RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 BNC1Q01954 994 aa5.51□□□□□ -1.53
CCDC7-208ENST00000537047 SF3A3Q12874 501 aaKnown RBP eCLIP5.51□□□□□ -1.53
CCDC7-208ENST00000537047 OTUD3Q5T2D3 398 aaPredicted RBP5.51□□□□□ -1.53
CCDC7-208ENST00000537047 C8orf82Q6P1X6 216 aaPredicted RBP5.51□□□□□ -1.53
CCDC7-208ENST00000537047 FAM185AQ8N0U4 392 aa5.51□□□□□ -1.53
CCDC7-208ENST00000537047 CEP76Q8TAP6 659 aa5.51□□□□□ -1.53
CCDC7-208ENST00000537047 WDR60Q8WVS4 1066 aa5.51□□□□□ -1.53
CCDC7-208ENST00000537047 RTP4Q96DX8 246 aa5.51□□□□□ -1.53
CCDC7-208ENST00000537047 FIZ1Q96SL8 496 aa5.51□□□□□ -1.53
CCDC7-208ENST00000537047 TMEM120AQ9BXJ8 343 aa5.51□□□□□ -1.53
CCDC7-208ENST00000537047 IL25Q9H293 177 aa5.51□□□□□ -1.53
CCDC7-208ENST00000537047 DDX31Q9H8H2 851 aaKnown RBP5.51□□□□□ -1.53
CCDC7-208ENST00000537047 Q9N2J8 555 aa5.51□□□□□ -1.53
CCDC7-208ENST00000537047 CEP83Q9Y592 693 aa5.51□□□□□ -1.53
CCDC7-208ENST00000537047 RAI2Q9Y5P3 530 aa5.51□□□□□ -1.53
CCDC7-208ENST00000537047 DENND3A2RUS2 1198 aa5.5□□□□□ -1.53
CCDC7-208ENST00000537047 GNLYP22749 145 aa5.5□□□□□ -1.53
CCDC7-208ENST00000537047 BTBD16Q32M84 506 aa5.5□□□□□ -1.53
CCDC7-208ENST00000537047 ZNF672Q499Z4 452 aaPredicted RBP5.5□□□□□ -1.53
CCDC7-208ENST00000537047 ZNF569Q5MCW4 686 aa5.5□□□□□ -1.53
CCDC7-208ENST00000537047 ARL6IP4Q66PJ3 421 aaKnown RBP5.5□□□□□ -1.53
CCDC7-208ENST00000537047 RNF144BQ7Z419 303 aa5.5□□□□□ -1.53
CCDC7-208ENST00000537047 OR14A16Q8NHC5 309 aa5.5□□□□□ -1.53
CCDC7-208ENST00000537047 PARD3BQ8TEW8 1205 aa5.5□□□□□ -1.53
CCDC7-208ENST00000537047 KIAA1191Q96A73 305 aa5.5□□□□□ -1.53
CCDC7-208ENST00000537047 ZDHHC7Q9NXF8 308 aa5.5□□□□□ -1.53
CCDC7-208ENST00000537047 SLC39A10Q9ULF5 831 aa5.5□□□□□ -1.53
CCDC7-208ENST00000537047 SOCS5O75159 536 aa5.49□□□□□ -1.53
CCDC7-208ENST00000537047 UNGP13051 313 aaPredicted RBP5.49□□□□□ -1.53
CCDC7-208ENST00000537047 CYP2J2P51589 502 aa5.49□□□□□ -1.53
CCDC7-208ENST00000537047 HILS1P60008 231 aa5.49□□□□□ -1.53
CCDC7-208ENST00000537047 LONRF1Q17RB8 773 aa5.49□□□□□ -1.53
CCDC7-208ENST00000537047 PLK5Q496M5 336 aa5.49□□□□□ -1.53
CCDC7-208ENST00000537047 FOXP4Q8IVH2 680 aaPredicted RBP5.49□□□□□ -1.53
CCDC7-208ENST00000537047 MUC20Q8N307 709 aaPredicted RBP5.49□□□□□ -1.53
CCDC7-208ENST00000537047 MIGA1Q8NAN2 632 aa5.49□□□□□ -1.53
CCDC7-208ENST00000537047 INPP4AQ96PE3 977 aaPredicted RBP5.49□□□□□ -1.53
CCDC7-208ENST00000537047 SEPSECSQ9HD40 501 aaKnown RBP5.49□□□□□ -1.53
CCDC7-208ENST00000537047 TM7SF3Q9NS93 570 aa5.49□□□□□ -1.53
CCDC7-208ENST00000537047 FNIP2Q9P278 1114 aa5.49□□□□□ -1.53
CCDC7-208ENST00000537047 PCDHA10Q9Y5I2 948 aa5.49□□□□□ -1.53
CCDC7-208ENST00000537047 A0A0A0MQY5 61 aa5.48□□□□□ -1.53
CCDC7-208ENST00000537047 LINC01553A4QN01 128 aa5.48□□□□□ -1.53
CCDC7-208ENST00000537047 SAC3D1A6NKF1 404 aa5.48□□□□□ -1.53
CCDC7-208ENST00000537047 RASA4BC9J798 803 aa5.48□□□□□ -1.53
CCDC7-208ENST00000537047 RASA4O43374 803 aa5.48□□□□□ -1.53
CCDC7-208ENST00000537047 ASNA1O43681 348 aa5.48□□□□□ -1.53
CCDC7-208ENST00000537047 PLA2G6O60733 806 aa5.48□□□□□ -1.53
CCDC7-208ENST00000537047 UMODP07911 640 aa5.48□□□□□ -1.53
CCDC7-208ENST00000537047 PRPH2P23942 346 aa5.48□□□□□ -1.53
CCDC7-208ENST00000537047 NUDT6P53370 316 aa5.48□□□□□ -1.53
CCDC7-208ENST00000537047 POU5F1BQ06416 359 aa5.48□□□□□ -1.53
CCDC7-208ENST00000537047 HEPHL1Q6MZM0 1159 aa5.48□□□□□ -1.53
CCDC7-208ENST00000537047 DPP9Q86TI2 863 aa5.48□□□□□ -1.53
CCDC7-208ENST00000537047 OR2C3Q8N628 320 aa5.48□□□□□ -1.53
CCDC7-208ENST00000537047 OR1N1Q8NGS0 311 aa5.48□□□□□ -1.53
CCDC7-208ENST00000537047 BICD2Q8TD16 824 aa5.48□□□□□ -1.53
CCDC7-208ENST00000537047 PKP4Q99569 1192 aa5.48□□□□□ -1.53
CCDC7-208ENST00000537047 PRPF18Q99633 342 aaKnown RBP5.48□□□□□ -1.53
CCDC7-208ENST00000537047 TMEM248Q9NWD8 314 aa5.48□□□□□ -1.53
CCDC7-208ENST00000537047 CDH22Q9UJ99 828 aa5.48□□□□□ -1.53
CCDC7-208ENST00000537047 CNTN6Q9UQ52 1028 aa5.48□□□□□ -1.53
CCDC7-208ENST00000537047 LOC102724159A0A0B4J2E5 919 aa5.47□□□□□ -1.53
CCDC7-208ENST00000537047 AQP12BA6NM10 295 aa5.47□□□□□ -1.53
CCDC7-208ENST00000537047 HNRNPDLO14979 420 aaKnown RBP5.47□□□□□ -1.53
CCDC7-208ENST00000537047 SLC16A5O15375 505 aa5.47□□□□□ -1.53
CCDC7-208ENST00000537047 HEXIM1O94992 359 aaKnown RBP5.47□□□□□ -1.53
CCDC7-208ENST00000537047 TYK2P29597 1187 aa5.47□□□□□ -1.53
CCDC7-208ENST00000537047 AMTP48728 403 aa5.47□□□□□ -1.53
CCDC7-208ENST00000537047 RCAN1P53805 252 aa5.47□□□□□ -1.53
CCDC7-208ENST00000537047 SLC39A14Q15043 492 aa5.47□□□□□ -1.53
CCDC7-208ENST00000537047 PWP2Q15269 919 aaKnown RBP5.47□□□□□ -1.53
CCDC7-208ENST00000537047 FAM171A1Q5VUB5 890 aa5.47□□□□□ -1.53
CCDC7-208ENST00000537047 IZUMO3Q5VZ72 239 aa5.47□□□□□ -1.53
CCDC7-208ENST00000537047 FBXL22Q6P050 247 aa5.47□□□□□ -1.53
CCDC7-208ENST00000537047 MTFR2Q6P444 385 aa5.47□□□□□ -1.53
CCDC7-208ENST00000537047 MEX3BQ6ZN04 569 aaKnown RBP5.47□□□□□ -1.53
CCDC7-208ENST00000537047 HMGB4Q8WW32 186 aa5.47□□□□□ -1.53
CCDC7-208ENST00000537047 CERS4Q9HA82 394 aa5.47□□□□□ -1.53
CCDC7-208ENST00000537047 SDF2L1Q9HCN8 221 aa5.47□□□□□ -1.53
CCDC7-208ENST00000537047 A0A0B4J293 547 aa5.46□□□□□ -1.54
CCDC7-208ENST00000537047 FAM90A18PA6NE21 464 aa5.46□□□□□ -1.54
CCDC7-208ENST00000537047 FAM90A16PA6NEW6 464 aa5.46□□□□□ -1.54
CCDC7-208ENST00000537047 FAM90A9PA6NNJ1 464 aa5.46□□□□□ -1.54
CCDC7-208ENST00000537047 FAM90A5PA8MXJ8 464 aa5.46□□□□□ -1.54
CCDC7-208ENST00000537047 KCNJ13O60928 360 aa5.46□□□□□ -1.54
CCDC7-208ENST00000537047 SOX30O94993 753 aa5.46□□□□□ -1.54
CCDC7-208ENST00000537047 SNRNP70P08621 437 aaKnown RBP5.46□□□□□ -1.54
CCDC7-208ENST00000537047 FAM90A15PP0C7V4 464 aa5.46□□□□□ -1.54
CCDC7-208ENST00000537047 FAM90A14PP0C7W9 464 aa5.46□□□□□ -1.54
CCDC7-208ENST00000537047 TM4SF4P48230 202 aa5.46□□□□□ -1.54
CCDC7-208ENST00000537047 KIF19Q2TAC6 998 aa5.46□□□□□ -1.54
CCDC7-208ENST00000537047 SYTL3Q4VX76 610 aa5.46□□□□□ -1.54
CCDC7-208ENST00000537047 ATG9BQ674R7 924 aa5.46□□□□□ -1.54
CCDC7-208ENST00000537047 RETSATQ6NUM9 610 aa5.46□□□□□ -1.54
CCDC7-208ENST00000537047 NRSN1Q8IZ57 195 aa5.46□□□□□ -1.54
CCDC7-208ENST00000537047 VPS52Q8N1B4 723 aa5.46□□□□□ -1.54
CCDC7-208ENST00000537047 FAM216AQ8WUB2 273 aa5.46□□□□□ -1.54
CCDC7-208ENST00000537047 TMEM255BQ8WV15 326 aa5.46□□□□□ -1.54
CCDC7-208ENST00000537047 MUL1Q969V5 352 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms