RNA–Protein interactions for RNA: ENST00000539815.5

GNE-205, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 3,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-205ENST00000539815 EFL1Q7Z2Z2 1120 aaKnown RBP7.82□□□□□ -1.16
GNE-205ENST00000539815 BBS5Q8N3I7 341 aa7.82□□□□□ -1.16
GNE-205ENST00000539815 GRIN3AQ8TCU5 1115 aa7.82□□□□□ -1.16
GNE-205ENST00000539815 MED15Q96RN5 788 aa7.82□□□□□ -1.16
GNE-205ENST00000539815 GFM1Q96RP9 751 aaKnown RBP7.82□□□□□ -1.16
GNE-205ENST00000539815 GCNT4Q9P109 453 aa7.82□□□□□ -1.16
GNE-205ENST00000539815 ARMCX3Q9UH62 379 aaPredicted RBP7.82□□□□□ -1.16
GNE-205ENST00000539815 SRPRBQ9Y5M8 271 aaKnown RBP7.82□□□□□ -1.16
GNE-205ENST00000539815 PRAMEF26H0Y7S4 382 aa7.81□□□□□ -1.16
GNE-205ENST00000539815 TM4SF5O14894 197 aa7.81□□□□□ -1.16
GNE-205ENST00000539815 NR3C1P04150 777 aa7.81□□□□□ -1.16
GNE-205ENST00000539815 EDN1P05305 212 aa7.81□□□□□ -1.16
GNE-205ENST00000539815 C6P13671 934 aa7.81□□□□□ -1.16
GNE-205ENST00000539815 PDGFRAP16234 1089 aa7.81□□□□□ -1.16
GNE-205ENST00000539815 C5AR1P21730 350 aa7.81□□□□□ -1.16
GNE-205ENST00000539815 KELP23276 732 aa7.81□□□□□ -1.16
GNE-205ENST00000539815 TBXAS1P24557 533 aaPredicted RBP7.81□□□□□ -1.16
GNE-205ENST00000539815 SYKP43405 635 aa7.81□□□□□ -1.16
GNE-205ENST00000539815 ECT2LQ008S8 904 aa7.81□□□□□ -1.16
GNE-205ENST00000539815 DEUP1Q05D60 604 aa7.81□□□□□ -1.16
GNE-205ENST00000539815 LY6DQ14210 128 aa7.81□□□□□ -1.16
GNE-205ENST00000539815 PTK2BQ14289 1009 aa7.81□□□□□ -1.16
GNE-205ENST00000539815 TMEM119Q4V9L6 283 aa7.81□□□□□ -1.16
GNE-205ENST00000539815 PIGZQ86VD9 579 aa7.81□□□□□ -1.16
GNE-205ENST00000539815 SLC41A1Q8IVJ1 513 aa7.81□□□□□ -1.16
GNE-205ENST00000539815 NDUFAF2Q8N183 169 aa7.81□□□□□ -1.16
GNE-205ENST00000539815 ARRDC3Q96B67 414 aa7.81□□□□□ -1.16
GNE-205ENST00000539815 TTLL2Q9BWV7 592 aa7.81□□□□□ -1.16
GNE-205ENST00000539815 DNAI1Q9UI46 699 aa7.81□□□□□ -1.16
GNE-205ENST00000539815 TK2O00142 265 aa7.81□□□□□ -1.16
GNE-205ENST00000539815 MYO1FO00160 1098 aa7.81□□□□□ -1.16
GNE-205ENST00000539815 ARNTLO00327 626 aa7.81□□□□□ -1.16
GNE-205ENST00000539815 FBXO21O94952 628 aa7.81□□□□□ -1.16
GNE-205ENST00000539815 TDGF1P13385 188 aa7.81□□□□□ -1.16
GNE-205ENST00000539815 CSTF2P33240 577 aaKnown RBP eCLIP7.81□□□□□ -1.16
GNE-205ENST00000539815 ACADSBP45954 432 aa7.81□□□□□ -1.16
GNE-205ENST00000539815 GEN1Q17RS7 908 aa7.81□□□□□ -1.16
GNE-205ENST00000539815 COLEC12Q5KU26 742 aa7.81□□□□□ -1.16
GNE-205ENST00000539815 IRAK1BP1Q5VVH5 260 aa7.81□□□□□ -1.16
GNE-205ENST00000539815 BSPRYQ5W0U4 402 aa7.81□□□□□ -1.16
GNE-205ENST00000539815 CD300LGQ6UXG3 332 aa7.81□□□□□ -1.16
GNE-205ENST00000539815 RBM44Q6ZP01 1051 aaKnown RBP7.81□□□□□ -1.16
GNE-205ENST00000539815 FBXL13Q8NEE6 735 aa7.81□□□□□ -1.16
GNE-205ENST00000539815 VCPIP1Q96JH7 1222 aa7.81□□□□□ -1.16
GNE-205ENST00000539815 TMEM74Q96NL1 305 aa7.81□□□□□ -1.16
GNE-205ENST00000539815 CCNL2Q96S94 520 aaPredicted RBP7.81□□□□□ -1.16
GNE-205ENST00000539815 CMKLR1Q99788 373 aa7.81□□□□□ -1.16
GNE-205ENST00000539815 MKRN2Q9H000 416 aaKnown RBP7.81□□□□□ -1.16
GNE-205ENST00000539815 HAUS2Q9NVX0 235 aa7.81□□□□□ -1.16
GNE-205ENST00000539815 RHPN2P1A8MT19 583 aa7.81□□□□□ -1.16
GNE-205ENST00000539815 H3BQF6 201 aa7.81□□□□□ -1.16
GNE-205ENST00000539815 PIK3R2O00459 728 aa7.81□□□□□ -1.16
GNE-205ENST00000539815 HCRTO43612 131 aa7.81□□□□□ -1.16
GNE-205ENST00000539815 E2F6O75461 281 aa7.81□□□□□ -1.16
GNE-205ENST00000539815 TPPPO94811 219 aa7.81□□□□□ -1.16
GNE-205ENST00000539815 TNFSF15O95150 251 aa7.81□□□□□ -1.16
GNE-205ENST00000539815 ETFBP38117 255 aa7.81□□□□□ -1.16
GNE-205ENST00000539815 ADIGQ0VDE8 80 aa7.81□□□□□ -1.16
GNE-205ENST00000539815 BST2Q10589 180 aaKnown RBP7.81□□□□□ -1.16
GNE-205ENST00000539815 NME3Q13232 169 aa7.81□□□□□ -1.16
GNE-205ENST00000539815 ARL13BQ3SXY8 428 aa7.81□□□□□ -1.16
GNE-205ENST00000539815 RWDD4Q6NW29 188 aaKnown RBP7.81□□□□□ -1.16
GNE-205ENST00000539815 TMEM270Q6UE05 265 aa7.81□□□□□ -1.16
GNE-205ENST00000539815 PACS1Q6VY07 963 aa7.81□□□□□ -1.16
GNE-205ENST00000539815 ZNF574Q6ZN55 896 aaPredicted RBP7.81□□□□□ -1.16
GNE-205ENST00000539815 SDCCAG8Q86SQ7 713 aaPredicted RBP7.81□□□□□ -1.16
GNE-205ENST00000539815 METTL3Q86U44 580 aaKnown RBP7.81□□□□□ -1.16
GNE-205ENST00000539815 SLCO6A1Q86UG4 719 aa7.81□□□□□ -1.16
GNE-205ENST00000539815 HID1Q8IV36 788 aa7.81□□□□□ -1.16
GNE-205ENST00000539815 CXorf40AQ8TE69 158 aa7.81□□□□□ -1.16
GNE-205ENST00000539815 TNFRSF25Q93038 417 aa7.81□□□□□ -1.16
GNE-205ENST00000539815 SLC35B4Q969S0 331 aa7.81□□□□□ -1.16
GNE-205ENST00000539815 FAM84AQ96KN4 292 aa7.81□□□□□ -1.16
GNE-205ENST00000539815 DPEP3Q9H4B8 488 aa7.81□□□□□ -1.16
GNE-205ENST00000539815 ST6GALNAC4Q9H4F1 302 aa7.81□□□□□ -1.16
GNE-205ENST00000539815 KIAA1257Q9ULG3 409 aa7.81□□□□□ -1.16
GNE-205ENST00000539815 SCML2Q9UQR0 700 aa7.81□□□□□ -1.16
GNE-205ENST00000539815 CHD6Q8TD26 2715 aa7.8□□□□□ -1.16
GNE-205ENST00000539815 IRAK2O43187 625 aa7.8□□□□□ -1.16
GNE-205ENST00000539815 VPS4BO75351 444 aa7.8□□□□□ -1.16
GNE-205ENST00000539815 CNTN5O94779 1100 aa7.8□□□□□ -1.16
GNE-205ENST00000539815 RHOBTB3O94955 611 aa7.8□□□□□ -1.16
GNE-205ENST00000539815 OAS1P00973 400 aaKnown RBP7.8□□□□□ -1.16
GNE-205ENST00000539815 MYF5P13349 255 aa7.8□□□□□ -1.16
GNE-205ENST00000539815 JUNDP17535 347 aa7.8□□□□□ -1.16
GNE-205ENST00000539815 CSKP41240 450 aa7.8□□□□□ -1.16
GNE-205ENST00000539815 GRIN1Q05586 938 aa7.8□□□□□ -1.16
GNE-205ENST00000539815 ELAVL3Q14576 367 aaKnown RBP7.8□□□□□ -1.16
GNE-205ENST00000539815 CDKN3Q16667 212 aa7.8□□□□□ -1.16
GNE-205ENST00000539815 TAF8Q7Z7C8 310 aa7.8□□□□□ -1.16
GNE-205ENST00000539815 LSM14AQ8ND56 463 aaKnown RBP7.8□□□□□ -1.16
GNE-205ENST00000539815 OR8K1Q8NGG5 319 aa7.8□□□□□ -1.16
GNE-205ENST00000539815 UBA3Q8TBC4 463 aa7.8□□□□□ -1.16
GNE-205ENST00000539815 CABS1Q96KC9 395 aa7.8□□□□□ -1.16
GNE-205ENST00000539815 RPL10LQ96L21 214 aaKnown RBP7.8□□□□□ -1.16
GNE-205ENST00000539815 SIRPGQ9P1W8 387 aa7.8□□□□□ -1.16
GNE-205ENST00000539815 VPS18Q9P253 973 aa7.8□□□□□ -1.16
GNE-205ENST00000539815 VPS4AQ9UN37 437 aa7.8□□□□□ -1.16
GNE-205ENST00000539815 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.8□□□□□ -1.16
GNE-205ENST00000539815 A0A1W2PPC4 97 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms