RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 RCE1Q9Y256 329 aa5.56□□□□□ -1.52
PRKDC-205ENST00000535375 RAP2CQ9Y3L5 183 aa5.56□□□□□ -1.52
PRKDC-205ENST00000535375 SAC3D1A6NKF1 404 aa5.55□□□□□ -1.52
PRKDC-205ENST00000535375 SPTLC2O15270 562 aa5.55□□□□□ -1.52
PRKDC-205ENST00000535375 TFRCP02786 760 aaKnown RBP5.55□□□□□ -1.52
PRKDC-205ENST00000535375 CYP1A2P05177 515 aa5.55□□□□□ -1.52
PRKDC-205ENST00000535375 CYP21A2P08686 494 aa5.55□□□□□ -1.52
PRKDC-205ENST00000535375 TYK2P29597 1187 aa5.55□□□□□ -1.52
PRKDC-205ENST00000535375 CCKARP32238 428 aa5.55□□□□□ -1.52
PRKDC-205ENST00000535375 MCM2P49736 904 aa5.55□□□□□ -1.52
PRKDC-205ENST00000535375 THBS3P49746 956 aa5.55□□□□□ -1.52
PRKDC-205ENST00000535375 SMAD1Q15797 465 aaKnown RBP5.55□□□□□ -1.52
PRKDC-205ENST00000535375 ODF3L2Q3SX64 289 aa5.55□□□□□ -1.52
PRKDC-205ENST00000535375 ASPHD1Q5U4P2 390 aa5.55□□□□□ -1.52
PRKDC-205ENST00000535375 TMEM268Q5VZI3 342 aa5.55□□□□□ -1.52
PRKDC-205ENST00000535375 JMJD6Q6NYC1 403 aaPredicted RBP5.55□□□□□ -1.52
PRKDC-205ENST00000535375 Q6ZTK2 550 aa5.55□□□□□ -1.52
PRKDC-205ENST00000535375 RNF144BQ7Z419 303 aa5.55□□□□□ -1.52
PRKDC-205ENST00000535375 SCN4BQ8IWT1 228 aa5.55□□□□□ -1.52
PRKDC-205ENST00000535375 CCT6BQ92526 530 aa5.55□□□□□ -1.52
PRKDC-205ENST00000535375 NTPCRQ9BSD7 190 aaKnown RBP5.55□□□□□ -1.52
PRKDC-205ENST00000535375 FAM167BQ9BTA0 163 aa5.55□□□□□ -1.52
PRKDC-205ENST00000535375 B3GNT4Q9C0J1 378 aa5.55□□□□□ -1.52
PRKDC-205ENST00000535375 HIPK2Q9H2X6 1198 aa5.55□□□□□ -1.52
PRKDC-205ENST00000535375 ACAD9Q9H845 621 aa5.55□□□□□ -1.52
PRKDC-205ENST00000535375 PLEKHA2Q9HB19 425 aa5.55□□□□□ -1.52
PRKDC-205ENST00000535375 KIF17Q9P2E2 1029 aa5.55□□□□□ -1.52
PRKDC-205ENST00000535375 TRBV5-7A0A0A0MS05 114 aa5.54□□□□□ -1.52
PRKDC-205ENST00000535375 FAM90A20PA6NIJ5 464 aa5.54□□□□□ -1.52
PRKDC-205ENST00000535375 TMCC1O94876 653 aa5.54□□□□□ -1.52
PRKDC-205ENST00000535375 FCGR2AP12318 317 aa5.54□□□□□ -1.52
PRKDC-205ENST00000535375 LYL1P12980 280 aa5.54□□□□□ -1.52
PRKDC-205ENST00000535375 CPA1P15085 419 aa5.54□□□□□ -1.52
PRKDC-205ENST00000535375 TNFSF8P32971 234 aa5.54□□□□□ -1.52
PRKDC-205ENST00000535375 SKIV2L2P42285 1042 aaKnown RBP5.54□□□□□ -1.52
PRKDC-205ENST00000535375 PRKAA2P54646 552 aa5.54□□□□□ -1.52
PRKDC-205ENST00000535375 GPR18Q14330 331 aa5.54□□□□□ -1.52
PRKDC-205ENST00000535375 RASGRP2Q7LDG7 609 aa5.54□□□□□ -1.52
PRKDC-205ENST00000535375 BHLHA9Q7RTU4 235 aa5.54□□□□□ -1.52
PRKDC-205ENST00000535375 CTU1Q7Z7A3 348 aaKnown RBP5.54□□□□□ -1.52
PRKDC-205ENST00000535375 GALNT7Q86SF2 657 aa5.54□□□□□ -1.52
PRKDC-205ENST00000535375 LRRC57Q8N9N7 239 aa5.54□□□□□ -1.52
PRKDC-205ENST00000535375 GABPB2Q8TAK5 448 aaPredicted RBP5.54□□□□□ -1.52
PRKDC-205ENST00000535375 C2CD4CQ8TF44 421 aa5.54□□□□□ -1.52
PRKDC-205ENST00000535375 ZNF333Q96JL9 665 aa5.54□□□□□ -1.52
PRKDC-205ENST00000535375 FRMD8Q9BZ67 464 aaPredicted RBP5.54□□□□□ -1.52
PRKDC-205ENST00000535375 ARHGAP39Q9C0H5 1083 aa5.54□□□□□ -1.52
PRKDC-205ENST00000535375 CHODLQ9H9P2 273 aa5.54□□□□□ -1.52
PRKDC-205ENST00000535375 G6PC2Q9NQR9 355 aa5.54□□□□□ -1.52
PRKDC-205ENST00000535375 NCKIPSDQ9NZQ3 722 aa5.54□□□□□ -1.52
PRKDC-205ENST00000535375 DHDHQ9UQ10 334 aa5.54□□□□□ -1.52
PRKDC-205ENST00000535375 LACTBL1A8MY62 500 aa5.53□□□□□ -1.52
PRKDC-205ENST00000535375 LDHAP00338 332 aaKnown RBP5.53□□□□□ -1.52
PRKDC-205ENST00000535375 ACP5P13686 325 aa5.53□□□□□ -1.52
PRKDC-205ENST00000535375 HOXB6P17509 224 aaKnown RBP5.53□□□□□ -1.52
PRKDC-205ENST00000535375 MLH1P40692 756 aa5.53□□□□□ -1.52
PRKDC-205ENST00000535375 PNPLA4P41247 253 aa5.53□□□□□ -1.52
PRKDC-205ENST00000535375 TRAPPC10P48553 1259 aa5.53□□□□□ -1.52
PRKDC-205ENST00000535375 RASSF2P50749 326 aa5.53□□□□□ -1.52
PRKDC-205ENST00000535375 GOLGA8FQ08AF8 430 aa5.53□□□□□ -1.52
PRKDC-205ENST00000535375 CUL4BQ13620 913 aa5.53□□□□□ -1.52
PRKDC-205ENST00000535375 TUBB8Q3ZCM7 444 aa5.53□□□□□ -1.52
PRKDC-205ENST00000535375 LCE1AQ5T7P2 110 aa5.53□□□□□ -1.52
PRKDC-205ENST00000535375 ANKRD45Q5TZF3 282 aa5.53□□□□□ -1.52
PRKDC-205ENST00000535375 AADACL2Q6P093 401 aa5.53□□□□□ -1.52
PRKDC-205ENST00000535375 PDXDC1Q6P996 788 aa5.53□□□□□ -1.52
PRKDC-205ENST00000535375 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.53□□□□□ -1.52
PRKDC-205ENST00000535375 BRSK2Q8IWQ3 736 aa5.53□□□□□ -1.52
PRKDC-205ENST00000535375 FBXL14Q8N1E6 418 aa5.53□□□□□ -1.52
PRKDC-205ENST00000535375 AFG1LQ8WV93 481 aa5.53□□□□□ -1.52
PRKDC-205ENST00000535375 OIT3Q8WWZ8 545 aa5.53□□□□□ -1.52
PRKDC-205ENST00000535375 SDCCAG3Q96C92 435 aa5.53□□□□□ -1.52
PRKDC-205ENST00000535375 CAMK1GQ96NX5 476 aa5.53□□□□□ -1.52
PRKDC-205ENST00000535375 TMEM204Q9BSN7 226 aa5.53□□□□□ -1.52
PRKDC-205ENST00000535375 SLC22A11Q9NSA0 550 aa5.53□□□□□ -1.52
PRKDC-205ENST00000535375 THAP1Q9NVV9 213 aa5.53□□□□□ -1.52
PRKDC-205ENST00000535375 ZDHHC7Q9NXF8 308 aa5.53□□□□□ -1.52
PRKDC-205ENST00000535375 CDH22Q9UJ99 828 aa5.53□□□□□ -1.52
PRKDC-205ENST00000535375 INSL5Q9Y5Q6 135 aa5.53□□□□□ -1.52
PRKDC-205ENST00000535375 CACNA1IQ9P0X4 2223 aa5.53□□□□□ -1.52
PRKDC-205ENST00000535375 TTC3P53804 2025 aa5.53□□□□□ -1.52
PRKDC-205ENST00000535375 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.52□□□□□ -1.53
PRKDC-205ENST00000535375 STMND1H3BQB6 276 aa5.52□□□□□ -1.53
PRKDC-205ENST00000535375 SMAD6O43541 496 aaKnown RBP5.52□□□□□ -1.53
PRKDC-205ENST00000535375 STRNO43815 780 aa5.52□□□□□ -1.53
PRKDC-205ENST00000535375 TNNT1P13805 278 aa5.52□□□□□ -1.53
PRKDC-205ENST00000535375 ARSBP15848 533 aa5.52□□□□□ -1.53
PRKDC-205ENST00000535375 PRKCHP24723 683 aa5.52□□□□□ -1.53
PRKDC-205ENST00000535375 AVPR2P30518 371 aa5.52□□□□□ -1.53
PRKDC-205ENST00000535375 ADD2P35612 726 aa5.52□□□□□ -1.53
PRKDC-205ENST00000535375 RFX2P48378 723 aa5.52□□□□□ -1.53
PRKDC-205ENST00000535375 TMPRSS3P57727 454 aa5.52□□□□□ -1.53
PRKDC-205ENST00000535375 NANOS2P60321 138 aaKnown RBP5.52□□□□□ -1.53
PRKDC-205ENST00000535375 ROR2Q01974 943 aaKnown RBP5.52□□□□□ -1.53
PRKDC-205ENST00000535375 POSTNQ15063 836 aa5.52□□□□□ -1.53
PRKDC-205ENST00000535375 ADCK5Q3MIX3 580 aa5.52□□□□□ -1.53
PRKDC-205ENST00000535375 OTUD1Q5VV17 481 aaPredicted RBP5.52□□□□□ -1.53
PRKDC-205ENST00000535375 DCAF12L2Q5VW00 463 aa5.52□□□□□ -1.53
PRKDC-205ENST00000535375 KIAA1161Q6NSJ0 714 aa5.52□□□□□ -1.53
PRKDC-205ENST00000535375 HORMAD2Q8N7B1 307 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms