RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 UVRAGQ9P2Y5 699 aa7.4□□□□□ -1.22
MSH6-209ENST00000538136 COQ4Q9Y3A0 265 aa7.4□□□□□ -1.22
MSH6-209ENST00000538136 TTC34A8MYJ7 566 aa7.4□□□□□ -1.23
MSH6-209ENST00000538136 PPP1R12AO14974 1030 aaPredicted RBP7.4□□□□□ -1.23
MSH6-209ENST00000538136 LATO43561 262 aa7.4□□□□□ -1.23
MSH6-209ENST00000538136 FAM189A1O60320 539 aa7.4□□□□□ -1.23
MSH6-209ENST00000538136 ECEL1O95672 775 aa7.4□□□□□ -1.23
MSH6-209ENST00000538136 IL1R2P27930 398 aa7.4□□□□□ -1.23
MSH6-209ENST00000538136 PDE1BQ01064 536 aa7.4□□□□□ -1.23
MSH6-209ENST00000538136 NNTQ13423 1086 aa7.4□□□□□ -1.23
MSH6-209ENST00000538136 THOC5Q13769 683 aaKnown RBP7.4□□□□□ -1.23
MSH6-209ENST00000538136 SLMAPQ14BN4 828 aa7.4□□□□□ -1.23
MSH6-209ENST00000538136 MPPE1Q53F39 396 aa7.4□□□□□ -1.23
MSH6-209ENST00000538136 CCDC137Q6PK04 289 aaKnown RBP7.4□□□□□ -1.23
MSH6-209ENST00000538136 TXNDC11Q6PKC3 985 aa7.4□□□□□ -1.23
MSH6-209ENST00000538136 TRIM74Q86UV6 250 aa7.4□□□□□ -1.23
MSH6-209ENST00000538136 STK40Q8N2I9 435 aa7.4□□□□□ -1.23
MSH6-209ENST00000538136 NECTIN4Q96NY8 510 aa7.4□□□□□ -1.23
MSH6-209ENST00000538136 YIPF2Q9BWQ6 316 aa7.4□□□□□ -1.23
MSH6-209ENST00000538136 AIPL1Q9NZN9 384 aa7.4□□□□□ -1.23
MSH6-209ENST00000538136 DAAM1Q9Y4D1 1078 aa7.4□□□□□ -1.23
MSH6-209ENST00000538136 ASB3Q9Y575 518 aa7.4□□□□□ -1.23
MSH6-209ENST00000538136 ARAP2Q8WZ64 1704 aa7.4□□□□□ -1.23
MSH6-209ENST00000538136 SCN1AP35498 2009 aa7.4□□□□□ -1.23
MSH6-209ENST00000538136 SSU72P8A0A1W2PR75 194 aa7.39□□□□□ -1.23
MSH6-209ENST00000538136 TCRBV7S2A1N4TA0A589 114 aa7.39□□□□□ -1.23
MSH6-209ENST00000538136 GOLGA6L10A6NI86 522 aa7.39□□□□□ -1.23
MSH6-209ENST00000538136 C3orf70A6NLC5 250 aaPredicted RBP7.39□□□□□ -1.23
MSH6-209ENST00000538136 IRAK2O43187 625 aa7.39□□□□□ -1.23
MSH6-209ENST00000538136 MBTPS2O43462 519 aa7.39□□□□□ -1.23
MSH6-209ENST00000538136 PIGNO95427 931 aa7.39□□□□□ -1.23
MSH6-209ENST00000538136 LSM8O95777 96 aaKnown RBP7.39□□□□□ -1.23
MSH6-209ENST00000538136 KLKB1P03952 638 aa7.39□□□□□ -1.23
MSH6-209ENST00000538136 CTSEP14091 401 aa7.39□□□□□ -1.23
MSH6-209ENST00000538136 KRT15P19012 456 aa7.39□□□□□ -1.23
MSH6-209ENST00000538136 CHRNA4P43681 627 aa7.39□□□□□ -1.23
MSH6-209ENST00000538136 PAPOLAP51003 745 aaKnown RBP7.39□□□□□ -1.23
MSH6-209ENST00000538136 ZNF143P52747 638 aaPredicted RBP7.39□□□□□ -1.23
MSH6-209ENST00000538136 HSP90B2PQ58FF3 399 aa7.39□□□□□ -1.23
MSH6-209ENST00000538136 FSCBQ5H9T9 825 aa7.39□□□□□ -1.23
MSH6-209ENST00000538136 TRIM67Q6ZTA4 783 aa7.39□□□□□ -1.23
MSH6-209ENST00000538136 SLC44A3Q8N4M1 653 aa7.39□□□□□ -1.23
MSH6-209ENST00000538136 VN1R2Q8NFZ6 395 aa7.39□□□□□ -1.23
MSH6-209ENST00000538136 PRCCQ92733 491 aaPredicted RBP7.39□□□□□ -1.23
MSH6-209ENST00000538136 PLA2G2FQ9BZM2 168 aa7.39□□□□□ -1.23
MSH6-209ENST00000538136 ABCG4Q9H172 646 aa7.39□□□□□ -1.23
MSH6-209ENST00000538136 WDR6Q9NNW5 1121 aaKnown RBP7.39□□□□□ -1.23
MSH6-209ENST00000538136 HS3ST4Q9Y661 456 aa7.39□□□□□ -1.23
MSH6-209ENST00000538136 ATAD5Q96QE3 1844 aa7.39□□□□□ -1.23
MSH6-209ENST00000538136 LRRC10BA6NIK2 292 aa7.39□□□□□ -1.23
MSH6-209ENST00000538136 TTI1O43156 1089 aa7.39□□□□□ -1.23
MSH6-209ENST00000538136 TRIM16O95361 564 aa7.39□□□□□ -1.23
MSH6-209ENST00000538136 HPDP32754 393 aaPredicted RBP7.39□□□□□ -1.23
MSH6-209ENST00000538136 PSEN1P49768 467 aa7.39□□□□□ -1.23
MSH6-209ENST00000538136 DSC2Q02487 901 aa7.39□□□□□ -1.23
MSH6-209ENST00000538136 SLC12A1Q13621 1099 aa7.39□□□□□ -1.23
MSH6-209ENST00000538136 LRIT3Q3SXY7 679 aa7.39□□□□□ -1.23
MSH6-209ENST00000538136 DGKKQ5KSL6 1271 aa7.39□□□□□ -1.23
MSH6-209ENST00000538136 RFX8Q6ZV50 586 aa7.39□□□□□ -1.23
MSH6-209ENST00000538136 LDB1Q86U70 411 aaPredicted RBP7.39□□□□□ -1.23
MSH6-209ENST00000538136 GPATCH11Q8N954 259 aa7.39□□□□□ -1.23
MSH6-209ENST00000538136 CLP1Q92989 425 aaKnown RBP7.39□□□□□ -1.23
MSH6-209ENST00000538136 SH3KBP1Q96B97 665 aa7.39□□□□□ -1.23
MSH6-209ENST00000538136 ZNF689Q96CS4 500 aaPredicted RBP7.39□□□□□ -1.23
MSH6-209ENST00000538136 PNKPQ96T60 521 aa7.39□□□□□ -1.23
MSH6-209ENST00000538136 NAP1L3Q99457 506 aaPredicted RBP7.39□□□□□ -1.23
MSH6-209ENST00000538136 NOCTQ9UK39 431 aaKnown RBP7.39□□□□□ -1.23
MSH6-209ENST00000538136 SLC30A1Q9Y6M5 507 aa7.39□□□□□ -1.23
MSH6-209ENST00000538136 LAMA4Q16363 1823 aa7.39□□□□□ -1.23
MSH6-209ENST00000538136 MICAL3Q7RTP6 2002 aa7.39□□□□□ -1.23
MSH6-209ENST00000538136 GRID2IPA4D2P6 1211 aa7.39□□□□□ -1.23
MSH6-209ENST00000538136 GRXCR2A6NFK2 248 aa7.39□□□□□ -1.23
MSH6-209ENST00000538136 ZSCAN5CA6NGD5 496 aaPredicted RBP7.39□□□□□ -1.23
MSH6-209ENST00000538136 ALPIP09923 528 aa7.39□□□□□ -1.23
MSH6-209ENST00000538136 MYBL1P10243 752 aa7.39□□□□□ -1.23
MSH6-209ENST00000538136 GZMAP12544 262 aa7.39□□□□□ -1.23
MSH6-209ENST00000538136 MX2P20592 715 aa7.39□□□□□ -1.23
MSH6-209ENST00000538136 GJA4P35212 333 aa7.39□□□□□ -1.23
MSH6-209ENST00000538136 MARSP56192 900 aaKnown RBP7.39□□□□□ -1.23
MSH6-209ENST00000538136 HDAC4P56524 1084 aa7.39□□□□□ -1.23
MSH6-209ENST00000538136 CCZ1BP86790 482 aa7.39□□□□□ -1.23
MSH6-209ENST00000538136 CCZ1P86791 482 aaPredicted RBP7.39□□□□□ -1.23
MSH6-209ENST00000538136 TTC31Q49AM3 519 aaPredicted RBP7.39□□□□□ -1.23
MSH6-209ENST00000538136 RAET1GQ6H3X3 334 aa7.39□□□□□ -1.23
MSH6-209ENST00000538136 MTSS1LQ765P7 747 aa7.39□□□□□ -1.23
MSH6-209ENST00000538136 TRAPPC5Q8IUR0 188 aa7.39□□□□□ -1.23
MSH6-209ENST00000538136 NDUFAF2Q8N183 169 aa7.39□□□□□ -1.23
MSH6-209ENST00000538136 TFB1MQ8WVM0 346 aaKnown RBP7.39□□□□□ -1.23
MSH6-209ENST00000538136 IQCDQ96DY2 449 aa7.39□□□□□ -1.23
MSH6-209ENST00000538136 SCYL1Q96KG9 808 aa7.39□□□□□ -1.23
MSH6-209ENST00000538136 OSBPL9Q96SU4 736 aa7.39□□□□□ -1.23
MSH6-209ENST00000538136 IQCGQ9H095 443 aaKnown RBP7.39□□□□□ -1.23
MSH6-209ENST00000538136 DPEP2Q9H4A9 486 aa7.39□□□□□ -1.23
MSH6-209ENST00000538136 ELOVL2Q9NXB9 296 aa7.39□□□□□ -1.23
MSH6-209ENST00000538136 ZNHIT2Q9UHR6 403 aa7.39□□□□□ -1.23
MSH6-209ENST00000538136 ITM2BQ9Y287 266 aa7.39□□□□□ -1.23
MSH6-209ENST00000538136 WDFY4Q6ZS81 3184 aa7.39□□□□□ -1.23
MSH6-209ENST00000538136 OTOFQ9HC10 1997 aa7.38□□□□□ -1.23
MSH6-209ENST00000538136 C1orf232A0A0U1RR37 186 aa7.38□□□□□ -1.23
MSH6-209ENST00000538136 CPED1A4D0V7 1026 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms