RNA–Protein interactions for RNA: ENST00000533811.1

PACS1-214, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 3

Gene PACS1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-214ENST00000533811 PREBQ9HCU5 417 aa9.52□□□□□ -0.89
PACS1-214ENST00000533811 ST7Q9NRC1 585 aa9.52□□□□□ -0.89
PACS1-214ENST00000533811 IL17BQ9UHF5 180 aa9.52□□□□□ -0.89
PACS1-214ENST00000533811 NAALADL1Q9UQQ1 740 aa9.52□□□□□ -0.89
PACS1-214ENST00000533811 TLR6Q9Y2C9 796 aa9.52□□□□□ -0.89
PACS1-214ENST00000533811 COL27A1Q8IZC6 1860 aaPredicted RBP9.51□□□□□ -0.89
PACS1-214ENST00000533811 SYNJ2BP-COX16A0A087WUM0 186 aa9.51□□□□□ -0.89
PACS1-214ENST00000533811 LY6G6EA0A0G2JKS1 128 aa9.51□□□□□ -0.89
PACS1-214ENST00000533811 A0A1B0GVL5 298 aa9.51□□□□□ -0.89
PACS1-214ENST00000533811 A0A1W2PNU3 283 aaPredicted RBP9.51□□□□□ -0.89
PACS1-214ENST00000533811 NEMP2A6NFY4 417 aa9.51□□□□□ -0.89
PACS1-214ENST00000533811 K7ESM1 405 aa9.51□□□□□ -0.89
PACS1-214ENST00000533811 KPNA3O00505 521 aaPredicted RBP9.51□□□□□ -0.89
PACS1-214ENST00000533811 FBXO21O94952 628 aa9.51□□□□□ -0.89
PACS1-214ENST00000533811 CALCAP01258 141 aa9.51□□□□□ -0.89
PACS1-214ENST00000533811 GP1BAP07359 652 aa9.51□□□□□ -0.89
PACS1-214ENST00000533811 PRR29P0C7W0 189 aa9.51□□□□□ -0.89
PACS1-214ENST00000533811 GIMD1P0DJR0 217 aa9.51□□□□□ -0.89
PACS1-214ENST00000533811 HNRNPA2B1P22626 353 aaKnown RBP9.51□□□□□ -0.89
PACS1-214ENST00000533811 ENPEPQ07075 957 aa9.51□□□□□ -0.89
PACS1-214ENST00000533811 DLG2Q15700 870 aa9.51□□□□□ -0.89
PACS1-214ENST00000533811 CBWD6Q4V339 395 aa9.51□□□□□ -0.89
PACS1-214ENST00000533811 CBWD3Q5JTY5 395 aa9.51□□□□□ -0.89
PACS1-214ENST00000533811 CBWD5Q5RIA9 395 aa9.51□□□□□ -0.89
PACS1-214ENST00000533811 GUSBP11Q6P575 273 aa9.51□□□□□ -0.89
PACS1-214ENST00000533811 TMEM270Q6UE05 265 aa9.51□□□□□ -0.89
PACS1-214ENST00000533811 LCLAT1Q6UWP7 414 aa9.51□□□□□ -0.89
PACS1-214ENST00000533811 RBM44Q6ZP01 1051 aaKnown RBP9.51□□□□□ -0.89
PACS1-214ENST00000533811 CCAR2Q8N163 923 aaKnown RBP9.51□□□□□ -0.89
PACS1-214ENST00000533811 TMEM145Q8NBT3 493 aa9.51□□□□□ -0.89
PACS1-214ENST00000533811 FRS2Q8WU20 508 aa9.51□□□□□ -0.89
PACS1-214ENST00000533811 SNRNP27Q8WVK2 155 aaKnown RBP9.51□□□□□ -0.89
PACS1-214ENST00000533811 TFAP2BQ92481 460 aa9.51□□□□□ -0.89
PACS1-214ENST00000533811 RNF34Q969K3 372 aa9.51□□□□□ -0.89
PACS1-214ENST00000533811 SLC39A13Q96H72 371 aa9.51□□□□□ -0.89
PACS1-214ENST00000533811 SLC46A1Q96NT5 459 aa9.51□□□□□ -0.89
PACS1-214ENST00000533811 ARHGAP9Q9BRR9 750 aa9.51□□□□□ -0.89
PACS1-214ENST00000533811 DUSP23Q9BVJ7 150 aa9.51□□□□□ -0.89
PACS1-214ENST00000533811 USP29Q9HBJ7 922 aa9.51□□□□□ -0.89
PACS1-214ENST00000533811 DYRK4Q9NR20 520 aa9.51□□□□□ -0.89
PACS1-214ENST00000533811 COX16Q9P0S2 106 aa9.51□□□□□ -0.89
PACS1-214ENST00000533811 PCDHB4Q9Y5E5 795 aa9.51□□□□□ -0.89
PACS1-214ENST00000533811 ENTPD2Q9Y5L3 495 aa9.51□□□□□ -0.89
PACS1-214ENST00000533811 U3KQA8 63 aa9.51□□□□□ -0.89
PACS1-214ENST00000533811 AHCTF1Q8WYP5 2266 aa9.51□□□□□ -0.89
PACS1-214ENST00000533811 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.5□□□□□ -0.89
PACS1-214ENST00000533811 A6NNZ2 444 aa9.5□□□□□ -0.89
PACS1-214ENST00000533811 H3BM21 787 aa9.5□□□□□ -0.89
PACS1-214ENST00000533811 SCAMP1O15126 338 aa9.5□□□□□ -0.89
PACS1-214ENST00000533811 CETN3O15182 167 aa9.5□□□□□ -0.89
PACS1-214ENST00000533811 TNFSF15O95150 251 aa9.5□□□□□ -0.89
PACS1-214ENST00000533811 PFKFB1P16118 471 aa9.5□□□□□ -0.89
PACS1-214ENST00000533811 TAS2R38P59533 333 aa9.5□□□□□ -0.89
PACS1-214ENST00000533811 HNRNPKP61978 463 aaKnown RBP eCLIP9.5□□□□□ -0.89
PACS1-214ENST00000533811 CLN3Q13286 438 aa9.5□□□□□ -0.89
PACS1-214ENST00000533811 ZNF177Q13360 481 aaPredicted RBP9.5□□□□□ -0.89
PACS1-214ENST00000533811 NNTQ13423 1086 aa9.5□□□□□ -0.89
PACS1-214ENST00000533811 SLC12A1Q13621 1099 aa9.5□□□□□ -0.89
PACS1-214ENST00000533811 BECN1Q14457 450 aa9.5□□□□□ -0.89
PACS1-214ENST00000533811 DRAP1Q14919 205 aaPredicted RBP9.5□□□□□ -0.89
PACS1-214ENST00000533811 DEFB133Q30KQ1 61 aa9.5□□□□□ -0.89
PACS1-214ENST00000533811 PIP5KL1Q5T9C9 394 aa9.5□□□□□ -0.89
PACS1-214ENST00000533811 GCNT7Q6ZNI0 430 aa9.5□□□□□ -0.89
PACS1-214ENST00000533811 Q6ZSR6 202 aa9.5□□□□□ -0.89
PACS1-214ENST00000533811 HORMAD1Q86X24 394 aa9.5□□□□□ -0.89
PACS1-214ENST00000533811 JAMLQ86YT9 394 aa9.5□□□□□ -0.89
PACS1-214ENST00000533811 LURAP1LQ8IV03 231 aa9.5□□□□□ -0.89
PACS1-214ENST00000533811 HSCBQ8IWL3 235 aa9.5□□□□□ -0.89
PACS1-214ENST00000533811 SLC22A18ASQ8N1D0 253 aa9.5□□□□□ -0.89
PACS1-214ENST00000533811 ARL14Q8N4G2 192 aa9.5□□□□□ -0.89
PACS1-214ENST00000533811 ATP6V0D2Q8N8Y2 350 aa9.5□□□□□ -0.89
PACS1-214ENST00000533811 EXD3Q8N9H8 876 aa9.5□□□□□ -0.89
PACS1-214ENST00000533811 ZNF548Q8NEK5 533 aaPredicted RBP9.5□□□□□ -0.89
PACS1-214ENST00000533811 SLC35F5Q8WV83 523 aa9.5□□□□□ -0.89
PACS1-214ENST00000533811 ERCC4Q92889 916 aaPredicted RBP9.5□□□□□ -0.89
PACS1-214ENST00000533811 FAM131CQ96AQ9 280 aa9.5□□□□□ -0.89
PACS1-214ENST00000533811 BTN2A3PQ96KV6 586 aa9.5□□□□□ -0.89
PACS1-214ENST00000533811 IPO11Q9UI26 975 aaKnown RBP9.5□□□□□ -0.89
PACS1-214ENST00000533811 VPS28Q9UK41 221 aa9.5□□□□□ -0.89
PACS1-214ENST00000533811 KIAA1257Q9ULG3 409 aa9.5□□□□□ -0.89
PACS1-214ENST00000533811 PPM1HQ9ULR3 514 aa9.5□□□□□ -0.89
PACS1-214ENST00000533811 FARP1Q9Y4F1 1045 aaPredicted RBP9.5□□□□□ -0.89
PACS1-214ENST00000533811 TCAF2A6NFQ2 919 aa9.49□□□□□ -0.89
PACS1-214ENST00000533811 MCF2LO15068 1137 aa9.49□□□□□ -0.89
PACS1-214ENST00000533811 MUSKO15146 869 aa9.49□□□□□ -0.89
PACS1-214ENST00000533811 ALOX15BO15296 676 aa9.49□□□□□ -0.89
PACS1-214ENST00000533811 ATP9BO43861 1147 aa9.49□□□□□ -0.89
PACS1-214ENST00000533811 RHOBTB3O94955 611 aa9.49□□□□□ -0.89
PACS1-214ENST00000533811 FYNP06241 537 aa9.49□□□□□ -0.89
PACS1-214ENST00000533811 TBXAS1P24557 533 aaPredicted RBP9.49□□□□□ -0.89
PACS1-214ENST00000533811 CENPCQ03188 943 aa9.49□□□□□ -0.89
PACS1-214ENST00000533811 SRSF1Q07955 248 aaKnown RBP eCLIP9.49□□□□□ -0.89
PACS1-214ENST00000533811 NR0B2Q15466 257 aa9.49□□□□□ -0.89
PACS1-214ENST00000533811 ZNF284Q2VY69 593 aa9.49□□□□□ -0.89
PACS1-214ENST00000533811 COLEC12Q5KU26 742 aa9.49□□□□□ -0.89
PACS1-214ENST00000533811 RABGAP1LQ5R372 815 aa9.49□□□□□ -0.89
PACS1-214ENST00000533811 PERM1Q5SV97 790 aa9.49□□□□□ -0.89
PACS1-214ENST00000533811 SYPL2Q5VXT5 272 aa9.49□□□□□ -0.89
PACS1-214ENST00000533811 SEL1L3Q68CR1 1132 aa9.49□□□□□ -0.89
PACS1-214ENST00000533811 CXorf57Q6NSI4 855 aaKnown RBP9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms