RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 MCF2LO15068 1137 aa13.47□□□□□ -0.25
RTN3-207ENST00000536011 LATO43561 262 aa13.47□□□□□ -0.25
RTN3-207ENST00000536011 DLG2Q15700 870 aa13.47□□□□□ -0.25
RTN3-207ENST00000536011 HSP90AA4PQ58FG1 418 aa13.47□□□□□ -0.25
RTN3-207ENST00000536011 TCP11X2Q5H9J9 407 aa13.47□□□□□ -0.25
RTN3-207ENST00000536011 C6orf118Q5T5N4 469 aa13.47□□□□□ -0.25
RTN3-207ENST00000536011 NAPEPLDQ6IQ20 393 aa13.47□□□□□ -0.25
RTN3-207ENST00000536011 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.47□□□□□ -0.25
RTN3-207ENST00000536011 CCNI2Q6ZMN8 369 aaPredicted RBP13.47□□□□□ -0.25
RTN3-207ENST00000536011 ZNF677Q86XU0 584 aa13.47□□□□□ -0.25
RTN3-207ENST00000536011 SH2D3CQ8N5H7 860 aa13.47□□□□□ -0.25
RTN3-207ENST00000536011 DCAF4L2Q8NA75 395 aa13.47□□□□□ -0.25
RTN3-207ENST00000536011 NT5C3BQ969T7 300 aa13.47□□□□□ -0.25
RTN3-207ENST00000536011 ALG14Q96F25 216 aa13.47□□□□□ -0.25
RTN3-207ENST00000536011 C1orf74Q96LT6 269 aa13.47□□□□□ -0.25
RTN3-207ENST00000536011 STK33Q9BYT3 514 aa13.47□□□□□ -0.25
RTN3-207ENST00000536011 DYRK4Q9NR20 520 aa13.47□□□□□ -0.25
RTN3-207ENST00000536011 OR51B4Q9Y5P0 310 aa13.47□□□□□ -0.25
RTN3-207ENST00000536011 CABIN1Q9Y6J0 2220 aa13.47□□□□□ -0.25
RTN3-207ENST00000536011 DSPP15924 2871 aaKnown RBP13.46□□□□□ -0.25
RTN3-207ENST00000536011 PLRG1O43660 514 aaKnown RBP13.46□□□□□ -0.25
RTN3-207ENST00000536011 ADCY5O95622 1261 aa13.46□□□□□ -0.25
RTN3-207ENST00000536011 ITGAVP06756 1048 aa13.46□□□□□ -0.25
RTN3-207ENST00000536011 CDK4P11802 303 aa13.46□□□□□ -0.25
RTN3-207ENST00000536011 VAV1P15498 845 aa13.46□□□□□ -0.25
RTN3-207ENST00000536011 DRD3P35462 400 aa13.46□□□□□ -0.25
RTN3-207ENST00000536011 GGCXP38435 758 aa13.46□□□□□ -0.25
RTN3-207ENST00000536011 OVGP1Q12889 678 aa13.46□□□□□ -0.25
RTN3-207ENST00000536011 SETMARQ53H47 684 aaPredicted RBP13.46□□□□□ -0.25
RTN3-207ENST00000536011 OTUD1Q5VV17 481 aaPredicted RBP13.46□□□□□ -0.25
RTN3-207ENST00000536011 TAF3Q5VWG9 929 aa13.46□□□□□ -0.25
RTN3-207ENST00000536011 ZNF783Q6ZMS7 281 aa13.46□□□□□ -0.25
RTN3-207ENST00000536011 Q6ZVU0 165 aa13.46□□□□□ -0.25
RTN3-207ENST00000536011 ARCQ7LC44 396 aa13.46□□□□□ -0.25
RTN3-207ENST00000536011 SLCO6A1Q86UG4 719 aa13.46□□□□□ -0.25
RTN3-207ENST00000536011 IQCHQ86VS3 1027 aa13.46□□□□□ -0.25
RTN3-207ENST00000536011 TRIM69Q86WT6 500 aa13.46□□□□□ -0.25
RTN3-207ENST00000536011 XYLT1Q86Y38 959 aa13.46□□□□□ -0.25
RTN3-207ENST00000536011 ATP11CQ8NB49 1132 aa13.46□□□□□ -0.25
RTN3-207ENST00000536011 PIP4K2CQ8TBX8 421 aa13.46□□□□□ -0.25
RTN3-207ENST00000536011 FAM131CQ96AQ9 280 aa13.46□□□□□ -0.25
RTN3-207ENST00000536011 TBCBQ99426 244 aa13.46□□□□□ -0.25
RTN3-207ENST00000536011 NAA15Q9BXJ9 866 aaKnown RBP13.46□□□□□ -0.25
RTN3-207ENST00000536011 ERVMER34-1Q9H9K5 563 aa13.46□□□□□ -0.25
RTN3-207ENST00000536011 PREBQ9HCU5 417 aa13.46□□□□□ -0.25
RTN3-207ENST00000536011 PPM1HQ9ULR3 514 aa13.46□□□□□ -0.25
RTN3-207ENST00000536011 BTBD3Q9Y2F9 522 aa13.46□□□□□ -0.25
RTN3-207ENST00000536011 PLXNA2O75051 1894 aa13.46□□□□□ -0.26
RTN3-207ENST00000536011 LAMA5O15230 3695 aa13.45□□□□□ -0.26
RTN3-207ENST00000536011 TMEM131Q92545 1883 aa13.45□□□□□ -0.26
RTN3-207ENST00000536011 GOLGA8CPA6NN73 597 aa13.45□□□□□ -0.26
RTN3-207ENST00000536011 C10orf142B7Z368 130 aa13.45□□□□□ -0.26
RTN3-207ENST00000536011 GOLGA8SH3BPF8 625 aa13.45□□□□□ -0.26
RTN3-207ENST00000536011 TLR4O00206 839 aa13.45□□□□□ -0.26
RTN3-207ENST00000536011 KCNK3O14649 394 aa13.45□□□□□ -0.26
RTN3-207ENST00000536011 BNIP3LO60238 219 aa13.45□□□□□ -0.26
RTN3-207ENST00000536011 DKK1O94907 266 aa13.45□□□□□ -0.26
RTN3-207ENST00000536011 PRNPP04156 253 aa13.45□□□□□ -0.26
RTN3-207ENST00000536011 ATXN1LP0C7T5 689 aaKnown RBP13.45□□□□□ -0.26
RTN3-207ENST00000536011 OR1E1P30953 314 aa13.45□□□□□ -0.26
RTN3-207ENST00000536011 ANP32AP39687 249 aaKnown RBP13.45□□□□□ -0.26
RTN3-207ENST00000536011 RECQLP46063 649 aaPredicted RBP13.45□□□□□ -0.26
RTN3-207ENST00000536011 NUMBP49757 651 aa13.45□□□□□ -0.26
RTN3-207ENST00000536011 IRAK1P51617 712 aa13.45□□□□□ -0.26
RTN3-207ENST00000536011 IL9RQ01113 521 aa13.45□□□□□ -0.26
RTN3-207ENST00000536011 SCAPQ12770 1279 aa13.45□□□□□ -0.26
RTN3-207ENST00000536011 CNTN1Q12860 1018 aa13.45□□□□□ -0.26
RTN3-207ENST00000536011 STAT4Q14765 748 aa13.45□□□□□ -0.26
RTN3-207ENST00000536011 FKBP15Q5T1M5 1219 aa13.45□□□□□ -0.26
RTN3-207ENST00000536011 RETSATQ6NUM9 610 aa13.45□□□□□ -0.26
RTN3-207ENST00000536011 TMPRSS7Q7RTY8 843 aa13.45□□□□□ -0.26
RTN3-207ENST00000536011 C14orf80Q86SX3 495 aa13.45□□□□□ -0.26
RTN3-207ENST00000536011 NOP9Q86U38 636 aaKnown RBP13.45□□□□□ -0.26
RTN3-207ENST00000536011 PROSER1Q86XN7 944 aa13.45□□□□□ -0.26
RTN3-207ENST00000536011 MFSD2AQ8NA29 543 aa13.45□□□□□ -0.26
RTN3-207ENST00000536011 ANKRD20A12PQ8NF67 263 aa13.45□□□□□ -0.26
RTN3-207ENST00000536011 EPS8L1Q8TE68 723 aa13.45□□□□□ -0.26
RTN3-207ENST00000536011 PPP1R16AQ96I34 528 aa13.45□□□□□ -0.26
RTN3-207ENST00000536011 HAPLN3Q96S86 360 aa13.45□□□□□ -0.26
RTN3-207ENST00000536011 CCDC86Q9H6F5 360 aaKnown RBP13.45□□□□□ -0.26
RTN3-207ENST00000536011 SAMSN1Q9NSI8 373 aaKnown RBP13.45□□□□□ -0.26
RTN3-207ENST00000536011 TOR4AQ9NXH8 423 aa13.45□□□□□ -0.26
RTN3-207ENST00000536011 VPS51Q9UID3 782 aa13.45□□□□□ -0.26
RTN3-207ENST00000536011 COL5A1P20908 1838 aaPredicted RBP13.44□□□□□ -0.26
RTN3-207ENST00000536011 IGLV3-10A0A075B6K4 115 aa13.44□□□□□ -0.26
RTN3-207ENST00000536011 A0A1W2PR77 199 aa13.44□□□□□ -0.26
RTN3-207ENST00000536011 ILVBLA1L0T0 632 aa13.44□□□□□ -0.26
RTN3-207ENST00000536011 DRGXA6NNA5 263 aa13.44□□□□□ -0.26
RTN3-207ENST00000536011 E9PAM4 449 aa13.44□□□□□ -0.26
RTN3-207ENST00000536011 PRAMEF26H0Y7S4 382 aa13.44□□□□□ -0.26
RTN3-207ENST00000536011 KPNA3O00505 521 aaPredicted RBP13.44□□□□□ -0.26
RTN3-207ENST00000536011 RNGTTO60942 597 aaKnown RBP13.44□□□□□ -0.26
RTN3-207ENST00000536011 RTN2O75298 545 aa13.44□□□□□ -0.26
RTN3-207ENST00000536011 CNTN5O94779 1100 aa13.44□□□□□ -0.26
RTN3-207ENST00000536011 SRCP12931 536 aa13.44□□□□□ -0.26
RTN3-207ENST00000536011 ETFBP38117 255 aa13.44□□□□□ -0.26
RTN3-207ENST00000536011 NXPH1P58417 271 aa13.44□□□□□ -0.26
RTN3-207ENST00000536011 PPP2CBP62714 309 aa13.44□□□□□ -0.26
RTN3-207ENST00000536011 PPP2CAP67775 309 aa13.44□□□□□ -0.26
RTN3-207ENST00000536011 NOMO3P69849 1222 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms