RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 KCNK4Q9NYG8 393 aa13.64□□□□□ -0.23
VPS33B-202ENST00000535906 TXNDC16Q9P2K2 825 aa13.64□□□□□ -0.23
VPS33B-202ENST00000535906 MYO16Q9Y6X6 1858 aa13.64□□□□□ -0.23
VPS33B-202ENST00000535906 BIRC5O15392 142 aa13.64□□□□□ -0.23
VPS33B-202ENST00000535906 MOCS2O96007 188 aaPredicted RBP13.64□□□□□ -0.23
VPS33B-202ENST00000535906 CCNCP24863 283 aa13.64□□□□□ -0.23
VPS33B-202ENST00000535906 HOXC13P31276 330 aa13.64□□□□□ -0.23
VPS33B-202ENST00000535906 GRK4P32298 578 aa13.64□□□□□ -0.23
VPS33B-202ENST00000535906 N4BP2L1Q5TBK1 243 aaPredicted RBP13.64□□□□□ -0.23
VPS33B-202ENST00000535906 KYAT3Q6YP21 454 aaKnown RBP13.64□□□□□ -0.23
VPS33B-202ENST00000535906 AZIN2Q96A70 460 aa13.64□□□□□ -0.23
VPS33B-202ENST00000535906 PRR11Q96HE9 360 aaPredicted RBP13.64□□□□□ -0.23
VPS33B-202ENST00000535906 TSGA13Q96PP4 275 aa13.64□□□□□ -0.23
VPS33B-202ENST00000535906 CPNE1Q99829 537 aa13.64□□□□□ -0.23
VPS33B-202ENST00000535906 SLC39A8Q9C0K1 460 aa13.64□□□□□ -0.23
VPS33B-202ENST00000535906 KCNU1A8MYU2 1149 aa13.63□□□□□ -0.23
VPS33B-202ENST00000535906 GSC2O15499 205 aa13.63□□□□□ -0.23
VPS33B-202ENST00000535906 MAFKO60675 156 aa13.63□□□□□ -0.23
VPS33B-202ENST00000535906 COG7P83436 770 aa13.63□□□□□ -0.23
VPS33B-202ENST00000535906 ZNF33AQ06730 810 aa13.63□□□□□ -0.23
VPS33B-202ENST00000535906 CDK18Q07002 472 aa13.63□□□□□ -0.23
VPS33B-202ENST00000535906 HSF5Q4G112 596 aaPredicted RBP13.63□□□□□ -0.23
VPS33B-202ENST00000535906 HSP90AA5PQ58FG0 334 aa13.63□□□□□ -0.23
VPS33B-202ENST00000535906 TEDDM1Q5T9Z0 273 aa13.63□□□□□ -0.23
VPS33B-202ENST00000535906 C14orf80Q86SX3 495 aa13.63□□□□□ -0.23
VPS33B-202ENST00000535906 ATXN7L3BQ96GX2 97 aa13.63□□□□□ -0.23
VPS33B-202ENST00000535906 ZNF778Q96MU6 729 aa13.63□□□□□ -0.23
VPS33B-202ENST00000535906 MPP6Q9NZW5 540 aa13.63□□□□□ -0.23
VPS33B-202ENST00000535906 HS3ST4Q9Y661 456 aa13.63□□□□□ -0.23
VPS33B-202ENST00000535906 MOXD2PA6NHM9 499 aa13.63□□□□□ -0.23
VPS33B-202ENST00000535906 TMEM189-UBE2V1I3L0A0 370 aa13.63□□□□□ -0.23
VPS33B-202ENST00000535906 FCHO1O14526 889 aa13.63□□□□□ -0.23
VPS33B-202ENST00000535906 GYG2O15488 501 aa13.63□□□□□ -0.23
VPS33B-202ENST00000535906 CACNG3O60359 315 aa13.63□□□□□ -0.23
VPS33B-202ENST00000535906 GLRA3O75311 464 aa13.63□□□□□ -0.23
VPS33B-202ENST00000535906 SNNO75324 88 aaPredicted RBP13.63□□□□□ -0.23
VPS33B-202ENST00000535906 ENTPD5O75356 428 aa13.63□□□□□ -0.23
VPS33B-202ENST00000535906 MT-CYBP00156 380 aaPredicted RBP13.63□□□□□ -0.23
VPS33B-202ENST00000535906 LMNAP02545 664 aaKnown RBP13.63□□□□□ -0.23
VPS33B-202ENST00000535906 PRKCGP05129 697 aa13.63□□□□□ -0.23
VPS33B-202ENST00000535906 TYK2P29597 1187 aa13.63□□□□□ -0.23
VPS33B-202ENST00000535906 NPY2RP49146 381 aa13.63□□□□□ -0.23
VPS33B-202ENST00000535906 USP46P62068 366 aa13.63□□□□□ -0.23
VPS33B-202ENST00000535906 PPP2R5DQ14738 602 aa13.63□□□□□ -0.23
VPS33B-202ENST00000535906 FASTKD1Q53R41 847 aaKnown RBP13.63□□□□□ -0.23
VPS33B-202ENST00000535906 STXBP5Q5T5C0 1151 aa13.63□□□□□ -0.23
VPS33B-202ENST00000535906 GRTP1Q5TC63 336 aa13.63□□□□□ -0.23
VPS33B-202ENST00000535906 STRA8Q7Z7C7 330 aa13.63□□□□□ -0.23
VPS33B-202ENST00000535906 CMC1Q7Z7K0 106 aa13.63□□□□□ -0.23
VPS33B-202ENST00000535906 ARID3BQ8IVW6 561 aaPredicted RBP13.63□□□□□ -0.23
VPS33B-202ENST00000535906 ATPAF2Q8N5M1 289 aa13.63□□□□□ -0.23
VPS33B-202ENST00000535906 TTC9BQ8N6N2 239 aa13.63□□□□□ -0.23
VPS33B-202ENST00000535906 URGCPQ8TCY9 931 aa13.63□□□□□ -0.23
VPS33B-202ENST00000535906 CD99L2Q8TCZ2 262 aa13.63□□□□□ -0.23
VPS33B-202ENST00000535906 RBBP8Q99708 897 aa13.63□□□□□ -0.23
VPS33B-202ENST00000535906 IL22Q9GZX6 179 aa13.63□□□□□ -0.23
VPS33B-202ENST00000535906 VWA8A3KMH1 1905 aa13.63□□□□□ -0.23
VPS33B-202ENST00000535906 A0A1W2PQ45 241 aaPredicted RBP13.62□□□□□ -0.23
VPS33B-202ENST00000535906 A0A1W2PQY0 241 aa13.62□□□□□ -0.23
VPS33B-202ENST00000535906 E2F8A0AVK6 867 aa13.62□□□□□ -0.23
VPS33B-202ENST00000535906 E9PAM4 449 aa13.62□□□□□ -0.23
VPS33B-202ENST00000535906 PLIN3O60664 434 aa13.62□□□□□ -0.23
VPS33B-202ENST00000535906 KITP10721 976 aa13.62□□□□□ -0.23
VPS33B-202ENST00000535906 ESRRAP11474 423 aaPredicted RBP13.62□□□□□ -0.23
VPS33B-202ENST00000535906 NMBRP28336 390 aa13.62□□□□□ -0.23
VPS33B-202ENST00000535906 TUBP50607 506 aa13.62□□□□□ -0.23
VPS33B-202ENST00000535906 CDH17Q12864 832 aa13.62□□□□□ -0.23
VPS33B-202ENST00000535906 NOGQ13253 232 aa13.62□□□□□ -0.23
VPS33B-202ENST00000535906 PRPSAP1Q14558 356 aa13.62□□□□□ -0.23
VPS33B-202ENST00000535906 FSTL4Q6MZW2 842 aa13.62□□□□□ -0.23
VPS33B-202ENST00000535906 TTC7BQ86TV6 843 aa13.62□□□□□ -0.23
VPS33B-202ENST00000535906 DCP1BQ8IZD4 617 aaKnown RBP13.62□□□□□ -0.23
VPS33B-202ENST00000535906 NUP93Q8N1F7 819 aa13.62□□□□□ -0.23
VPS33B-202ENST00000535906 DCLK2Q8N568 766 aa13.62□□□□□ -0.23
VPS33B-202ENST00000535906 TTC8Q8TAM2 541 aa13.62□□□□□ -0.23
VPS33B-202ENST00000535906 GPR152Q8TDT2 470 aa13.62□□□□□ -0.23
VPS33B-202ENST00000535906 NMUR2Q9GZQ4 415 aa13.62□□□□□ -0.23
VPS33B-202ENST00000535906 CATSPERBQ9H7T0 1116 aa13.62□□□□□ -0.23
VPS33B-202ENST00000535906 DCLRE1BQ9H816 532 aa13.62□□□□□ -0.23
VPS33B-202ENST00000535906 BATF3Q9NR55 127 aa13.62□□□□□ -0.23
VPS33B-202ENST00000535906 MARCOQ9UEW3 520 aaPredicted RBP13.62□□□□□ -0.23
VPS33B-202ENST00000535906 DCDC2Q9UHG0 476 aa13.62□□□□□ -0.23
VPS33B-202ENST00000535906 NYNRINQ9P2P1 1898 aaKnown RBP13.62□□□□□ -0.23
VPS33B-202ENST00000535906 MAGEB16A2A368 324 aa13.62□□□□□ -0.23
VPS33B-202ENST00000535906 CCDC78A2IDD5 438 aa13.62□□□□□ -0.23
VPS33B-202ENST00000535906 GOLGA8TH3BQL2 631 aa13.62□□□□□ -0.23
VPS33B-202ENST00000535906 FGF10O15520 208 aaPredicted RBP13.62□□□□□ -0.23
VPS33B-202ENST00000535906 TADA2AO75478 443 aa13.62□□□□□ -0.23
VPS33B-202ENST00000535906 ABCG1P45844 678 aa13.62□□□□□ -0.23
VPS33B-202ENST00000535906 RPL10AP62906 217 aaKnown RBP13.62□□□□□ -0.23
VPS33B-202ENST00000535906 FRG1Q14331 258 aaKnown RBP13.62□□□□□ -0.23
VPS33B-202ENST00000535906 VARS2Q5ST30 1063 aaKnown RBP13.62□□□□□ -0.23
VPS33B-202ENST00000535906 LHX8Q68G74 356 aa13.62□□□□□ -0.23
VPS33B-202ENST00000535906 NAPEPLDQ6IQ20 393 aa13.62□□□□□ -0.23
VPS33B-202ENST00000535906 RFWD3Q6PCD5 774 aa13.62□□□□□ -0.23
VPS33B-202ENST00000535906 ALYREFQ86V81 257 aaKnown RBP13.62□□□□□ -0.23
VPS33B-202ENST00000535906 MON1AQ86VX9 555 aa13.62□□□□□ -0.23
VPS33B-202ENST00000535906 KLHDC8BQ8IXV7 354 aa13.62□□□□□ -0.23
VPS33B-202ENST00000535906 KCNV2Q8TDN2 545 aa13.62□□□□□ -0.23
VPS33B-202ENST00000535906 ATP2A3Q93084 1043 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms