RNA–Protein interactions for RNA: ENST00000539241.1

CCND1-204, Transcript of cyclin D1, humanhuman

TSL 2

Gene CCND1, Length 920 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-204ENST00000539241 OLFML1Q6UWY5 402 aa14.39□□□□□ -0.11
CCND1-204ENST00000539241 FRS2Q8WU20 508 aa14.39□□□□□ -0.11
CCND1-204ENST00000539241 ELF4Q99607 663 aaPredicted RBP14.39□□□□□ -0.11
CCND1-204ENST00000539241 TPX2Q9ULW0 747 aaKnown RBP14.39□□□□□ -0.11
CCND1-204ENST00000539241 MYO6Q9UM54 1294 aa14.39□□□□□ -0.11
CCND1-204ENST00000539241 LHX6Q9UPM6 363 aa14.39□□□□□ -0.11
CCND1-204ENST00000539241 ANKRD11Q6UB99 2663 aaPredicted RBP14.39□□□□□ -0.11
CCND1-204ENST00000539241 A0A1W2PR77 199 aa14.38□□□□□ -0.11
CCND1-204ENST00000539241 DAB1O75553 588 aa14.38□□□□□ -0.11
CCND1-204ENST00000539241 ERBB2P04626 1255 aa14.38□□□□□ -0.11
CCND1-204ENST00000539241 PNMA6AP0CW24 399 aaPredicted RBP14.38□□□□□ -0.11
CCND1-204ENST00000539241 DRD3P35462 400 aa14.38□□□□□ -0.11
CCND1-204ENST00000539241 KRT9P35527 623 aa14.38□□□□□ -0.11
CCND1-204ENST00000539241 SOX5P35711 763 aa14.38□□□□□ -0.11
CCND1-204ENST00000539241 GGCXP38435 758 aa14.38□□□□□ -0.11
CCND1-204ENST00000539241 STAT1P42224 750 aa14.38□□□□□ -0.11
CCND1-204ENST00000539241 VASPP50552 380 aaPredicted RBP14.38□□□□□ -0.11
CCND1-204ENST00000539241 SNX16P57768 344 aa14.38□□□□□ -0.11
CCND1-204ENST00000539241 BPIFB4P59827 614 aa14.38□□□□□ -0.11
CCND1-204ENST00000539241 PPP2CBP62714 309 aa14.38□□□□□ -0.11
CCND1-204ENST00000539241 PPP2CAP67775 309 aa14.38□□□□□ -0.11
CCND1-204ENST00000539241 NME3Q13232 169 aa14.38□□□□□ -0.11
CCND1-204ENST00000539241 MTA1Q13330 715 aa14.38□□□□□ -0.11
CCND1-204ENST00000539241 PTPN20Q4JDL3 420 aa14.38□□□□□ -0.11
CCND1-204ENST00000539241 CCDC157Q569K6 752 aa14.38□□□□□ -0.11
CCND1-204ENST00000539241 PRAMEF14Q5SWL7 426 aa14.38□□□□□ -0.11
CCND1-204ENST00000539241 SPECC1LQ69YQ0 1117 aa14.38□□□□□ -0.11
CCND1-204ENST00000539241 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.38□□□□□ -0.11
CCND1-204ENST00000539241 SLC26A9Q7LBE3 791 aa14.38□□□□□ -0.11
CCND1-204ENST00000539241 VSTM4Q8IW00 320 aa14.38□□□□□ -0.11
CCND1-204ENST00000539241 GALNT15Q8N3T1 639 aa14.38□□□□□ -0.11
CCND1-204ENST00000539241 MDM1Q8TC05 714 aa14.38□□□□□ -0.11
CCND1-204ENST00000539241 OR8D1Q8WZ84 308 aa14.38□□□□□ -0.11
CCND1-204ENST00000539241 ALG14Q96F25 216 aa14.38□□□□□ -0.11
CCND1-204ENST00000539241 SERAC1Q96JX3 654 aa14.38□□□□□ -0.11
CCND1-204ENST00000539241 PPP1R9BQ96SB3 815 aa14.38□□□□□ -0.11
CCND1-204ENST00000539241 SYNCQ9H7C4 482 aa14.38□□□□□ -0.11
CCND1-204ENST00000539241 FTSJ1Q9UET6 329 aa14.38□□□□□ -0.11
CCND1-204ENST00000539241 SLC25A13Q9UJS0 675 aa14.38□□□□□ -0.11
CCND1-204ENST00000539241 VANGL2Q9ULK5 521 aa14.38□□□□□ -0.11
CCND1-204ENST00000539241 HS3ST4Q9Y661 456 aa14.38□□□□□ -0.11
CCND1-204ENST00000539241 TBC1D3DA0A087WVF3 549 aa14.37□□□□□ -0.11
CCND1-204ENST00000539241 TBC1D3IA0A087WXS9 549 aa14.37□□□□□ -0.11
CCND1-204ENST00000539241 TBC1D3EA0A087X179 549 aa14.37□□□□□ -0.11
CCND1-204ENST00000539241 TBC1D3KA0A087X1G2 549 aa14.37□□□□□ -0.11
CCND1-204ENST00000539241 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.37□□□□□ -0.11
CCND1-204ENST00000539241 A0A1W2PQJ5 194 aa14.37□□□□□ -0.11
CCND1-204ENST00000539241 TBC1D3FA6NER0 549 aaPredicted RBP14.37□□□□□ -0.11
CCND1-204ENST00000539241 TBC1D3LB9A6J9 549 aa14.37□□□□□ -0.11
CCND1-204ENST00000539241 PLK4O00444 970 aa14.37□□□□□ -0.11
CCND1-204ENST00000539241 WNT9AO14904 365 aa14.37□□□□□ -0.11
CCND1-204ENST00000539241 ATP9BO43861 1147 aa14.37□□□□□ -0.11
CCND1-204ENST00000539241 TBC1D3HP0C7X1 549 aa14.37□□□□□ -0.11
CCND1-204ENST00000539241 NOS2P35228 1153 aa14.37□□□□□ -0.11
CCND1-204ENST00000539241 CLCN1P35523 988 aa14.37□□□□□ -0.11
CCND1-204ENST00000539241 IRAK1P51617 712 aa14.37□□□□□ -0.11
CCND1-204ENST00000539241 ZNF75DP51815 510 aa14.37□□□□□ -0.11
CCND1-204ENST00000539241 METAP1P53582 386 aa14.37□□□□□ -0.11
CCND1-204ENST00000539241 SLC6A3Q01959 620 aa14.37□□□□□ -0.11
CCND1-204ENST00000539241 ZNF177Q13360 481 aaPredicted RBP14.37□□□□□ -0.11
CCND1-204ENST00000539241 TRIM14Q14142 442 aa14.37□□□□□ -0.11
CCND1-204ENST00000539241 ACCSLQ4AC99 568 aa14.37□□□□□ -0.11
CCND1-204ENST00000539241 FAM46CQ5VWP2 391 aa14.37□□□□□ -0.11
CCND1-204ENST00000539241 TBC1D3GQ6DHY5 549 aa14.37□□□□□ -0.11
CCND1-204ENST00000539241 TBC1D3CQ6IPX1 549 aa14.37□□□□□ -0.11
CCND1-204ENST00000539241 DSG4Q86SJ6 1040 aa14.37□□□□□ -0.11
CCND1-204ENST00000539241 C14orf80Q86SX3 495 aa14.37□□□□□ -0.11
CCND1-204ENST00000539241 SLC47A2Q86VL8 602 aa14.37□□□□□ -0.11
CCND1-204ENST00000539241 MARCH9Q86YJ5 346 aa14.37□□□□□ -0.11
CCND1-204ENST00000539241 GATAD2AQ86YP4 633 aa14.37□□□□□ -0.11
CCND1-204ENST00000539241 TBC1D3Q8IZP1 549 aaPredicted RBP14.37□□□□□ -0.11
CCND1-204ENST00000539241 ZNF397Q8NF99 534 aaPredicted RBP14.37□□□□□ -0.11
CCND1-204ENST00000539241 OR52K2Q8NGK3 314 aa14.37□□□□□ -0.11
CCND1-204ENST00000539241 BAP1Q92560 729 aa14.37□□□□□ -0.11
CCND1-204ENST00000539241 MRFAP1L1Q96HT8 127 aa14.37□□□□□ -0.11
CCND1-204ENST00000539241 FEM1AQ9BSK4 669 aa14.37□□□□□ -0.11
CCND1-204ENST00000539241 GDF3Q9NR23 364 aa14.37□□□□□ -0.11
CCND1-204ENST00000539241 VPS28Q9UK41 221 aa14.37□□□□□ -0.11
CCND1-204ENST00000539241 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.37□□□□□ -0.112e-9■□□□□ 9
CCND1-204ENST00000539241 C1QTNF3-AMACRE9PGA6 284 aa14.36□□□□□ -0.11
CCND1-204ENST00000539241 M0QYT0 321 aa14.36□□□□□ -0.11
CCND1-204ENST00000539241 YKT6O15498 198 aa14.36□□□□□ -0.11
CCND1-204ENST00000539241 SLC7A4O43246 635 aa14.36□□□□□ -0.11
CCND1-204ENST00000539241 LATO43561 262 aa14.36□□□□□ -0.11
CCND1-204ENST00000539241 RTN2O75298 545 aa14.36□□□□□ -0.11
CCND1-204ENST00000539241 PAGE1O75459 146 aa14.36□□□□□ -0.11
CCND1-204ENST00000539241 CLDN11O75508 207 aa14.36□□□□□ -0.11
CCND1-204ENST00000539241 GYPCP04921 128 aa14.36□□□□□ -0.11
CCND1-204ENST00000539241 ITGAVP06756 1048 aa14.36□□□□□ -0.11
CCND1-204ENST00000539241 CDH4P55283 916 aa14.36□□□□□ -0.11
CCND1-204ENST00000539241 SHBQ15464 509 aa14.36□□□□□ -0.11
CCND1-204ENST00000539241 DLG2Q15700 870 aa14.36□□□□□ -0.11
CCND1-204ENST00000539241 SMAD1Q15797 465 aaKnown RBP14.36□□□□□ -0.11
CCND1-204ENST00000539241 SLC45A4Q5BKX6 768 aa14.36□□□□□ -0.11
CCND1-204ENST00000539241 OTUD1Q5VV17 481 aaPredicted RBP14.36□□□□□ -0.11
CCND1-204ENST00000539241 DHRS13Q6UX07 377 aa14.36□□□□□ -0.11
CCND1-204ENST00000539241 Q6ZVU0 165 aa14.36□□□□□ -0.11
CCND1-204ENST00000539241 PRPF39Q86UA1 669 aaKnown RBP14.36□□□□□ -0.11
CCND1-204ENST00000539241 SAP25Q8TEE9 199 aa14.36□□□□□ -0.11
CCND1-204ENST00000539241 FAM131CQ96AQ9 280 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms