RNA–Protein interactions for RNA: ENST00000539798.1

KLHL35-204, Transcript of kelch like family member 35, human

APPRIS P1 TSL 1 (best) BASIC

Gene KLHL35, Length 1,936 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KLHL35-204	ENST00000539798	HMCES	Q96FZ2	354 aa		27.57	■■■□□ 2
KLHL35-204	ENST00000539798	CEP295NL	Q96MC4	621 aa		27.57	■■■□□ 2
KLHL35-204	ENST00000539798	PCDH10	Q9P2E7	1040 aa		27.57	■■■□□ 2
KLHL35-204	ENST00000539798	AFF4	Q9UHB7	1163 aa	Known RBP	27.57	■■■□□ 2
KLHL35-204	ENST00000539798	PSAT1	Q9Y617	370 aa		27.57	■■■□□ 2
KLHL35-204	ENST00000539798	MT-CYB	P00156	380 aa	Predicted RBP	27.56	■■■□□ 2
KLHL35-204	ENST00000539798	SOD2	P04179	222 aa		27.56	■■■□□ 2
KLHL35-204	ENST00000539798	TUFM	P49411	452 aa	Known RBP	27.56	■■■□□ 2
KLHL35-204	ENST00000539798	SERPINB9	P50453	376 aa		27.56	■■■□□ 2
KLHL35-204	ENST00000539798	LRRC26	Q2I0M4	334 aa		27.56	■■■□□ 2
KLHL35-204	ENST00000539798	TIGD7	Q6NT04	549 aa	Predicted RBP	27.56	■■■□□ 2
KLHL35-204	ENST00000539798	SLC39A11	Q8N1S5	342 aa		27.56	■■■□□ 2
KLHL35-204	ENST00000539798	DOCK4	Q8N1I0	1966 aa		27.56	■■■□□ 2
KLHL35-204	ENST00000539798	ZCWPW2	A0A1B0GU75	182 aa		27.55	■■■□□ 2
KLHL35-204	ENST00000539798	ABLIM3	O94929	683 aa		27.55	■■■□□ 2
KLHL35-204	ENST00000539798	HMGA1	P17096	107 aa	Known RBP	27.55	■■■□□ 2
KLHL35-204	ENST00000539798	KCNQ1	P51787	676 aa		27.55	■■■□□ 2
KLHL35-204	ENST00000539798	SMAD1	Q15797	465 aa	Known RBP	27.55	■■■□□ 2
KLHL35-204	ENST00000539798	MROH9	Q5TGP6	573 aa		27.55	■■■□□ 2
KLHL35-204	ENST00000539798	KIAA1841	Q6NSI8	718 aa		27.55	■■■□□ 2
KLHL35-204	ENST00000539798	FAM117B	Q6P1L5	589 aa		27.55	■■■□□ 2
KLHL35-204	ENST00000539798	PACS1	Q6VY07	963 aa		27.55	■■■□□ 2
KLHL35-204	ENST00000539798	FAM47E	Q6ZV65	393 aa		27.55	■■■□□ 2
KLHL35-204	ENST00000539798	CERS2	Q96G23	380 aa		27.55	■■■□□ 2
KLHL35-204	ENST00000539798	RBM22	Q9NW64	420 aa	Known RBP eCLIP	27.55	■■■□□ 2
KLHL35-204	ENST00000539798	GOLGA6L7	A0A1B0GV03	622 aa		27.55	■■■□□ 2
KLHL35-204	ENST00000539798	MYO1C	O00159	1063 aa		27.55	■■■□□ 2
KLHL35-204	ENST00000539798	ERVK-10	P10266	1014 aa		27.55	■■■□□ 2
KLHL35-204	ENST00000539798	ALAD	P13716	330 aa		27.55	■■■□□ 2
KLHL35-204	ENST00000539798	TPH1	P17752	444 aa		27.55	■■■□□ 2
KLHL35-204	ENST00000539798	NPY2R	P49146	381 aa		27.55	■■■□□ 2
KLHL35-204	ENST00000539798	MGAT5	Q09328	741 aa		27.55	■■■□□ 2
KLHL35-204	ENST00000539798	NAB1	Q13506	487 aa		27.55	■■■□□ 2
KLHL35-204	ENST00000539798	NAPEPLD	Q6IQ20	393 aa		27.55	■■■□□ 2
KLHL35-204	ENST00000539798	TIFAB	Q6ZNK6	161 aa		27.55	■■■□□ 2
KLHL35-204	ENST00000539798	ZNF669	Q96BR6	464 aa	Predicted RBP	27.55	■■■□□ 2
KLHL35-204	ENST00000539798	SLCO1B3	Q9NPD5	702 aa		27.55	■■■□□ 2
KLHL35-204	ENST00000539798	USP15	Q9Y4E8	981 aa	Predicted RBP	27.55	■■■□□ 2
KLHL35-204	ENST00000539798	MKI67	P46013	3256 aa	Known RBP	27.54	■■■□□ 2
KLHL35-204	ENST00000539798	ABHD14A-ACY1	A0A1B0GW23	586 aa		27.54	■■■□□ 2
KLHL35-204	ENST00000539798	PSMD3	O43242	534 aa		27.54	■■■□□ 2
KLHL35-204	ENST00000539798	USP1	O94782	785 aa		27.54	■■■□□ 2
KLHL35-204	ENST00000539798	KIAA0754	O94854	1291 aa		27.54	■■■□□ 2
KLHL35-204	ENST00000539798	DSG1	Q02413	1049 aa		27.54	■■■□□ 2
KLHL35-204	ENST00000539798	FRG1	Q14331	258 aa	Known RBP	27.54	■■■□□ 2
KLHL35-204	ENST00000539798	SPRED3	Q2MJR0	410 aa		27.54	■■■□□ 2
KLHL35-204	ENST00000539798	ANKRD20A4	Q4UJ75	823 aa		27.54	■■■□□ 2
KLHL35-204	ENST00000539798	SNX30	Q5VWJ9	437 aa		27.54	■■■□□ 2
KLHL35-204	ENST00000539798	ZNF449	Q6P9G9	518 aa		27.54	■■■□□ 2
KLHL35-204	ENST00000539798	CIR1	Q86X95	450 aa	Predicted RBP	27.54	■■■□□ 2
KLHL35-204	ENST00000539798	ZNF75CP	Q92670	426 aa	Predicted RBP	27.54	■■■□□ 2
KLHL35-204	ENST00000539798	FAM111A	Q96PZ2	611 aa		27.54	■■■□□ 2
KLHL35-204	ENST00000539798	SRPK1	Q96SB4	655 aa	Known RBP	27.54	■■■□□ 2
KLHL35-204	ENST00000539798	MKS1	Q9NXB0	559 aa		27.54	■■■□□ 2
KLHL35-204	ENST00000539798	AAR2	Q9Y312	384 aa	Known RBP	27.54	■■■□□ 2
KLHL35-204	ENST00000539798	ATP9B	O43861	1147 aa		27.53	■■■□□ 2
KLHL35-204	ENST00000539798	CDH17	Q12864	832 aa		27.53	■■■□□ 2
KLHL35-204	ENST00000539798	DENND5A	Q6IQ26	1287 aa		27.53	■■■□□ 2
KLHL35-204	ENST00000539798	SPATA21	Q7Z572	469 aa		27.53	■■■□□ 2
KLHL35-204	ENST00000539798	ANKS4B	Q8N8V4	417 aa		27.53	■■■□□ 2
KLHL35-204	ENST00000539798	ZNF461	Q8TAF7	563 aa		27.53	■■■□□ 2
KLHL35-204	ENST00000539798	CCT6B	Q92526	530 aa		27.53	■■■□□ 2
KLHL35-204	ENST00000539798	CDKL2	Q92772	493 aa		27.53	■■■□□ 2
KLHL35-204	ENST00000539798	ZNF558	Q96NG5	402 aa		27.53	■■■□□ 2
KLHL35-204	ENST00000539798	PRKAG3	Q9UGI9	489 aa		27.53	■■■□□ 2
KLHL35-204	ENST00000539798	HBS1L	Q9Y450	684 aa	Known RBP	27.53	■■■□□ 2
KLHL35-204	ENST00000539798	FAM237B	A0A1B0GVD1	139 aa		27.53	■■■□□ 2
KLHL35-204	ENST00000539798	ZNF840P	A6NDX5	716 aa		27.53	■■■□□ 2
KLHL35-204	ENST00000539798		J3KR12	359 aa		27.53	■■■□□ 2
KLHL35-204	ENST00000539798	ADRA1A	P35348	466 aa		27.53	■■■□□ 2
KLHL35-204	ENST00000539798	SPOUT1	Q5T280	376 aa	Known RBP	27.53	■■■□□ 2
KLHL35-204	ENST00000539798	RASSF3	Q86WH2	238 aa		27.53	■■■□□ 2
KLHL35-204	ENST00000539798	SERBP1	Q8NC51	408 aa	Known RBP eCLIP	27.53	■■■□□ 2
KLHL35-204	ENST00000539798	LRRC8C	Q8TDW0	803 aa		27.53	■■■□□ 2
KLHL35-204	ENST00000539798	FATE1	Q969F0	183 aa		27.53	■■■□□ 2
KLHL35-204	ENST00000539798	MFSD3	Q96ES6	412 aa		27.53	■■■□□ 2
KLHL35-204	ENST00000539798	PITPNM3	Q9BZ71	974 aa		27.53	■■■□□ 2
KLHL35-204	ENST00000539798	IL22	Q9GZX6	179 aa		27.53	■■■□□ 2
KLHL35-204	ENST00000539798	VPS11	Q9H270	941 aa		27.53	■■■□□ 2
KLHL35-204	ENST00000539798	TRIM43B	A6NCK2	446 aa		27.52	■■■□□ 2
KLHL35-204	ENST00000539798	COPE	O14579	308 aa		27.52	■■■□□ 2
KLHL35-204	ENST00000539798	ANXA9	O76027	345 aa		27.52	■■■□□ 2
KLHL35-204	ENST00000539798	GJB5	O95377	273 aa		27.52	■■■□□ 2
KLHL35-204	ENST00000539798	CSF2RA	P15509	400 aa		27.52	■■■□□ 2
KLHL35-204	ENST00000539798	CNTF	P26441	200 aa		27.52	■■■□□ 2
KLHL35-204	ENST00000539798	RNF187	Q5TA31	235 aa	Predicted RBP	27.52	■■■□□ 2
KLHL35-204	ENST00000539798	LINC00523	Q86TU6	105 aa		27.52	■■■□□ 2
KLHL35-204	ENST00000539798	OTUD6B	Q8N6M0	293 aa		27.52	■■■□□ 2
KLHL35-204	ENST00000539798	TRIM43	Q96BQ3	446 aa	Predicted RBP	27.52	■■■□□ 2
KLHL35-204	ENST00000539798	TBL1Y	Q9BQ87	522 aa		27.52	■■■□□ 2
KLHL35-204	ENST00000539798	HERC2P3	Q9BVR0	1158 aa		27.52	■■■□□ 2
KLHL35-204	ENST00000539798	CHRAC1	Q9NRG0	131 aa		27.52	■■■□□ 2
KLHL35-204	ENST00000539798	DNMT3L	Q9UJW3	386 aa		27.52	■■■□□ 2
KLHL35-204	ENST00000539798	SOX13	Q9UN79	622 aa		27.52	■■■□□ 2
KLHL35-204	ENST00000539798	WDR91	A4D1P6	747 aa		27.51	■■■□□ 2
KLHL35-204	ENST00000539798	KPNA1	P52294	538 aa	Predicted RBP	27.51	■■■□□ 2
KLHL35-204	ENST00000539798	SEPT7	Q16181	437 aa	Known RBP	27.51	■■■□□ 2
KLHL35-204	ENST00000539798	CHSY1	Q86X52	802 aa		27.51	■■■□□ 2
KLHL35-204	ENST00000539798	IPMK	Q8NFU5	416 aa		27.51	■■■□□ 2
KLHL35-204	ENST00000539798	OVCA2	Q8WZ82	227 aa		27.51	■■■□□ 2

Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms