000540010 ASPSCR1Q9BZE9 553 aa10.16□□□□□ -0.78
TRAF1-202ENST00000540010 NMUR2Q9GZQ4 415 aa10.16□□□□□ -0.78
TRAF1-202ENST00000540010 NDUFA13Q9P0J0 144 aa10.16□□□□□ -0.78
TRAF1-202ENST00000540010 GIT1Q9Y2X7 761 aa10.16□□□□□ -0.78
TRAF1-202ENST00000540010 H0YGN5 161 aa10.16□□□□□ -0.78
TRAF1-202ENST00000540010 C2CD2LO14523 706 aa10.16□□□□□ -0.78
TRAF1-202ENST00000540010 RASSF9O75901 435 aa10.16□□□□□ -0.78
TRAF1-202ENST00000540010 ITGAVP06756 1048 aa10.16□□□□□ -0.78
TRAF1-202ENST00000540010 ODC1P11926 461 aa10.16□□□□□ -0.78
TRAF1-202ENST00000540010 ALADP13716 330 aa10.16□□□□□ -0.78
TRAF1-202ENST00000540010 TMED10P49755 219 aaKnown RBP10.16□□□□□ -0.78
TRAF1-202ENST00000540010 TKTL1P51854 596 aa10.16□□□□□ -0.78
TRAF1-202ENST00000540010 KCNK10P57789 538 aa10.16□□□□□ -0.78
TRAF1-202ENST00000540010 ABCE1P61221 599 aaKnown RBP10.16□□□□□ -0.78
TRAF1-202ENST00000540010 LACTB2Q53H82 288 aaPredicted RBP10.16□□□□□ -0.78
TRAF1-202ENST00000540010 RAB6CQ53S08 254 aa10.16□□□□□ -0.78
TRAF1-202ENST00000540010 OTUD3Q5T2D3 398 aaPredicted RBP10.16□□□□□ -0.78
TRAF1-202ENST00000540010 CCNJLQ8IV13 435 aa10.16□□□□□ -0.78
TRAF1-202ENST00000540010 GLIS1Q8NBF1 620 aa10.16□□□□□ -0.78
TRAF1-202ENST00000540010 OR6Y1Q8NGX8 325 aa10.16□□□□□ -0.78
TRAF1-202ENST00000540010 JADE3Q92613 823 aa10.16□□□□□ -0.78
TRAF1-202ENST00000540010 WNT8BQ93098 351 aa10.16□□□□□ -0.78
TRAF1-202ENST00000540010 TLCD1Q96CP7 247 aa10.16□□□□□ -0.78
TRAF1-202ENST00000540010 MARK4Q96L34 752 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms