RNA–Protein interactions for RNA: ENST00000536265.5

DDX11-208, Transcript of DEAD/H-box helicase 11, human

TSL 5

Gene DDX11, Length 3,603 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX11-208	ENST00000536265	TMEM169	Q96HH4	297 aa		11.74	□□□□□ -0.53
DDX11-208	ENST00000536265	SDAD1	Q9NVU7	687 aa	Known RBP eCLIP	11.74	□□□□□ -0.53
DDX11-208	ENST00000536265	DCDC2	Q9UHG0	476 aa		11.74	□□□□□ -0.53
DDX11-208	ENST00000536265	TLR6	Q9Y2C9	796 aa		11.74	□□□□□ -0.53
DDX11-208	ENST00000536265	ATP11B	Q9Y2G3	1177 aa		11.74	□□□□□ -0.53
DDX11-208	ENST00000536265	RAMP2	O60895	175 aa		11.74	□□□□□ -0.53
DDX11-208	ENST00000536265	RPL17	P18621	184 aa	Known RBP	11.74	□□□□□ -0.53
DDX11-208	ENST00000536265	OR1E1	P30953	314 aa		11.74	□□□□□ -0.53
DDX11-208	ENST00000536265	HTR7	P34969	479 aa		11.74	□□□□□ -0.53
DDX11-208	ENST00000536265	OR1D2	P34982	312 aa		11.74	□□□□□ -0.53
DDX11-208	ENST00000536265	HARS2	P49590	506 aa	Known RBP	11.74	□□□□□ -0.53
DDX11-208	ENST00000536265	USP46	P62068	366 aa		11.74	□□□□□ -0.53
DDX11-208	ENST00000536265	USP10	Q14694	798 aa	Known RBP	11.74	□□□□□ -0.53
DDX11-208	ENST00000536265	BEND5	Q7L4P6	421 aa		11.74	□□□□□ -0.53
DDX11-208	ENST00000536265	SCML4	Q8N228	414 aa		11.74	□□□□□ -0.53
DDX11-208	ENST00000536265	LRRC43	Q8N309	656 aa		11.74	□□□□□ -0.53
DDX11-208	ENST00000536265	FITM2	Q8N6M3	262 aa		11.74	□□□□□ -0.53
DDX11-208	ENST00000536265	PHF24	Q9UPV7	400 aa		11.74	□□□□□ -0.53
DDX11-208	ENST00000536265	CFAP73	A6NFT4	308 aa		11.73	□□□□□ -0.53
DDX11-208	ENST00000536265		F5H5T6	163 aa		11.73	□□□□□ -0.53
DDX11-208	ENST00000536265	TMEM189-UBE2V1	I3L0A0	370 aa		11.73	□□□□□ -0.53
DDX11-208	ENST00000536265	MATN3	O15232	486 aa		11.73	□□□□□ -0.53
DDX11-208	ENST00000536265	CSPG5	O95196	566 aa		11.73	□□□□□ -0.53
DDX11-208	ENST00000536265	PGF	P49763	221 aa		11.73	□□□□□ -0.53
DDX11-208	ENST00000536265	MXRA7	P84157	204 aa		11.73	□□□□□ -0.53
DDX11-208	ENST00000536265	LACTB2	Q53H82	288 aa	Predicted RBP	11.73	□□□□□ -0.53
DDX11-208	ENST00000536265	IL31	Q6EBC2	164 aa		11.73	□□□□□ -0.53
DDX11-208	ENST00000536265	ZCCHC23	Q6ZST2	131 aa		11.73	□□□□□ -0.53
DDX11-208	ENST00000536265	MARK2	Q7KZI7	788 aa	Known RBP	11.73	□□□□□ -0.53
DDX11-208	ENST00000536265	WDR75	Q8IWA0	830 aa	Known RBP	11.73	□□□□□ -0.53
DDX11-208	ENST00000536265	OR6P1	Q8NGX9	317 aa		11.73	□□□□□ -0.53
DDX11-208	ENST00000536265	IFT43	Q96FT9	208 aa		11.73	□□□□□ -0.53
DDX11-208	ENST00000536265	BTN2A3P	Q96KV6	586 aa		11.73	□□□□□ -0.53
DDX11-208	ENST00000536265	KLC4	Q9NSK0	619 aa		11.73	□□□□□ -0.53
DDX11-208	ENST00000536265	ARHGEF38	Q9NXL2	777 aa		11.73	□□□□□ -0.53
DDX11-208	ENST00000536265	MOCS1	Q9NZB8	636 aa		11.73	□□□□□ -0.53
DDX11-208	ENST00000536265	NUP205	Q92621	2012 aa		11.73	□□□□□ -0.53
DDX11-208	ENST00000536265	TIMM44	O43615	452 aa		11.73	□□□□□ -0.53
DDX11-208	ENST00000536265	HAUS5	O94927	633 aa		11.73	□□□□□ -0.53
DDX11-208	ENST00000536265	VAPB	O95292	243 aa		11.73	□□□□□ -0.53
DDX11-208	ENST00000536265	MAGEA3	P43357	314 aa		11.73	□□□□□ -0.53
DDX11-208	ENST00000536265	SERPINB8	P50452	374 aa		11.73	□□□□□ -0.53
DDX11-208	ENST00000536265	MAX	P61244	160 aa		11.73	□□□□□ -0.53
DDX11-208	ENST00000536265	VEPH1	Q14D04	833 aa		11.73	□□□□□ -0.53
DDX11-208	ENST00000536265	POLD3	Q15054	466 aa	Predicted RBP	11.73	□□□□□ -0.53
DDX11-208	ENST00000536265	BHLHA9	Q7RTU4	235 aa		11.73	□□□□□ -0.53
DDX11-208	ENST00000536265	BNIPL	Q7Z465	357 aa		11.73	□□□□□ -0.53
DDX11-208	ENST00000536265	MTDH	Q86UE4	582 aa	Known RBP	11.73	□□□□□ -0.53
DDX11-208	ENST00000536265	KLHL5	Q96PQ7	755 aa		11.73	□□□□□ -0.53
DDX11-208	ENST00000536265	ELAC1	Q9H777	363 aa	Known RBP	11.73	□□□□□ -0.53
DDX11-208	ENST00000536265	CYP4F11	Q9HBI6	524 aa		11.73	□□□□□ -0.53
DDX11-208	ENST00000536265	PPARGC1A	Q9UBK2	798 aa	Known RBP	11.73	□□□□□ -0.53
DDX11-208	ENST00000536265	HEY2	Q9UBP5	337 aa		11.73	□□□□□ -0.53
DDX11-208	ENST00000536265	MTMR11	A4FU01	709 aa		11.73	□□□□□ -0.53
DDX11-208	ENST00000536265	PRRG1	O14668	218 aa		11.73	□□□□□ -0.53
DDX11-208	ENST00000536265	TNFRSF10B	O14763	440 aa		11.73	□□□□□ -0.53
DDX11-208	ENST00000536265	GALT	P07902	379 aa		11.73	□□□□□ -0.53
DDX11-208	ENST00000536265	IRF1	P10914	325 aa		11.73	□□□□□ -0.53
DDX11-208	ENST00000536265	TARS	P26639	723 aa	Known RBP	11.73	□□□□□ -0.53
DDX11-208	ENST00000536265	MAGEA11	P43364	429 aa		11.73	□□□□□ -0.53
DDX11-208	ENST00000536265	ALDH1A3	P47895	512 aa		11.73	□□□□□ -0.53
DDX11-208	ENST00000536265	GPR17	Q13304	367 aa		11.73	□□□□□ -0.53
DDX11-208	ENST00000536265	IKBKE	Q14164	716 aa		11.73	□□□□□ -0.53
DDX11-208	ENST00000536265	USP41	Q3LFD5	358 aa		11.73	□□□□□ -0.53
DDX11-208	ENST00000536265	RNF19B	Q6ZMZ0	732 aa		11.73	□□□□□ -0.53
DDX11-208	ENST00000536265	CMC1	Q7Z7K0	106 aa		11.73	□□□□□ -0.53
DDX11-208	ENST00000536265	RAB3IP	Q96QF0	476 aa	Predicted RBP	11.73	□□□□□ -0.53
DDX11-208	ENST00000536265	MYLK2	Q9H1R3	596 aa		11.73	□□□□□ -0.53
DDX11-208	ENST00000536265	PRDM5	Q9NQX1	630 aa	Predicted RBP	11.73	□□□□□ -0.53
DDX11-208	ENST00000536265	PSAT1	Q9Y617	370 aa		11.73	□□□□□ -0.53
DDX11-208	ENST00000536265	RFPL1	O75677	317 aa		11.72	□□□□□ -0.53
DDX11-208	ENST00000536265	ATP5H	O75947	161 aa		11.72	□□□□□ -0.53
DDX11-208	ENST00000536265	KCNA4	P22459	653 aa		11.72	□□□□□ -0.53
DDX11-208	ENST00000536265	CD68	P34810	354 aa	Predicted RBP	11.72	□□□□□ -0.53
DDX11-208	ENST00000536265	SLC11A2	P49281	568 aa		11.72	□□□□□ -0.53
DDX11-208	ENST00000536265	TUFM	P49411	452 aa	Known RBP	11.72	□□□□□ -0.53
DDX11-208	ENST00000536265	BST1	Q10588	318 aa		11.72	□□□□□ -0.53
DDX11-208	ENST00000536265	SNCB	Q16143	134 aa		11.72	□□□□□ -0.53
DDX11-208	ENST00000536265	UGP2	Q16851	508 aa		11.72	□□□□□ -0.53
DDX11-208	ENST00000536265	SPRED3	Q2MJR0	410 aa		11.72	□□□□□ -0.53
DDX11-208	ENST00000536265	FASTKD1	Q53R41	847 aa	Known RBP	11.72	□□□□□ -0.53
DDX11-208	ENST00000536265	PLEKHG4	Q58EX7	1191 aa		11.72	□□□□□ -0.53
DDX11-208	ENST00000536265	RTP2	Q5QGT7	225 aa		11.72	□□□□□ -0.53
DDX11-208	ENST00000536265	CDHR3	Q6ZTQ4	885 aa		11.72	□□□□□ -0.53
DDX11-208	ENST00000536265	LRRC49	Q8IUZ0	686 aa		11.72	□□□□□ -0.53
DDX11-208	ENST00000536265	LGI2	Q8N0V4	545 aa		11.72	□□□□□ -0.53
DDX11-208	ENST00000536265	GPATCH11	Q8N954	259 aa		11.72	□□□□□ -0.53
DDX11-208	ENST00000536265	PKMYT1	Q99640	499 aa		11.72	□□□□□ -0.53
DDX11-208	ENST00000536265	ENTPD7	Q9NQZ7	604 aa		11.72	□□□□□ -0.53
DDX11-208	ENST00000536265	TMEM51	Q9NW97	253 aa		11.72	□□□□□ -0.53
DDX11-208	ENST00000536265	MTO1	Q9Y2Z2	717 aa	Known RBP	11.72	□□□□□ -0.53
DDX11-208	ENST00000536265	USP1	O94782	785 aa		11.72	□□□□□ -0.53
DDX11-208	ENST00000536265	F7	P08709	466 aa	Predicted RBP	11.72	□□□□□ -0.53
DDX11-208	ENST00000536265	MYL2	P10916	166 aa		11.72	□□□□□ -0.53
DDX11-208	ENST00000536265	EZR	P15311	586 aa	Known RBP	11.72	□□□□□ -0.53
DDX11-208	ENST00000536265	DNAJB2	P25686	324 aa		11.72	□□□□□ -0.53
DDX11-208	ENST00000536265	CRHR1	P34998	444 aa		11.72	□□□□□ -0.53
DDX11-208	ENST00000536265	ATP5C1	P36542	298 aa	Known RBP	11.72	□□□□□ -0.53
DDX11-208	ENST00000536265	NEK3	P51956	506 aa		11.72	□□□□□ -0.53
DDX11-208	ENST00000536265	PCID2	Q5JVF3	399 aa		11.72	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms