RNA–Protein interactions for RNA: ENST00000538933.1

CLSTN3-208, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-208ENST00000538933 IL17BQ9UHF5 180 aa12.92□□□□□ -0.34
CLSTN3-208ENST00000538933 CLEC4EQ9ULY5 219 aa12.92□□□□□ -0.34
CLSTN3-208ENST00000538933 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.92□□□□□ -0.34
CLSTN3-208ENST00000538933 C10orf142B7Z368 130 aa12.91□□□□□ -0.34
CLSTN3-208ENST00000538933 XPO1O14980 1071 aaKnown RBP12.91□□□□□ -0.34
CLSTN3-208ENST00000538933 CYP1A1P04798 512 aaPredicted RBP12.91□□□□□ -0.34
CLSTN3-208ENST00000538933 H2AFZP0C0S5 128 aa12.91□□□□□ -0.34
CLSTN3-208ENST00000538933 CCDC175P0C221 793 aa12.91□□□□□ -0.34
CLSTN3-208ENST00000538933 GZMAP12544 262 aa12.91□□□□□ -0.34
CLSTN3-208ENST00000538933 GLDCP23378 1020 aa12.91□□□□□ -0.34
CLSTN3-208ENST00000538933 ACADSBP45954 432 aa12.91□□□□□ -0.34
CLSTN3-208ENST00000538933 RGS7P49802 495 aa12.91□□□□□ -0.34
CLSTN3-208ENST00000538933 UCNP55089 124 aa12.91□□□□□ -0.34
CLSTN3-208ENST00000538933 RACK1P63244 317 aaKnown RBP12.91□□□□□ -0.34
CLSTN3-208ENST00000538933 NOMO3P69849 1222 aa12.91□□□□□ -0.34
CLSTN3-208ENST00000538933 INSM1Q01101 510 aaPredicted RBP12.91□□□□□ -0.34
CLSTN3-208ENST00000538933 PDE4CQ08493 712 aa12.91□□□□□ -0.34
CLSTN3-208ENST00000538933 ILKQ13418 452 aa12.91□□□□□ -0.34
CLSTN3-208ENST00000538933 HS1BP3Q53T59 392 aa12.91□□□□□ -0.34
CLSTN3-208ENST00000538933 ACAD10Q6JQN1 1059 aa12.91□□□□□ -0.34
CLSTN3-208ENST00000538933 H2AFVQ71UI9 128 aa12.91□□□□□ -0.34
CLSTN3-208ENST00000538933 KANSL1Q7Z3B3 1105 aa12.91□□□□□ -0.34
CLSTN3-208ENST00000538933 EID2Q8N6I1 236 aa12.91□□□□□ -0.34
CLSTN3-208ENST00000538933 OR2T3Q8NH03 318 aa12.91□□□□□ -0.34
CLSTN3-208ENST00000538933 SLC30A5Q8TAD4 765 aa12.91□□□□□ -0.34
CLSTN3-208ENST00000538933 CTNNBL1Q8WYA6 563 aaPredicted RBP12.91□□□□□ -0.34
CLSTN3-208ENST00000538933 TRIM11Q96F44 468 aa12.91□□□□□ -0.34
CLSTN3-208ENST00000538933 NAF1Q96HR8 494 aaKnown RBP12.91□□□□□ -0.34
CLSTN3-208ENST00000538933 PCDHB18PQ96TA0 734 aa12.91□□□□□ -0.34
CLSTN3-208ENST00000538933 LGMNQ99538 433 aa12.91□□□□□ -0.34
CLSTN3-208ENST00000538933 ZSWIM1Q9BR11 485 aa12.91□□□□□ -0.34
CLSTN3-208ENST00000538933 C11orf70Q9BRQ4 267 aa12.91□□□□□ -0.34
CLSTN3-208ENST00000538933 DESI2Q9BSY9 194 aa12.91□□□□□ -0.34
CLSTN3-208ENST00000538933 SYT11Q9BT88 431 aa12.91□□□□□ -0.34
CLSTN3-208ENST00000538933 NACA2Q9H009 215 aa12.91□□□□□ -0.34
CLSTN3-208ENST00000538933 EBF2Q9HAK2 575 aa12.91□□□□□ -0.34
CLSTN3-208ENST00000538933 ADAM22Q9P0K1 906 aa12.91□□□□□ -0.34
CLSTN3-208ENST00000538933 NAGPAQ9UK23 515 aa12.91□□□□□ -0.34
CLSTN3-208ENST00000538933 CLCA2Q9UQC9 943 aa12.91□□□□□ -0.34
CLSTN3-208ENST00000538933 CCP110O43303 1012 aa12.9□□□□□ -0.34
CLSTN3-208ENST00000538933 ZSCAN12O43309 604 aa12.9□□□□□ -0.34
CLSTN3-208ENST00000538933 BEST1O76090 585 aa12.9□□□□□ -0.34
CLSTN3-208ENST00000538933 FSBPO95073 299 aa12.9□□□□□ -0.34
CLSTN3-208ENST00000538933 FTLP02792 175 aaPredicted RBP12.9□□□□□ -0.34
CLSTN3-208ENST00000538933 CALB1P05937 261 aa12.9□□□□□ -0.34
CLSTN3-208ENST00000538933 EPHX1P07099 455 aa12.9□□□□□ -0.34
CLSTN3-208ENST00000538933 ABCB4P21439 1286 aa12.9□□□□□ -0.34
CLSTN3-208ENST00000538933 ATP5C1P36542 298 aaKnown RBP12.9□□□□□ -0.34
CLSTN3-208ENST00000538933 GPD2P43304 727 aa12.9□□□□□ -0.34
CLSTN3-208ENST00000538933 CENPCQ03188 943 aa12.9□□□□□ -0.34
CLSTN3-208ENST00000538933 PDCLQ13371 301 aa12.9□□□□□ -0.34
CLSTN3-208ENST00000538933 ASTE1Q2TB18 679 aaPredicted RBP12.9□□□□□ -0.34
CLSTN3-208ENST00000538933 CLEC20AQ6ZU45 233 aa12.9□□□□□ -0.34
CLSTN3-208ENST00000538933 SIX6OS1Q8N1H7 587 aa12.9□□□□□ -0.34
CLSTN3-208ENST00000538933 ACRBPQ8NEB7 543 aa12.9□□□□□ -0.34
CLSTN3-208ENST00000538933 UCMAQ8WVF2 138 aa12.9□□□□□ -0.34
CLSTN3-208ENST00000538933 PPP1R13BQ96KQ4 1090 aa12.9□□□□□ -0.34
CLSTN3-208ENST00000538933 SMOQ99835 787 aa12.9□□□□□ -0.34
CLSTN3-208ENST00000538933 TMEM245Q9H330 911 aa12.9□□□□□ -0.34
CLSTN3-208ENST00000538933 LSM7Q9UK45 103 aaKnown RBP12.9□□□□□ -0.34
CLSTN3-208ENST00000538933 STRIP2Q9ULQ0 834 aa12.9□□□□□ -0.34
CLSTN3-208ENST00000538933 PCDHA13Q9Y5I0 950 aa12.9□□□□□ -0.34
CLSTN3-208ENST00000538933 NOTCH2Q04721 2471 aa12.9□□□□□ -0.34
CLSTN3-208ENST00000538933 DOCK9Q9BZ29 2069 aa12.89□□□□□ -0.35
CLSTN3-208ENST00000538933 ITPR2Q14571 2701 aa12.89□□□□□ -0.35
CLSTN3-208ENST00000538933 WNT9AO14904 365 aa12.89□□□□□ -0.35
CLSTN3-208ENST00000538933 STC2O76061 302 aa12.89□□□□□ -0.35
CLSTN3-208ENST00000538933 ITGAVP06756 1048 aa12.89□□□□□ -0.35
CLSTN3-208ENST00000538933 MYBL1P10243 752 aa12.89□□□□□ -0.35
CLSTN3-208ENST00000538933 UNGP13051 313 aaPredicted RBP12.89□□□□□ -0.35
CLSTN3-208ENST00000538933 LCP1P13796 627 aa12.89□□□□□ -0.35
CLSTN3-208ENST00000538933 CDH5P33151 784 aaPredicted RBP12.89□□□□□ -0.35
CLSTN3-208ENST00000538933 PLA2G4AP47712 749 aa12.89□□□□□ -0.35
CLSTN3-208ENST00000538933 NAP1L1P55209 391 aaKnown RBP12.89□□□□□ -0.35
CLSTN3-208ENST00000538933 PCBP4P57723 403 aaKnown RBP12.89□□□□□ -0.35
CLSTN3-208ENST00000538933 RPS14P62263 151 aaKnown RBP12.89□□□□□ -0.35
CLSTN3-208ENST00000538933 VAC14Q08AM6 782 aa12.89□□□□□ -0.35
CLSTN3-208ENST00000538933 BNIP3Q12983 259 aa12.89□□□□□ -0.35
CLSTN3-208ENST00000538933 EIF4HQ15056 248 aaKnown RBP12.89□□□□□ -0.35
CLSTN3-208ENST00000538933 KLHDC10Q6PID8 442 aa12.89□□□□□ -0.35
CLSTN3-208ENST00000538933 MMS22LQ6ZRQ5 1243 aa12.89□□□□□ -0.35
CLSTN3-208ENST00000538933 PIGZQ86VD9 579 aa12.89□□□□□ -0.35
CLSTN3-208ENST00000538933 ZNF653Q96CK0 615 aa12.89□□□□□ -0.35
CLSTN3-208ENST00000538933 C18orf8Q96DM3 657 aa12.89□□□□□ -0.35
CLSTN3-208ENST00000538933 ZNF578Q96N58 590 aaPredicted RBP12.89□□□□□ -0.35
CLSTN3-208ENST00000538933 SLC6A18Q96N87 628 aa12.89□□□□□ -0.35
CLSTN3-208ENST00000538933 ACE2Q9BYF1 805 aaPredicted RBP12.89□□□□□ -0.35
CLSTN3-208ENST00000538933 BTBD1Q9H0C5 482 aa12.89□□□□□ -0.35
CLSTN3-208ENST00000538933 NMUR1Q9HB89 426 aa12.89□□□□□ -0.35
CLSTN3-208ENST00000538933 CSNK1G1Q9HCP0 422 aa12.89□□□□□ -0.35
CLSTN3-208ENST00000538933 TLR8Q9NR97 1041 aaKnown RBP12.89□□□□□ -0.35
CLSTN3-208ENST00000538933 TAS2R14Q9NYV8 317 aa12.89□□□□□ -0.35
CLSTN3-208ENST00000538933 MYO1AQ9UBC5 1043 aa12.89□□□□□ -0.35
CLSTN3-208ENST00000538933 PCDHB1Q9Y5F3 818 aa12.89□□□□□ -0.35
CLSTN3-208ENST00000538933 A0A1W2PPC4 97 aa12.88□□□□□ -0.35
CLSTN3-208ENST00000538933 A0A1W2PR77 199 aa12.88□□□□□ -0.35
CLSTN3-208ENST00000538933 ANKRD62A6NC57 917 aa12.88□□□□□ -0.35
CLSTN3-208ENST00000538933 PIK3R2O00459 728 aa12.88□□□□□ -0.35
CLSTN3-208ENST00000538933 MDM4O15151 490 aa12.88□□□□□ -0.35
CLSTN3-208ENST00000538933 TIMM44O43615 452 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms