RNA–Protein interactions for RNA: ENST00000533728.1

CHKA-207, Transcript of choline kinase alpha, humanhuman

TSL 2

Gene CHKA, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-207ENST00000533728 ITPR3Q14573 2671 aa9.9□□□□□ -0.82
CHKA-207ENST00000533728 MYO10Q9HD67 2058 aa9.89□□□□□ -0.83
CHKA-207ENST00000533728 DMXL2Q8TDJ6 3036 aa9.89□□□□□ -0.83
CHKA-207ENST00000533728 FANCMQ8IYD8 2048 aa9.89□□□□□ -0.83
CHKA-207ENST00000533728 FOXO6A8MYZ6 492 aa9.89□□□□□ -0.83
CHKA-207ENST00000533728 TRIM49D1C9J1S8 452 aa9.89□□□□□ -0.83
CHKA-207ENST00000533728 TAF4O00268 1085 aa9.89□□□□□ -0.83
CHKA-207ENST00000533728 COPEO14579 308 aa9.89□□□□□ -0.83
CHKA-207ENST00000533728 CACNG3O60359 315 aa9.89□□□□□ -0.83
CHKA-207ENST00000533728 UBOX5O94941 541 aa9.89□□□□□ -0.83
CHKA-207ENST00000533728 PARNO95453 639 aaKnown RBP9.89□□□□□ -0.83
CHKA-207ENST00000533728 AP2A1O95782 977 aa9.89□□□□□ -0.83
CHKA-207ENST00000533728 CTSHP09668 335 aa9.89□□□□□ -0.83
CHKA-207ENST00000533728 NCAM1P13591 858 aa9.89□□□□□ -0.83
CHKA-207ENST00000533728 ERCC2P18074 760 aa9.89□□□□□ -0.83
CHKA-207ENST00000533728 CD52P31358 61 aa9.89□□□□□ -0.83
CHKA-207ENST00000533728 CRHR1P34998 444 aa9.89□□□□□ -0.83
CHKA-207ENST00000533728 NPY2RP49146 381 aa9.89□□□□□ -0.83
CHKA-207ENST00000533728 NRLP54845 237 aa9.89□□□□□ -0.83
CHKA-207ENST00000533728 FAM189BP81408 668 aa9.89□□□□□ -0.83
CHKA-207ENST00000533728 NIPAL4Q0D2K0 466 aa9.89□□□□□ -0.83
CHKA-207ENST00000533728 IFRD2Q12894 506 aaPredicted RBP9.89□□□□□ -0.83
CHKA-207ENST00000533728 MTA1Q13330 715 aa9.89□□□□□ -0.83
CHKA-207ENST00000533728 PPP2R5DQ14738 602 aa9.89□□□□□ -0.83
CHKA-207ENST00000533728 COL19A1Q14993 1142 aa9.89□□□□□ -0.83
CHKA-207ENST00000533728 ACBD5Q5T8D3 534 aaPredicted RBP9.89□□□□□ -0.83
CHKA-207ENST00000533728 FAM91A1Q658Y4 838 aa9.89□□□□□ -0.83
CHKA-207ENST00000533728 OVOS1Q6IE37 1185 aa9.89□□□□□ -0.83
CHKA-207ENST00000533728 KYAT3Q6YP21 454 aaKnown RBP9.89□□□□□ -0.83
CHKA-207ENST00000533728 CCDC117Q8IWD4 279 aaPredicted RBP9.89□□□□□ -0.83
CHKA-207ENST00000533728 ZNF567Q8N184 647 aa9.89□□□□□ -0.83
CHKA-207ENST00000533728 PYROXD2Q8N2H3 581 aa9.89□□□□□ -0.83
CHKA-207ENST00000533728 PPM1NQ8N819 430 aa9.89□□□□□ -0.83
CHKA-207ENST00000533728 CCDC63Q8NA47 563 aa9.89□□□□□ -0.83
CHKA-207ENST00000533728 C10orf82Q8WW14 230 aa9.89□□□□□ -0.83
CHKA-207ENST00000533728 LPPQ93052 612 aa9.89□□□□□ -0.83
CHKA-207ENST00000533728 FATE1Q969F0 183 aa9.89□□□□□ -0.83
CHKA-207ENST00000533728 FUBP3Q96I24 572 aaKnown RBP eCLIP9.89□□□□□ -0.83
CHKA-207ENST00000533728 ADAM2Q99965 735 aa9.89□□□□□ -0.83
CHKA-207ENST00000533728 WDCPQ9H6R7 721 aa9.89□□□□□ -0.83
CHKA-207ENST00000533728 MANSC1Q9H8J5 431 aa9.89□□□□□ -0.83
CHKA-207ENST00000533728 PLAC1Q9HBJ0 212 aa9.89□□□□□ -0.83
CHKA-207ENST00000533728 MLXIPLQ9NP71 852 aa9.89□□□□□ -0.83
CHKA-207ENST00000533728 SAR1AQ9NR31 198 aa9.89□□□□□ -0.83
CHKA-207ENST00000533728 ABCC13Q9NSE7 274 aa9.89□□□□□ -0.83
CHKA-207ENST00000533728 TXLNGQ9NUQ3 528 aa9.89□□□□□ -0.83
CHKA-207ENST00000533728 ABCF3Q9NUQ8 709 aa9.89□□□□□ -0.83
CHKA-207ENST00000533728 RNF19AQ9NV58 838 aa9.89□□□□□ -0.83
CHKA-207ENST00000533728 DDIT4Q9NX09 232 aa9.89□□□□□ -0.83
CHKA-207ENST00000533728 DONSONQ9NYP3 566 aa9.89□□□□□ -0.83
CHKA-207ENST00000533728 ADAM28Q9UKQ2 775 aa9.89□□□□□ -0.83
CHKA-207ENST00000533728 GRID1Q9ULK0 1009 aa9.89□□□□□ -0.83
CHKA-207ENST00000533728 PLLPQ9Y342 182 aa9.89□□□□□ -0.83
CHKA-207ENST00000533728 MYLKQ15746 1914 aa9.89□□□□□ -0.83
CHKA-207ENST00000533728 LCHNA4D1U4 455 aa9.88□□□□□ -0.83
CHKA-207ENST00000533728 CASTOR2A6NHX0 329 aa9.88□□□□□ -0.83
CHKA-207ENST00000533728 SYN3O14994 580 aa9.88□□□□□ -0.83
CHKA-207ENST00000533728 FGF10O15520 208 aaPredicted RBP9.88□□□□□ -0.83
CHKA-207ENST00000533728 MGRN1O60291 552 aa9.88□□□□□ -0.83
CHKA-207ENST00000533728 MGEA5O60502 916 aa9.88□□□□□ -0.83
CHKA-207ENST00000533728 AVILO75366 819 aa9.88□□□□□ -0.83
CHKA-207ENST00000533728 RFPL1O75677 317 aa9.88□□□□□ -0.83
CHKA-207ENST00000533728 B3GAT3O94766 335 aa9.88□□□□□ -0.83
CHKA-207ENST00000533728 OAZ2O95190 189 aa9.88□□□□□ -0.83
CHKA-207ENST00000533728 USP17L7P0C7H9 530 aa9.88□□□□□ -0.83
CHKA-207ENST00000533728 ADRA1DP25100 572 aa9.88□□□□□ -0.83
CHKA-207ENST00000533728 PTPN3P26045 913 aa9.88□□□□□ -0.83
CHKA-207ENST00000533728 HNRNPH1P31943 449 aaKnown RBP9.88□□□□□ -0.83
CHKA-207ENST00000533728 GARSP41250 739 aaKnown RBP9.88□□□□□ -0.83
CHKA-207ENST00000533728 RASSF2P50749 326 aa9.88□□□□□ -0.83
CHKA-207ENST00000533728 NCALDP61601 193 aa9.88□□□□□ -0.83
CHKA-207ENST00000533728 PITX1P78337 314 aaPredicted RBP9.88□□□□□ -0.83
CHKA-207ENST00000533728 RING1Q06587 406 aa9.88□□□□□ -0.83
CHKA-207ENST00000533728 DSC1Q08554 894 aa9.88□□□□□ -0.83
CHKA-207ENST00000533728 MGAT5Q09328 741 aa9.88□□□□□ -0.83
CHKA-207ENST00000533728 AP1B1Q10567 949 aa9.88□□□□□ -0.83
CHKA-207ENST00000533728 NME3Q13232 169 aa9.88□□□□□ -0.83
CHKA-207ENST00000533728 SMAD4Q13485 552 aaKnown RBP9.88□□□□□ -0.83
CHKA-207ENST00000533728 ZKSCAN8Q15776 578 aaPredicted RBP9.88□□□□□ -0.83
CHKA-207ENST00000533728 NFE2Q16621 373 aaPredicted RBP9.88□□□□□ -0.83
CHKA-207ENST00000533728 INSCQ1MX18 579 aa9.88□□□□□ -0.83
CHKA-207ENST00000533728 SPRED3Q2MJR0 410 aa9.88□□□□□ -0.83
CHKA-207ENST00000533728 PPM1JQ5JR12 505 aa9.88□□□□□ -0.83
CHKA-207ENST00000533728 FAXCQ5TGI0 409 aa9.88□□□□□ -0.83
CHKA-207ENST00000533728 BSPRYQ5W0U4 402 aa9.88□□□□□ -0.83
CHKA-207ENST00000533728 ATG16L1Q676U5 607 aa9.88□□□□□ -0.83
CHKA-207ENST00000533728 KCTD11Q693B1 232 aa9.88□□□□□ -0.83
CHKA-207ENST00000533728 MSANTD2Q6P1R3 559 aa9.88□□□□□ -0.83
CHKA-207ENST00000533728 TRAF7Q6Q0C0 670 aa9.88□□□□□ -0.83
CHKA-207ENST00000533728 DENND5BQ6ZUT9 1274 aa9.88□□□□□ -0.83
CHKA-207ENST00000533728 PRPF39Q86UA1 669 aaKnown RBP9.88□□□□□ -0.83
CHKA-207ENST00000533728 CTAGE3PQ8IX95 158 aa9.88□□□□□ -0.83
CHKA-207ENST00000533728 DCP1BQ8IZD4 617 aaKnown RBP9.88□□□□□ -0.83
CHKA-207ENST00000533728 CRIPAKQ8N1N5 446 aa9.88□□□□□ -0.83
CHKA-207ENST00000533728 ARHGAP18Q8N392 663 aa9.88□□□□□ -0.83
CHKA-207ENST00000533728 TAB3Q8N5C8 712 aaPredicted RBP9.88□□□□□ -0.83
CHKA-207ENST00000533728 URGCPQ8TCY9 931 aa9.88□□□□□ -0.83
CHKA-207ENST00000533728 INPP5DQ92835 1189 aa9.88□□□□□ -0.83
CHKA-207ENST00000533728 ISL2Q96A47 359 aa9.88□□□□□ -0.83
CHKA-207ENST00000533728 VWCEQ96DN2 955 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms