RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 CEP41Q9BYV8 373 aa9.45□□□□□ -0.9
DDB1-211ENST00000538280 SLC13A1Q9BZW2 595 aa9.45□□□□□ -0.9
DDB1-211ENST00000538280 WWP1Q9H0M0 922 aa9.45□□□□□ -0.9
DDB1-211ENST00000538280 NKX2-4Q9H2Z4 354 aa9.45□□□□□ -0.9
DDB1-211ENST00000538280 STN1Q9H668 368 aaKnown RBP9.45□□□□□ -0.9
DDB1-211ENST00000538280 THAP1Q9NVV9 213 aa9.45□□□□□ -0.9
DDB1-211ENST00000538280 DDIT4Q9NX09 232 aa9.45□□□□□ -0.9
DDB1-211ENST00000538280 ARHGEF38Q9NXL2 777 aa9.45□□□□□ -0.9
DDB1-211ENST00000538280 NOP53Q9NZM5 478 aaKnown RBP9.45□□□□□ -0.9
DDB1-211ENST00000538280 COX16Q9P0S2 106 aa9.45□□□□□ -0.9
DDB1-211ENST00000538280 KLHL8Q9P2G9 620 aaPredicted RBP9.45□□□□□ -0.9
DDB1-211ENST00000538280 SLC17A6Q9P2U8 582 aa9.45□□□□□ -0.9
DDB1-211ENST00000538280 DCDC2Q9UHG0 476 aa9.45□□□□□ -0.9
DDB1-211ENST00000538280 DSEQ9UL01 958 aa9.45□□□□□ -0.9
DDB1-211ENST00000538280 C15orf41Q9Y2V0 281 aa9.45□□□□□ -0.9
DDB1-211ENST00000538280 FAM237BA0A1B0GVD1 139 aa9.44□□□□□ -0.9
DDB1-211ENST00000538280 CASTOR2A6NHX0 329 aa9.44□□□□□ -0.9
DDB1-211ENST00000538280 KCNK1O00180 336 aa9.44□□□□□ -0.9
DDB1-211ENST00000538280 AP3B1O00203 1094 aa9.44□□□□□ -0.9
DDB1-211ENST00000538280 ZBTB24O43167 697 aaPredicted RBP9.44□□□□□ -0.9
DDB1-211ENST00000538280 IRAK2O43187 625 aa9.44□□□□□ -0.9
DDB1-211ENST00000538280 PSMD3O43242 534 aa9.44□□□□□ -0.9
DDB1-211ENST00000538280 CCDC22O60826 627 aa9.44□□□□□ -0.9
DDB1-211ENST00000538280 ASGR1P07306 291 aa9.44□□□□□ -0.9
DDB1-211ENST00000538280 C6orf222P0C671 652 aaPredicted RBP9.44□□□□□ -0.9
DDB1-211ENST00000538280 NEFHP12036 1026 aa9.44□□□□□ -0.9
DDB1-211ENST00000538280 MYOGP15173 224 aa9.44□□□□□ -0.9
DDB1-211ENST00000538280 GNAZP19086 355 aa9.44□□□□□ -0.9
DDB1-211ENST00000538280 TYMPP19971 482 aa9.44□□□□□ -0.9
DDB1-211ENST00000538280 CST5P28325 142 aaPredicted RBP9.44□□□□□ -0.9
DDB1-211ENST00000538280 EPHB2P29323 1055 aa9.44□□□□□ -0.9
DDB1-211ENST00000538280 LIMK2P53671 638 aa9.44□□□□□ -0.9
DDB1-211ENST00000538280 CRADDP78560 199 aa9.44□□□□□ -0.9
DDB1-211ENST00000538280 NRG1Q02297 640 aaPredicted RBP9.44□□□□□ -0.9
DDB1-211ENST00000538280 STX3Q13277 289 aa9.44□□□□□ -0.9
DDB1-211ENST00000538280 TUSC3Q13454 348 aa9.44□□□□□ -0.9
DDB1-211ENST00000538280 TUBB3Q13509 450 aa9.44□□□□□ -0.9
DDB1-211ENST00000538280 E2F5Q15329 346 aa9.44□□□□□ -0.9
DDB1-211ENST00000538280 TBCCQ15814 346 aa9.44□□□□□ -0.9
DDB1-211ENST00000538280 TRIM71Q2Q1W2 868 aaKnown RBP9.44□□□□□ -0.9
DDB1-211ENST00000538280 ANKRD20A4Q4UJ75 823 aa9.44□□□□□ -0.9
DDB1-211ENST00000538280 BRMS1LQ5PSV4 323 aa9.44□□□□□ -0.9
DDB1-211ENST00000538280 N4BP2L1Q5TBK1 243 aaPredicted RBP9.44□□□□□ -0.9
DDB1-211ENST00000538280 CLEC14AQ86T13 490 aa9.44□□□□□ -0.9
DDB1-211ENST00000538280 ZNF598Q86UK7 904 aaKnown RBP9.44□□□□□ -0.9
DDB1-211ENST00000538280 RASSF3Q86WH2 238 aa9.44□□□□□ -0.9
DDB1-211ENST00000538280 METTL23Q86XA0 190 aa9.44□□□□□ -0.9
DDB1-211ENST00000538280 CRLF3Q8IUI8 442 aa9.44□□□□□ -0.9
DDB1-211ENST00000538280 CCDC117Q8IWD4 279 aaPredicted RBP9.44□□□□□ -0.9
DDB1-211ENST00000538280 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.44□□□□□ -0.9
DDB1-211ENST00000538280 OR52K1Q8NGK4 314 aa9.44□□□□□ -0.9
DDB1-211ENST00000538280 ADAM32Q8TC27 787 aa9.44□□□□□ -0.9
DDB1-211ENST00000538280 SUSD3Q96L08 255 aa9.44□□□□□ -0.9
DDB1-211ENST00000538280 ZNF778Q96MU6 729 aa9.44□□□□□ -0.9
DDB1-211ENST00000538280 TOX2Q96NM4 488 aa9.44□□□□□ -0.9
DDB1-211ENST00000538280 ANKRD27Q96NW4 1050 aa9.44□□□□□ -0.9
DDB1-211ENST00000538280 ASB2Q96Q27 587 aa9.44□□□□□ -0.9
DDB1-211ENST00000538280 PAAF1Q9BRP4 392 aa9.44□□□□□ -0.9
DDB1-211ENST00000538280 BTBD10Q9BSF8 475 aa9.44□□□□□ -0.9
DDB1-211ENST00000538280 TSEN34Q9BSV6 310 aaKnown RBP9.44□□□□□ -0.9
DDB1-211ENST00000538280 CCDC106Q9BWC9 280 aa9.44□□□□□ -0.9
DDB1-211ENST00000538280 CADM1Q9BY67 442 aaKnown RBP9.44□□□□□ -0.9
DDB1-211ENST00000538280 C20orf27Q9GZN8 174 aa9.44□□□□□ -0.9
DDB1-211ENST00000538280 TKTL2Q9H0I9 626 aa9.44□□□□□ -0.9
DDB1-211ENST00000538280 MMADHCQ9H3L0 296 aaPredicted RBP9.44□□□□□ -0.9
DDB1-211ENST00000538280 YY1AP1Q9H869 796 aa9.44□□□□□ -0.9
DDB1-211ENST00000538280 RNPEPL1Q9HAU8 725 aa9.44□□□□□ -0.9
DDB1-211ENST00000538280 DMAP1Q9NPF5 467 aaPredicted RBP9.44□□□□□ -0.9
DDB1-211ENST00000538280 FBXO6Q9NRD1 293 aaPredicted RBP9.44□□□□□ -0.9
DDB1-211ENST00000538280 TMLHEQ9NVH6 421 aa9.44□□□□□ -0.9
DDB1-211ENST00000538280 SEPT10Q9P0V9 454 aa9.44□□□□□ -0.9
DDB1-211ENST00000538280 THEGQ9P2T0 379 aa9.44□□□□□ -0.9
DDB1-211ENST00000538280 SOX13Q9UN79 622 aa9.44□□□□□ -0.9
DDB1-211ENST00000538280 TIMM13Q9Y5L4 95 aaPredicted RBP9.44□□□□□ -0.9
DDB1-211ENST00000538280 PSAT1Q9Y617 370 aa9.44□□□□□ -0.9
DDB1-211ENST00000538280 SQORQ9Y6N5 450 aa9.44□□□□□ -0.9
DDB1-211ENST00000538280 BDP1A6H8Y1 2624 aa9.44□□□□□ -0.9
DDB1-211ENST00000538280 MYO16Q9Y6X6 1858 aa9.43□□□□□ -0.9
DDB1-211ENST00000538280 A0A0U1RQF3 1178 aa9.43□□□□□ -0.9
DDB1-211ENST00000538280 MAGEB16A2A368 324 aa9.43□□□□□ -0.9
DDB1-211ENST00000538280 MOXD2PA6NHM9 499 aa9.43□□□□□ -0.9
DDB1-211ENST00000538280 F5H423 210 aaPredicted RBP9.43□□□□□ -0.9
DDB1-211ENST00000538280 TNFRSF10BO14763 440 aa9.43□□□□□ -0.9
DDB1-211ENST00000538280 GSC2O15499 205 aa9.43□□□□□ -0.9
DDB1-211ENST00000538280 LRIG2O94898 1065 aa9.43□□□□□ -0.9
DDB1-211ENST00000538280 TOP3BO95985 862 aaKnown RBP9.43□□□□□ -0.9
DDB1-211ENST00000538280 SERPINE1P05121 402 aa9.43□□□□□ -0.9
DDB1-211ENST00000538280 CTSHP09668 335 aa9.43□□□□□ -0.9
DDB1-211ENST00000538280 SKIP12755 728 aa9.43□□□□□ -0.9
DDB1-211ENST00000538280 GM2AP17900 193 aa9.43□□□□□ -0.9
DDB1-211ENST00000538280 NFKB1P19838 968 aa9.43□□□□□ -0.9
DDB1-211ENST00000538280 BRCC3P46736 316 aa9.43□□□□□ -0.9
DDB1-211ENST00000538280 HARS2P49590 506 aaKnown RBP9.43□□□□□ -0.9
DDB1-211ENST00000538280 SERPINB8P50452 374 aa9.43□□□□□ -0.9
DDB1-211ENST00000538280 COG7P83436 770 aa9.43□□□□□ -0.9
DDB1-211ENST00000538280 TFF2Q03403 129 aa9.43□□□□□ -0.9
DDB1-211ENST00000538280 LPIN1Q14693 890 aa9.43□□□□□ -0.9
DDB1-211ENST00000538280 MAPRE1Q15691 268 aaKnown RBP9.43□□□□□ -0.9
DDB1-211ENST00000538280 CCDC153Q494R4 210 aa9.43□□□□□ -0.9
DDB1-211ENST00000538280 ACCSLQ4AC99 568 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms