RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 MEPCEQ7L2J0 689 aaKnown RBP3.92□□□□□ -1.78
USP48-215ENST00000534705 ANKRD13BQ86YJ7 626 aa3.92□□□□□ -1.78
USP48-215ENST00000534705 OR4N4Q8N0Y3 316 aa3.92□□□□□ -1.78
USP48-215ENST00000534705 ADPRHL1Q8NDY3 354 aa3.92□□□□□ -1.78
USP48-215ENST00000534705 WIPF2Q8TF74 440 aaPredicted RBP3.92□□□□□ -1.78
USP48-215ENST00000534705 SLC22A17Q8WUG5 538 aa3.92□□□□□ -1.78
USP48-215ENST00000534705 PIGKQ92643 395 aa3.92□□□□□ -1.78
USP48-215ENST00000534705 CELF1Q92879 486 aaKnown RBP3.92□□□□□ -1.78
USP48-215ENST00000534705 SLC39A13Q96H72 371 aa3.92□□□□□ -1.78
USP48-215ENST00000534705 ZFYVE19Q96K21 471 aa3.92□□□□□ -1.78
USP48-215ENST00000534705 TESK2Q96S53 571 aa3.92□□□□□ -1.78
USP48-215ENST00000534705 PRPF18Q99633 342 aaKnown RBP3.92□□□□□ -1.78
USP48-215ENST00000534705 TRIM2Q9C040 744 aa3.92□□□□□ -1.78
USP48-215ENST00000534705 WDR12Q9GZL7 423 aaKnown RBP3.92□□□□□ -1.78
USP48-215ENST00000534705 VPS4AQ9UN37 437 aa3.92□□□□□ -1.78
USP48-215ENST00000534705 LRCH1Q9Y2L9 728 aa3.92□□□□□ -1.78
USP48-215ENST00000534705 HEMK1Q9Y5R4 338 aaPredicted RBP3.92□□□□□ -1.78
USP48-215ENST00000534705 TUBGCP6Q96RT7 1819 aa3.92□□□□□ -1.78
USP48-215ENST00000534705 EMSYQ7Z589 1322 aa3.92□□□□□ -1.78
USP48-215ENST00000534705 ABCC6O95255 1503 aa3.91□□□□□ -1.78
USP48-215ENST00000534705 TAF1LQ8IZX4 1826 aa3.91□□□□□ -1.78
USP48-215ENST00000534705 A0A087WV62 115 aa3.91□□□□□ -1.78
USP48-215ENST00000534705 LY6G6EA0A0G2JKS1 128 aa3.91□□□□□ -1.78
USP48-215ENST00000534705 ABHD14A-ACY1A0A1B0GW23 586 aa3.91□□□□□ -1.78
USP48-215ENST00000534705 TMEM191BP0C7N4 346 aa3.91□□□□□ -1.78
USP48-215ENST00000534705 SERPINB3P29508 390 aa3.91□□□□□ -1.78
USP48-215ENST00000534705 STAT6P42226 847 aa3.91□□□□□ -1.78
USP48-215ENST00000534705 AGTR2P50052 363 aa3.91□□□□□ -1.78
USP48-215ENST00000534705 POLE2P56282 527 aa3.91□□□□□ -1.78
USP48-215ENST00000534705 B4GALNT1Q00973 533 aa3.91□□□□□ -1.78
USP48-215ENST00000534705 STIM1Q13586 685 aa3.91□□□□□ -1.78
USP48-215ENST00000534705 SPARCL1Q14515 664 aa3.91□□□□□ -1.78
USP48-215ENST00000534705 GRM4Q14833 912 aa3.91□□□□□ -1.78
USP48-215ENST00000534705 NUP188Q5SRE5 1749 aa3.91□□□□□ -1.78
USP48-215ENST00000534705 SYCP2LQ5T4T6 812 aa3.91□□□□□ -1.78
USP48-215ENST00000534705 PGBD2Q6P3X8 592 aa3.91□□□□□ -1.78
USP48-215ENST00000534705 ZNF474Q6S9Z5 364 aaPredicted RBP3.91□□□□□ -1.78
USP48-215ENST00000534705 RINLQ6ZS11 566 aa3.91□□□□□ -1.78
USP48-215ENST00000534705 FAM57BQ71RH2 274 aa3.91□□□□□ -1.78
USP48-215ENST00000534705 NANOGP1Q8N7R0 232 aa3.91□□□□□ -1.78
USP48-215ENST00000534705 ZBTB8BQ8NAP8 495 aaPredicted RBP3.91□□□□□ -1.78
USP48-215ENST00000534705 SRFBP1Q8NEF9 429 aaKnown RBP3.91□□□□□ -1.78
USP48-215ENST00000534705 TRMOQ9BU70 441 aa3.91□□□□□ -1.78
USP48-215ENST00000534705 ELOVL1Q9BW60 279 aa3.91□□□□□ -1.78
USP48-215ENST00000534705 MLXIPLQ9NP71 852 aa3.91□□□□□ -1.78
USP48-215ENST00000534705 PAPOLBQ9NRJ5 636 aaKnown RBP3.91□□□□□ -1.78
USP48-215ENST00000534705 ZBTB1Q9Y2K1 713 aa3.91□□□□□ -1.78
USP48-215ENST00000534705 AFG3L2Q9Y4W6 797 aa3.91□□□□□ -1.78
USP48-215ENST00000534705 BTAF1O14981 1849 aa3.91□□□□□ -1.78
USP48-215ENST00000534705 BRD4O60885 1362 aaPredicted RBP3.9□□□□□ -1.78
USP48-215ENST00000534705 USP47Q96K76 1375 aa3.9□□□□□ -1.78
USP48-215ENST00000534705 PKD1L3Q7Z443 1732 aa3.9□□□□□ -1.78
USP48-215ENST00000534705 DOT1LQ8TEK3 1739 aa3.9□□□□□ -1.78
USP48-215ENST00000534705 DLG5Q8TDM6 1919 aa3.9□□□□□ -1.78
USP48-215ENST00000534705 OVOS2A0A0J9YW53 1432 aa3.9□□□□□ -1.78
USP48-215ENST00000534705 OVOS2Q6IE36 1432 aa3.9□□□□□ -1.78
USP48-215ENST00000534705 SLC22A23A1A5C7 686 aa3.9□□□□□ -1.79
USP48-215ENST00000534705 F8W810 466 aa3.9□□□□□ -1.79
USP48-215ENST00000534705 ADAM10O14672 748 aa3.9□□□□□ -1.79
USP48-215ENST00000534705 PIP5K1BO14986 540 aa3.9□□□□□ -1.79
USP48-215ENST00000534705 ASNA1O43681 348 aa3.9□□□□□ -1.79
USP48-215ENST00000534705 TLX3O43711 291 aaPredicted RBP3.9□□□□□ -1.79
USP48-215ENST00000534705 PPP6R2O75170 966 aa3.9□□□□□ -1.79
USP48-215ENST00000534705 SKAP2O75563 359 aaPredicted RBP3.9□□□□□ -1.79
USP48-215ENST00000534705 RPP40O75818 363 aaKnown RBP3.9□□□□□ -1.79
USP48-215ENST00000534705 LARGE1O95461 756 aa3.9□□□□□ -1.79
USP48-215ENST00000534705 ALDOAP04075 364 aaKnown RBP3.9□□□□□ -1.79
USP48-215ENST00000534705 CYP3A4P08684 503 aa3.9□□□□□ -1.79
USP48-215ENST00000534705 KRT10P13645 584 aa3.9□□□□□ -1.79
USP48-215ENST00000534705 AKR1A1P14550 325 aa3.9□□□□□ -1.79
USP48-215ENST00000534705 HOXD9P28356 352 aaPredicted RBP3.9□□□□□ -1.79
USP48-215ENST00000534705 RHBDL3P58872 404 aa3.9□□□□□ -1.79
USP48-215ENST00000534705 ZNF91Q05481 1191 aa3.9□□□□□ -1.79
USP48-215ENST00000534705 MTA1Q13330 715 aa3.9□□□□□ -1.79
USP48-215ENST00000534705 MORC3Q14149 939 aa3.9□□□□□ -1.79
USP48-215ENST00000534705 RBMS2Q15434 407 aaKnown RBP3.9□□□□□ -1.79
USP48-215ENST00000534705 ZACNQ401N2 412 aa3.9□□□□□ -1.79
USP48-215ENST00000534705 ZNF772Q68DY9 489 aaPredicted RBP3.9□□□□□ -1.79
USP48-215ENST00000534705 RINT1Q6NUQ1 792 aa3.9□□□□□ -1.79
USP48-215ENST00000534705 TMEM88Q6PEY1 159 aa3.9□□□□□ -1.79
USP48-215ENST00000534705 SLC39A5Q6ZMH5 540 aa3.9□□□□□ -1.79
USP48-215ENST00000534705 ARFGAP1Q8N6T3 406 aa3.9□□□□□ -1.79
USP48-215ENST00000534705 FAM47BQ8NA70 645 aa3.9□□□□□ -1.79
USP48-215ENST00000534705 ZNF527Q8NB42 609 aa3.9□□□□□ -1.79
USP48-215ENST00000534705 OR52N4Q8NGI2 321 aa3.9□□□□□ -1.79
USP48-215ENST00000534705 KAT2BQ92831 832 aa3.9□□□□□ -1.79
USP48-215ENST00000534705 TRMT61AQ96FX7 289 aaKnown RBP3.9□□□□□ -1.79
USP48-215ENST00000534705 RPS6KC1Q96S38 1066 aa3.9□□□□□ -1.79
USP48-215ENST00000534705 KATNAL1Q9BW62 490 aa3.9□□□□□ -1.79
USP48-215ENST00000534705 CDC23Q9UJX2 597 aa3.9□□□□□ -1.79
USP48-215ENST00000534705 COMMD10Q9Y6G5 202 aa3.9□□□□□ -1.79
USP48-215ENST00000534705 EVC2Q86UK5 1308 aa3.9□□□□□ -1.79
USP48-215ENST00000534705 LY75O60449 1722 aa3.9□□□□□ -1.79
USP48-215ENST00000534705 QSER1Q2KHR3 1735 aa3.9□□□□□ -1.79
USP48-215ENST00000534705 TOGARAM1Q9Y4F4 1720 aa3.9□□□□□ -1.79
USP48-215ENST00000534705 A0A1W2PP64 1363 aa3.89□□□□□ -1.79
USP48-215ENST00000534705 CPDO75976 1380 aa3.89□□□□□ -1.79
USP48-215ENST00000534705 CYP3A7-CYP3A51PA0A087WV96 503 aa3.89□□□□□ -1.79
USP48-215ENST00000534705 MBD3L5A6NJ08 208 aaPredicted RBP3.89□□□□□ -1.79
USP48-215ENST00000534705 AQP12BA6NM10 295 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms