RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 CALN1Q9BXU9 219 aa13.33□□□□□ -0.28
TNFRSF1A-207ENST00000535958 SLC4A5Q9BY07 1137 aa13.33□□□□□ -0.28
TNFRSF1A-207ENST00000535958 INTS2Q9H0H0 1204 aaKnown RBP13.33□□□□□ -0.28
TNFRSF1A-207ENST00000535958 SYNCQ9H7C4 482 aa13.33□□□□□ -0.28
TNFRSF1A-207ENST00000535958 VANGL2Q9ULK5 521 aa13.33□□□□□ -0.28
TNFRSF1A-207ENST00000535958 CTNND2Q9UQB3 1225 aa13.33□□□□□ -0.28
TNFRSF1A-207ENST00000535958 MCF2LO15068 1137 aa13.32□□□□□ -0.28
TNFRSF1A-207ENST00000535958 SLC31A1O15431 190 aa13.32□□□□□ -0.28
TNFRSF1A-207ENST00000535958 FFAR2O15552 330 aa13.32□□□□□ -0.28
TNFRSF1A-207ENST00000535958 SIGLEC6O43699 453 aa13.32□□□□□ -0.28
TNFRSF1A-207ENST00000535958 ATP9BO43861 1147 aa13.32□□□□□ -0.28
TNFRSF1A-207ENST00000535958 HSF2BPO75031 334 aa13.32□□□□□ -0.28
TNFRSF1A-207ENST00000535958 CLDN11O75508 207 aa13.32□□□□□ -0.28
TNFRSF1A-207ENST00000535958 MT-CO3P00414 261 aa13.32□□□□□ -0.28
TNFRSF1A-207ENST00000535958 IGLV3-25P01717 112 aa13.32□□□□□ -0.28
TNFRSF1A-207ENST00000535958 GLI1P08151 1106 aa13.32□□□□□ -0.28
TNFRSF1A-207ENST00000535958 RECQLP46063 649 aaPredicted RBP13.32□□□□□ -0.28
TNFRSF1A-207ENST00000535958 PLK1P53350 603 aa13.32□□□□□ -0.28
TNFRSF1A-207ENST00000535958 METAP1P53582 386 aa13.32□□□□□ -0.28
TNFRSF1A-207ENST00000535958 PCBP4P57723 403 aaKnown RBP13.32□□□□□ -0.28
TNFRSF1A-207ENST00000535958 INSM1Q01101 510 aaPredicted RBP13.32□□□□□ -0.28
TNFRSF1A-207ENST00000535958 NME3Q13232 169 aa13.32□□□□□ -0.28
TNFRSF1A-207ENST00000535958 ZNF211Q13398 564 aaPredicted RBP13.32□□□□□ -0.28
TNFRSF1A-207ENST00000535958 PROX2Q3B8N5 592 aa13.32□□□□□ -0.28
TNFRSF1A-207ENST00000535958 TAF1BQ53T94 588 aaPredicted RBP13.32□□□□□ -0.28
TNFRSF1A-207ENST00000535958 EFHC1Q5JVL4 640 aa13.32□□□□□ -0.28
TNFRSF1A-207ENST00000535958 CXorf57Q6NSI4 855 aaKnown RBP13.32□□□□□ -0.28
TNFRSF1A-207ENST00000535958 FBXL22Q6P050 247 aa13.32□□□□□ -0.28
TNFRSF1A-207ENST00000535958 TMC6Q7Z403 805 aa13.32□□□□□ -0.28
TNFRSF1A-207ENST00000535958 ZNF605Q86T29 641 aa13.32□□□□□ -0.28
TNFRSF1A-207ENST00000535958 CACTIN-AS1Q8N1I8 211 aa13.32□□□□□ -0.28
TNFRSF1A-207ENST00000535958 ATP11CQ8NB49 1132 aa13.32□□□□□ -0.28
TNFRSF1A-207ENST00000535958 ZNF248Q8NDW4 579 aa13.32□□□□□ -0.28
TNFRSF1A-207ENST00000535958 FRS2Q8WU20 508 aa13.32□□□□□ -0.28
TNFRSF1A-207ENST00000535958 NELFBQ8WX92 580 aa13.32□□□□□ -0.28
TNFRSF1A-207ENST00000535958 RFFLQ8WZ73 363 aa13.32□□□□□ -0.28
TNFRSF1A-207ENST00000535958 PPP1R16AQ96I34 528 aa13.32□□□□□ -0.28
TNFRSF1A-207ENST00000535958 DEPDC7Q96QD5 511 aa13.32□□□□□ -0.28
TNFRSF1A-207ENST00000535958 C2orf49Q9BVC5 232 aaPredicted RBP13.32□□□□□ -0.28
TNFRSF1A-207ENST00000535958 UBE2TQ9NPD8 197 aaPredicted RBP13.32□□□□□ -0.28
TNFRSF1A-207ENST00000535958 ARHGAP20Q9P2F6 1191 aa13.32□□□□□ -0.28
TNFRSF1A-207ENST00000535958 SARDHQ9UL12 918 aa13.32□□□□□ -0.28
TNFRSF1A-207ENST00000535958 PPM1HQ9ULR3 514 aa13.32□□□□□ -0.28
TNFRSF1A-207ENST00000535958 MYLKQ15746 1914 aa13.31□□□□□ -0.28
TNFRSF1A-207ENST00000535958 ASXL3Q9C0F0 2248 aa13.31□□□□□ -0.28
TNFRSF1A-207ENST00000535958 A0A1W2PQU0 124 aa13.31□□□□□ -0.28
TNFRSF1A-207ENST00000535958 NEMP2A6NFY4 417 aa13.31□□□□□ -0.28
TNFRSF1A-207ENST00000535958 CAPN8A6NHC0 703 aa13.31□□□□□ -0.28
TNFRSF1A-207ENST00000535958 PCDH8O95206 1070 aa13.31□□□□□ -0.28
TNFRSF1A-207ENST00000535958 FGFR1OPO95684 399 aaKnown RBP13.31□□□□□ -0.28
TNFRSF1A-207ENST00000535958 RHOCP08134 193 aa13.31□□□□□ -0.28
TNFRSF1A-207ENST00000535958 PRLRP16471 622 aa13.31□□□□□ -0.28
TNFRSF1A-207ENST00000535958 VASPP50552 380 aaPredicted RBP13.31□□□□□ -0.28
TNFRSF1A-207ENST00000535958 DUSP3P51452 185 aaPredicted RBP13.31□□□□□ -0.28
TNFRSF1A-207ENST00000535958 KCNMA1Q12791 1236 aa13.31□□□□□ -0.28
TNFRSF1A-207ENST00000535958 AUHQ13825 339 aaKnown RBP13.31□□□□□ -0.28
TNFRSF1A-207ENST00000535958 NEK5Q6P3R8 708 aa13.31□□□□□ -0.28
TNFRSF1A-207ENST00000535958 TMEM110Q86TL2 294 aa13.31□□□□□ -0.28
TNFRSF1A-207ENST00000535958 DEFB106AQ8N104 65 aa13.31□□□□□ -0.28
TNFRSF1A-207ENST00000535958 LSMEM2Q8N112 164 aa13.31□□□□□ -0.28
TNFRSF1A-207ENST00000535958 SH2D3CQ8N5H7 860 aa13.31□□□□□ -0.28
TNFRSF1A-207ENST00000535958 DCBLD1Q8N8Z6 715 aa13.31□□□□□ -0.28
TNFRSF1A-207ENST00000535958 OR4C6Q8NH72 309 aa13.31□□□□□ -0.28
TNFRSF1A-207ENST00000535958 LMO3Q8TAP4 145 aa13.31□□□□□ -0.28
TNFRSF1A-207ENST00000535958 SPATA20Q8TB22 786 aa13.31□□□□□ -0.28
TNFRSF1A-207ENST00000535958 ZNF606Q8WXB4 792 aa13.31□□□□□ -0.28
TNFRSF1A-207ENST00000535958 KLK6Q92876 244 aa13.31□□□□□ -0.28
TNFRSF1A-207ENST00000535958 FAM131CQ96AQ9 280 aa13.31□□□□□ -0.28
TNFRSF1A-207ENST00000535958 KREMEN1Q96MU8 473 aa13.31□□□□□ -0.28
TNFRSF1A-207ENST00000535958 TIGD1Q96MW7 591 aa13.31□□□□□ -0.28
TNFRSF1A-207ENST00000535958 PRMT1Q99873 361 aaKnown RBP13.31□□□□□ -0.28
TNFRSF1A-207ENST00000535958 FEM1AQ9BSK4 669 aa13.31□□□□□ -0.28
TNFRSF1A-207ENST00000535958 ABCG4Q9H172 646 aa13.31□□□□□ -0.28
TNFRSF1A-207ENST00000535958 ASNSD1Q9NWL6 643 aa13.31□□□□□ -0.28
TNFRSF1A-207ENST00000535958 CA5BQ9Y2D0 317 aa13.31□□□□□ -0.28
TNFRSF1A-207ENST00000535958 PAXBP1Q9Y5B6 917 aa13.31□□□□□ -0.28
TNFRSF1A-207ENST00000535958 RAI2Q9Y5P3 530 aa13.31□□□□□ -0.28
TNFRSF1A-207ENST00000535958 C10orf142B7Z368 130 aa13.3□□□□□ -0.28
TNFRSF1A-207ENST00000535958 H3BM21 787 aa13.3□□□□□ -0.28
TNFRSF1A-207ENST00000535958 TRIM38O00635 465 aa13.3□□□□□ -0.28
TNFRSF1A-207ENST00000535958 GRAP2O75791 330 aa13.3□□□□□ -0.28
TNFRSF1A-207ENST00000535958 ZIC2O95409 532 aaPredicted RBP13.3□□□□□ -0.28
TNFRSF1A-207ENST00000535958 PRNPP04156 253 aa13.3□□□□□ -0.28
TNFRSF1A-207ENST00000535958 HNRNPA2B1P22626 353 aaKnown RBP13.3□□□□□ -0.28
TNFRSF1A-207ENST00000535958 DGKAP23743 735 aa13.3□□□□□ -0.28
TNFRSF1A-207ENST00000535958 UCNP55089 124 aa13.3□□□□□ -0.28
TNFRSF1A-207ENST00000535958 CDH4P55283 916 aa13.3□□□□□ -0.28
TNFRSF1A-207ENST00000535958 TMPRSS3P57727 454 aa13.3□□□□□ -0.28
TNFRSF1A-207ENST00000535958 PITX1P78337 314 aaPredicted RBP13.3□□□□□ -0.28
TNFRSF1A-207ENST00000535958 OR6B2Q6IFH4 312 aa13.3□□□□□ -0.28
TNFRSF1A-207ENST00000535958 TTI2Q6NXR4 508 aa13.3□□□□□ -0.28
TNFRSF1A-207ENST00000535958 KANSL1Q7Z3B3 1105 aa13.3□□□□□ -0.28
TNFRSF1A-207ENST00000535958 PTAR1Q7Z6K3 402 aaPredicted RBP13.3□□□□□ -0.28
TNFRSF1A-207ENST00000535958 HORMAD1Q86X24 394 aa13.3□□□□□ -0.28
TNFRSF1A-207ENST00000535958 CREBRFQ8IUR6 639 aa13.3□□□□□ -0.28
TNFRSF1A-207ENST00000535958 PASD1Q8IV76 773 aa13.3□□□□□ -0.28
TNFRSF1A-207ENST00000535958 TRIM59Q8IWR1 403 aa13.3□□□□□ -0.28
TNFRSF1A-207ENST00000535958 SPACA3Q8IXA5 215 aa13.3□□□□□ -0.28
TNFRSF1A-207ENST00000535958 NAF1Q96HR8 494 aaKnown RBP13.3□□□□□ -0.28
TNFRSF1A-207ENST00000535958 PPP1R13BQ96KQ4 1090 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms