RNA–Protein interactions for RNA: ENST00000533961.1

RDX-215, Transcript of radixin, human

TSL 2

Gene RDX, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RDX-215	ENST00000533961	CHN1	P15882	459 aa		3.75	□□□□□ -1.81
RDX-215	ENST00000533961	TYK2	P29597	1187 aa		3.75	□□□□□ -1.81
RDX-215	ENST00000533961	PTPN9	P43378	593 aa		3.75	□□□□□ -1.81
RDX-215	ENST00000533961	MAPK9	P45984	424 aa		3.75	□□□□□ -1.81
RDX-215	ENST00000533961	AARS	P49588	968 aa	Known RBP eCLIP	3.75	□□□□□ -1.81
RDX-215	ENST00000533961	PPM1F	P49593	454 aa	Predicted RBP	3.75	□□□□□ -1.81
RDX-215	ENST00000533961	PWP2	Q15269	919 aa	Known RBP	3.75	□□□□□ -1.81
RDX-215	ENST00000533961	INPP5J	Q15735	1006 aa	Predicted RBP	3.75	□□□□□ -1.81
RDX-215	ENST00000533961	FBXO43	Q4G163	708 aa		3.75	□□□□□ -1.81
RDX-215	ENST00000533961	TTC39A	Q5SRH9	613 aa		3.75	□□□□□ -1.81
RDX-215	ENST00000533961	GORAB	Q5T7V8	394 aa		3.75	□□□□□ -1.81
RDX-215	ENST00000533961	NUGGC	Q68CJ6	796 aa		3.75	□□□□□ -1.81
RDX-215	ENST00000533961	HMBOX1	Q6NT76	420 aa		3.75	□□□□□ -1.81
RDX-215	ENST00000533961	MTFR2	Q6P444	385 aa		3.75	□□□□□ -1.81
RDX-215	ENST00000533961	CPO	Q8IVL8	374 aa		3.75	□□□□□ -1.81
RDX-215	ENST00000533961	HERC6	Q8IVU3	1022 aa		3.75	□□□□□ -1.81
RDX-215	ENST00000533961	PAQR4	Q8N4S7	273 aa	Predicted RBP	3.75	□□□□□ -1.81
RDX-215	ENST00000533961	SPATA5	Q8NB90	893 aa		3.75	□□□□□ -1.81
RDX-215	ENST00000533961	ZNF548	Q8NEK5	533 aa	Predicted RBP	3.75	□□□□□ -1.81
RDX-215	ENST00000533961	ZNF419	Q96HQ0	510 aa	Predicted RBP	3.75	□□□□□ -1.81
RDX-215	ENST00000533961	CTAGE1	Q96RT6	745 aa		3.75	□□□□□ -1.81
RDX-215	ENST00000533961	EIF2AK1	Q9BQI3	630 aa	Known RBP	3.75	□□□□□ -1.81
RDX-215	ENST00000533961	TMEM204	Q9BSN7	226 aa		3.75	□□□□□ -1.81
RDX-215	ENST00000533961	FRMD8	Q9BZ67	464 aa	Predicted RBP	3.75	□□□□□ -1.81
RDX-215	ENST00000533961	CTDSP1	Q9GZU7	261 aa		3.75	□□□□□ -1.81
RDX-215	ENST00000533961	TTYH1	Q9H313	450 aa	Predicted RBP	3.75	□□□□□ -1.81
RDX-215	ENST00000533961	SFXN1	Q9H9B4	322 aa		3.75	□□□□□ -1.81
RDX-215	ENST00000533961	SAYSD1	Q9NPB0	183 aa		3.75	□□□□□ -1.81
RDX-215	ENST00000533961	G6PC2	Q9NQR9	355 aa		3.75	□□□□□ -1.81
RDX-215	ENST00000533961	ZBTB40	Q9NUA8	1239 aa		3.75	□□□□□ -1.81
RDX-215	ENST00000533961	NDUFAF4	Q9P032	175 aa		3.75	□□□□□ -1.81
RDX-215	ENST00000533961	HDAC6	Q9UBN7	1215 aa		3.75	□□□□□ -1.81
RDX-215	ENST00000533961	DNAJC16	Q9Y2G8	782 aa		3.75	□□□□□ -1.81
RDX-215	ENST00000533961	LMTK3	Q96Q04	1460 aa		3.74	□□□□□ -1.81
RDX-215	ENST00000533961		A0A0A0MQY5	61 aa		3.74	□□□□□ -1.81
RDX-215	ENST00000533961		A6NNC1	897 aa		3.74	□□□□□ -1.81
RDX-215	ENST00000533961	C17orf100	A8MU93	164 aa		3.74	□□□□□ -1.81
RDX-215	ENST00000533961	KLK10	O43240	276 aa		3.74	□□□□□ -1.81
RDX-215	ENST00000533961	FAM155B	O75949	473 aa		3.74	□□□□□ -1.81
RDX-215	ENST00000533961	KLKB1	P03952	638 aa		3.74	□□□□□ -1.81
RDX-215	ENST00000533961	IGFBP2	P18065	325 aa		3.74	□□□□□ -1.81
RDX-215	ENST00000533961	POLD2	P49005	469 aa		3.74	□□□□□ -1.81
RDX-215	ENST00000533961	NANOS2	P60321	138 aa	Known RBP	3.74	□□□□□ -1.81
RDX-215	ENST00000533961	SLC12A1	Q13621	1099 aa		3.74	□□□□□ -1.81
RDX-215	ENST00000533961	DCTN1	Q14203	1278 aa		3.74	□□□□□ -1.81
RDX-215	ENST00000533961	SMAD1	Q15797	465 aa	Known RBP	3.74	□□□□□ -1.81
RDX-215	ENST00000533961	AP5B1	Q2VPB7	878 aa		3.74	□□□□□ -1.81
RDX-215	ENST00000533961	KIAA1755	Q5JYT7	1200 aa		3.74	□□□□□ -1.81
RDX-215	ENST00000533961	SH2D4B	Q5SQS7	431 aa		3.74	□□□□□ -1.81
RDX-215	ENST00000533961	RFX8	Q6ZV50	586 aa		3.74	□□□□□ -1.81
RDX-215	ENST00000533961	TMEM200A	Q86VY9	491 aa		3.74	□□□□□ -1.81
RDX-215	ENST00000533961	CCDC25	Q86WR0	208 aa		3.74	□□□□□ -1.81
RDX-215	ENST00000533961	OR6Y1	Q8NGX8	325 aa		3.74	□□□□□ -1.81
RDX-215	ENST00000533961	KTI12	Q96EK9	354 aa	Predicted RBP	3.74	□□□□□ -1.81
RDX-215	ENST00000533961	THOC3	Q96J01	351 aa	Known RBP	3.74	□□□□□ -1.81
RDX-215	ENST00000533961	PIMREG	Q9BSJ6	248 aa		3.74	□□□□□ -1.81
RDX-215	ENST00000533961	LDHAL6B	Q9BYZ2	381 aa	Predicted RBP	3.74	□□□□□ -1.81
RDX-215	ENST00000533961	TRIM31	Q9BZY9	425 aa		3.74	□□□□□ -1.81
RDX-215	ENST00000533961	IL21R	Q9HBE5	538 aa		3.74	□□□□□ -1.81
RDX-215	ENST00000533961	THSD1	Q9NS62	852 aa		3.74	□□□□□ -1.81
RDX-215	ENST00000533961	MSRB1	Q9NZV6	116 aa		3.74	□□□□□ -1.81
RDX-215	ENST00000533961	KL	Q9UEF7	1012 aa		3.74	□□□□□ -1.81
RDX-215	ENST00000533961	PLEKHB1	Q9UF11	243 aa	Predicted RBP	3.74	□□□□□ -1.81
RDX-215	ENST00000533961	COG5	Q9UP83	839 aa		3.74	□□□□□ -1.81
RDX-215	ENST00000533961	TCF20	Q9UGU0	1960 aa	Known RBP	3.73	□□□□□ -1.81
RDX-215	ENST00000533961	CYP3A7-CYP3A51P	A0A087WV96	503 aa		3.73	□□□□□ -1.81
RDX-215	ENST00000533961	RRN3P2	A6NIE6	340 aa		3.73	□□□□□ -1.81
RDX-215	ENST00000533961	MBD3L5	A6NJ08	208 aa	Predicted RBP	3.73	□□□□□ -1.81
RDX-215	ENST00000533961	EFCAB8	A8MWE9	144 aa		3.73	□□□□□ -1.81
RDX-215	ENST00000533961	SMAD6	O43541	496 aa	Known RBP	3.73	□□□□□ -1.81
RDX-215	ENST00000533961	NFATC1	O95644	943 aa		3.73	□□□□□ -1.81
RDX-215	ENST00000533961	IFNA2	P01563	188 aa		3.73	□□□□□ -1.81
RDX-215	ENST00000533961	FGF2	P09038	288 aa		3.73	□□□□□ -1.81
RDX-215	ENST00000533961	CHRNB1	P11230	501 aa		3.73	□□□□□ -1.81
RDX-215	ENST00000533961	CYP3A7	P24462	503 aa		3.73	□□□□□ -1.81
RDX-215	ENST00000533961	CIITA	P33076	1130 aa		3.73	□□□□□ -1.81
RDX-215	ENST00000533961	CDK7	P50613	346 aa		3.73	□□□□□ -1.81
RDX-215	ENST00000533961	ACTR2	P61160	394 aa		3.73	□□□□□ -1.81
RDX-215	ENST00000533961	BIRC3	Q13489	604 aa		3.73	□□□□□ -1.81
RDX-215	ENST00000533961	PIK3CD-AS1	Q5SR53	167 aa		3.73	□□□□□ -1.81
RDX-215	ENST00000533961	ANKRD45	Q5TZF3	282 aa		3.73	□□□□□ -1.81
RDX-215	ENST00000533961	NAPEPLD	Q6IQ20	393 aa		3.73	□□□□□ -1.81
RDX-215	ENST00000533961	SMC5	Q8IY18	1101 aa		3.73	□□□□□ -1.81
RDX-215	ENST00000533961	SLC2A12	Q8TD20	617 aa		3.73	□□□□□ -1.81
RDX-215	ENST00000533961	THAP4	Q8WY91	577 aa		3.73	□□□□□ -1.81
RDX-215	ENST00000533961	LPAR1	Q92633	364 aa		3.73	□□□□□ -1.81
RDX-215	ENST00000533961	SLC25A28	Q96A46	364 aa		3.73	□□□□□ -1.81
RDX-215	ENST00000533961	WBP1	Q96G27	269 aa		3.73	□□□□□ -1.81
RDX-215	ENST00000533961	PIGS	Q96S52	555 aa		3.73	□□□□□ -1.81
RDX-215	ENST00000533961	MEIS3	Q99687	375 aa		3.73	□□□□□ -1.81
RDX-215	ENST00000533961	HIPK2	Q9H2X6	1198 aa		3.73	□□□□□ -1.81
RDX-215	ENST00000533961	RNF146	Q9NTX7	359 aa		3.73	□□□□□ -1.81
RDX-215	ENST00000533961	THAP1	Q9NVV9	213 aa		3.73	□□□□□ -1.81
RDX-215	ENST00000533961	SLC25A13	Q9UJS0	675 aa		3.73	□□□□□ -1.81
RDX-215	ENST00000533961	SLC8A2	Q9UPR5	921 aa		3.73	□□□□□ -1.81
RDX-215	ENST00000533961	ICK	Q9UPZ9	632 aa		3.73	□□□□□ -1.81
RDX-215	ENST00000533961	RRP7A	Q9Y3A4	280 aa	Known RBP	3.73	□□□□□ -1.81
RDX-215	ENST00000533961	PKP3	Q9Y446	797 aa		3.73	□□□□□ -1.81
RDX-215	ENST00000533961	TARSL2	A2RTX5	802 aa	Known RBP	3.72	□□□□□ -1.81
RDX-215	ENST00000533961	KRTAP9-6	A8MVA2	160 aa		3.72	□□□□□ -1.81

Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms